RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SPINK8P0C7L1 97 aa19.56■□□□□ 0.72
VEGFA-211ENST00000476772 SLC25A34Q6PIV7 304 aa19.56■□□□□ 0.72
VEGFA-211ENST00000476772 PRR34Q9NV39 138 aa19.56■□□□□ 0.72
VEGFA-211ENST00000476772 H3BRM9 83 aa19.55■□□□□ 0.72
VEGFA-211ENST00000476772 CSMD3Q7Z407 3707 aa19.54■□□□□ 0.72
VEGFA-211ENST00000476772 CCL25O15444 150 aa19.54■□□□□ 0.72
VEGFA-211ENST00000476772 DDTP30046 118 aa19.54■□□□□ 0.72
VEGFA-211ENST00000476772 TRAV8-3A0A0A6YYJ7 113 aa19.53■□□□□ 0.72
VEGFA-211ENST00000476772 DNAH10OSP0CZ25 163 aa19.52■□□□□ 0.72
VEGFA-211ENST00000476772 XCL1P47992 114 aa19.52■□□□□ 0.72
VEGFA-211ENST00000476772 ENHOQ6UWT2 76 aa19.52■□□□□ 0.72
VEGFA-211ENST00000476772 BOD1L2Q8IYS8 172 aa19.52■□□□□ 0.72
VEGFA-211ENST00000476772 TSPEAR-AS2P59090 65 aa19.52■□□□□ 0.71
VEGFA-211ENST00000476772 UPK3BQ9BT76 320 aa19.52■□□□□ 0.71
VEGFA-211ENST00000476772 IGLV10-54A0A075B6I4 117 aa19.51■□□□□ 0.71
VEGFA-211ENST00000476772 IGHV3OR16-9A0A0B4J2B5 98 aa19.51■□□□□ 0.71
VEGFA-211ENST00000476772 SIVA1O15304 175 aa19.51■□□□□ 0.71
VEGFA-211ENST00000476772 IGHV1-58A0A0C4DH39 117 aa19.5■□□□□ 0.71
VEGFA-211ENST00000476772 LEPROTO15243 131 aa19.5■□□□□ 0.71
VEGFA-211ENST00000476772 CRPP02741 224 aa19.5■□□□□ 0.71
VEGFA-211ENST00000476772 MAPKAPK5-AS1Q8N8E1 139 aa19.5■□□□□ 0.71
VEGFA-211ENST00000476772 UBE2WQ96B02 151 aa19.5■□□□□ 0.71
VEGFA-211ENST00000476772 CHCHD10Q8WYQ3 142 aaPredicted RBP19.49■□□□□ 0.71
VEGFA-211ENST00000476772 ZFAND6Q6FIF0 208 aa19.49■□□□□ 0.71
VEGFA-211ENST00000476772 SMIM1B2RUZ4 78 aa19.48■□□□□ 0.71
VEGFA-211ENST00000476772 J3QQQ9 107 aa19.47■□□□□ 0.71
VEGFA-211ENST00000476772 DLEU1O43261 78 aa19.47■□□□□ 0.71
VEGFA-211ENST00000476772 PLECQ15149 4684 aaKnown RBP19.46■□□□□ 0.71
VEGFA-211ENST00000476772 C5orf38Q86SI9 138 aa19.46■□□□□ 0.71
VEGFA-211ENST00000476772 PLEKHB2Q96CS7 222 aa19.46■□□□□ 0.71
VEGFA-211ENST00000476772 STARD9Q9P2P6 4700 aa19.46■□□□□ 0.71
VEGFA-211ENST00000476772 HNRNPA3P51991 378 aaKnown RBP19.46■□□□□ 0.71
VEGFA-211ENST00000476772 LGALS3P17931 250 aaKnown RBP19.45■□□□□ 0.7
VEGFA-211ENST00000476772 CD164L2Q6UWJ8 174 aa19.45■□□□□ 0.7
VEGFA-211ENST00000476772 UBE2DNLQ8IWF7 75 aa19.45■□□□□ 0.7
VEGFA-211ENST00000476772 A0A087WZ39 114 aa19.44■□□□□ 0.7
VEGFA-211ENST00000476772 IGLV5-39A0A0G2JS06 123 aa19.44■□□□□ 0.7
VEGFA-211ENST00000476772 MYMXA0A1B0GTQ4 84 aa19.43■□□□□ 0.7
VEGFA-211ENST00000476772 ZNF815PA8K554 130 aa19.43■□□□□ 0.7
VEGFA-211ENST00000476772 LINC00587B1AMM8 73 aa19.43■□□□□ 0.7
VEGFA-211ENST00000476772 MIAQ16674 131 aa19.43■□□□□ 0.7
VEGFA-211ENST00000476772 Q9H8V8 135 aa19.43■□□□□ 0.7
VEGFA-211ENST00000476772 C2orf91Q6ZV80 131 aa19.42■□□□□ 0.7
VEGFA-211ENST00000476772 TRAV8-4A0A0B4J246 113 aa19.41■□□□□ 0.7
VEGFA-211ENST00000476772 MUC7Q8TAX7 377 aa19.41■□□□□ 0.7
VEGFA-211ENST00000476772 FOXI1Q12951 378 aa19.4■□□□□ 0.7
VEGFA-211ENST00000476772 GAGE12HA6NDE8 117 aa19.4■□□□□ 0.7
VEGFA-211ENST00000476772 LYSTQ99698 3801 aa19.39■□□□□ 0.69
VEGFA-211ENST00000476772 COX7A2LO14548 114 aa19.37■□□□□ 0.69
VEGFA-211ENST00000476772 CTAG1AP78358 180 aa19.36■□□□□ 0.69
VEGFA-211ENST00000476772 WWC2-AS2Q96NR7 200 aa19.36■□□□□ 0.69
VEGFA-211ENST00000476772 IBA57-AS1B1ANH7 110 aa19.35■□□□□ 0.69
VEGFA-211ENST00000476772 LINC01561Q8N1V8 128 aa19.35■□□□□ 0.69
VEGFA-211ENST00000476772 NDUFA12Q9UI09 145 aa19.34■□□□□ 0.69
VEGFA-211ENST00000476772 KRTAP26-1Q6PEX3 210 aa19.33■□□□□ 0.69
VEGFA-211ENST00000476772 C10orf126Q8N4M7 172 aa19.33■□□□□ 0.69
VEGFA-211ENST00000476772 Q9HAA7 133 aa19.33■□□□□ 0.69
VEGFA-211ENST00000476772 TOMM7Q9P0U1 55 aa19.33■□□□□ 0.68
VEGFA-211ENST00000476772 COX7B2Q8TF08 81 aa19.32■□□□□ 0.68
VEGFA-211ENST00000476772 C1orf43Q9BWL3 253 aa19.32■□□□□ 0.68
VEGFA-211ENST00000476772 MALP21145 153 aa19.31■□□□□ 0.68
VEGFA-211ENST00000476772 SCGB1D4Q6XE38 83 aa19.31■□□□□ 0.68
VEGFA-211ENST00000476772 HIGD1BQ9P298 99 aa19.31■□□□□ 0.68
VEGFA-211ENST00000476772 DNAH1Q9P2D7 4330 aa19.31■□□□□ 0.68
VEGFA-211ENST00000476772 TGP01266 2768 aa19.31■□□□□ 0.68
VEGFA-211ENST00000476772 IGKV2D-24A0A075B6R9 120 aa19.3■□□□□ 0.68
VEGFA-211ENST00000476772 NDUFA1O15239 70 aa19.28■□□□□ 0.68
VEGFA-211ENST00000476772 ORAOV1Q8WV07 137 aa19.27■□□□□ 0.67
VEGFA-211ENST00000476772 KRTAP1-5Q9BYS1 174 aa19.27■□□□□ 0.67
VEGFA-211ENST00000476772 K7EP13 123 aa19.26■□□□□ 0.67
VEGFA-211ENST00000476772 A0A0J9YXY3 114 aa19.25■□□□□ 0.67
VEGFA-211ENST00000476772 ZNF625Q96I27 306 aaPredicted RBP19.25■□□□□ 0.67
VEGFA-211ENST00000476772 Q8IZM0 81 aa19.24■□□□□ 0.67
VEGFA-211ENST00000476772 TENM2Q9NT68 2774 aa19.23■□□□□ 0.67
VEGFA-211ENST00000476772 APOMO95445 188 aa19.23■□□□□ 0.67
VEGFA-211ENST00000476772 PRSS2P07478 247 aa19.22■□□□□ 0.67
VEGFA-211ENST00000476772 VPS13DQ5THJ4 4388 aa19.22■□□□□ 0.67
VEGFA-211ENST00000476772 C6orf226Q5I0X4 101 aa19.21■□□□□ 0.67
VEGFA-211ENST00000476772 HINT1P49773 126 aaPredicted RBP19.2■□□□□ 0.66
VEGFA-211ENST00000476772 KIAA0087Q14695 138 aa19.2■□□□□ 0.66
VEGFA-211ENST00000476772 HSD52Q0P140 79 aa19.2■□□□□ 0.66
VEGFA-211ENST00000476772 RMI2Q96E14 147 aa19.19■□□□□ 0.66
VEGFA-211ENST00000476772 CASC10Q5T4H9 136 aa19.18■□□□□ 0.66
VEGFA-211ENST00000476772 SNHG12Q9BXW3 62 aa19.18■□□□□ 0.66
VEGFA-211ENST00000476772 SPAG11BQ08648 103 aa19.17■□□□□ 0.66
VEGFA-211ENST00000476772 EREGO14944 169 aa19.17■□□□□ 0.66
VEGFA-211ENST00000476772 HERV-K104P63124 156 aa19.17■□□□□ 0.66
VEGFA-211ENST00000476772 CFAP161Q6P656 301 aa19.17■□□□□ 0.66
VEGFA-211ENST00000476772 HIST1H4GQ99525 98 aa19.17■□□□□ 0.66
VEGFA-211ENST00000476772 M0R143 59 aa19.16■□□□□ 0.66
VEGFA-211ENST00000476772 BATFQ16520 125 aa19.16■□□□□ 0.66
VEGFA-211ENST00000476772 NBDYA0A0U1RRE5 68 aa19.15■□□□□ 0.66
VEGFA-211ENST00000476772 C2orf82Q6UX34 121 aa19.15■□□□□ 0.66
VEGFA-211ENST00000476772 LITAFQ99732 161 aa19.15■□□□□ 0.66
VEGFA-211ENST00000476772 SPANXB1Q9NS25 103 aaPredicted RBP19.15■□□□□ 0.66
VEGFA-211ENST00000476772 TTC32Q5I0X7 151 aa19.14■□□□□ 0.66
VEGFA-211ENST00000476772 BVES-AS1Q5T3Y7 98 aa19.14■□□□□ 0.66
VEGFA-211ENST00000476772 C15orf56Q8N910 161 aa19.14■□□□□ 0.66
VEGFA-211ENST00000476772 LINC00526Q96FQ7 95 aa19.14■□□□□ 0.65
VEGFA-211ENST00000476772 TMEM238C9JI98 176 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms