RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 VCYO14598 125 aa9.01□□□□□ -0.97
HDAC6-214ENST00000465269 COTL1Q14019 142 aa9.01□□□□□ -0.97
HDAC6-214ENST00000465269 C1orf137Q5JT78 98 aa9.01□□□□□ -0.97
HDAC6-214ENST00000465269 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
HDAC6-214ENST00000465269 C20orf78Q9BR46 151 aa9.01□□□□□ -0.97
HDAC6-214ENST00000465269 COLCA2A8K830 154 aa9□□□□□ -0.97
HDAC6-214ENST00000465269 TMEM97Q5BJF2 176 aa9□□□□□ -0.97
HDAC6-214ENST00000465269 GVQW2A0A096LPI5 108 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-214ENST00000465269 TRBV27A0A0K0K1C4 114 aa8.99□□□□□ -0.97
HDAC6-214ENST00000465269 TSHBP01222 138 aa8.99□□□□□ -0.97
HDAC6-214ENST00000465269 AMTP48728 403 aa8.99□□□□□ -0.97
HDAC6-214ENST00000465269 ALKBH7Q9BT30 221 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-214ENST00000465269 LINC00474Q9P2X8 69 aa8.99□□□□□ -0.97
HDAC6-214ENST00000465269 TSPAN13O95857 204 aa8.98□□□□□ -0.97
HDAC6-214ENST00000465269 FCER1GP30273 86 aa8.98□□□□□ -0.97
HDAC6-214ENST00000465269 SMIM2Q9BVW6 85 aa8.98□□□□□ -0.97
HDAC6-214ENST00000465269 MAP1LC3AQ9H492 121 aa8.98□□□□□ -0.97
HDAC6-214ENST00000465269 LAMTOR2Q9Y2Q5 125 aa8.98□□□□□ -0.97
HDAC6-214ENST00000465269 A0A1B0GUV1 79 aa8.97□□□□□ -0.97
HDAC6-214ENST00000465269 PRSS47A8MTI9 375 aa8.97□□□□□ -0.97
HDAC6-214ENST00000465269 TCAPO15273 167 aa8.97□□□□□ -0.97
HDAC6-214ENST00000465269 GAGE2BQ13066 116 aa8.97□□□□□ -0.97
HDAC6-214ENST00000465269 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
HDAC6-214ENST00000465269 KIR2DL4Q99706 377 aa8.97□□□□□ -0.97
HDAC6-214ENST00000465269 TMEM243Q9BU79 118 aa8.97□□□□□ -0.97
HDAC6-214ENST00000465269 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-214ENST00000465269 IGKV2-29A2NJV5 120 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-214ENST00000465269 TRGC2P03986 189 aa8.96□□□□□ -0.98
HDAC6-214ENST00000465269 KRTAP1-4P0C5Y4 121 aa8.96□□□□□ -0.98
HDAC6-214ENST00000465269 RAB5AP20339 215 aa8.96□□□□□ -0.98
HDAC6-214ENST00000465269 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-214ENST00000465269 RPL32P62910 135 aaKnown RBP8.96□□□□□ -0.98
HDAC6-214ENST00000465269 CHCHD10Q8WYQ3 142 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-214ENST00000465269 UBE2L6O14933 153 aa8.95□□□□□ -0.98
HDAC6-214ENST00000465269 PTTG1IPP53801 180 aa8.95□□□□□ -0.98
HDAC6-214ENST00000465269 DIRC1Q969H9 104 aa8.95□□□□□ -0.98
HDAC6-214ENST00000465269 CARD19Q96LW7 228 aa8.95□□□□□ -0.98
HDAC6-214ENST00000465269 H0Y9J4 135 aa8.94□□□□□ -0.98
HDAC6-214ENST00000465269 IGLV7-43P04211 117 aa8.94□□□□□ -0.98
HDAC6-214ENST00000465269 ESDP10768 282 aa8.94□□□□□ -0.98
HDAC6-214ENST00000465269 KRTAP11-1Q8IUC1 163 aa8.94□□□□□ -0.98
HDAC6-214ENST00000465269 Q8N8P6 123 aa8.94□□□□□ -0.98
HDAC6-214ENST00000465269 NXT2Q9NPJ8 142 aaKnown RBP8.93□□□□□ -0.98
HDAC6-214ENST00000465269 IGLV1-50A0A075B6I6 118 aa8.92□□□□□ -0.98
HDAC6-214ENST00000465269 FOXI1Q12951 378 aa8.92□□□□□ -0.98
HDAC6-214ENST00000465269 C9orf116Q5BN46 136 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-214ENST00000465269 RNASEKQ6P5S7 137 aaKnown RBP8.92□□□□□ -0.98
HDAC6-214ENST00000465269 C18orf32Q8TCD1 76 aa8.92□□□□□ -0.98
HDAC6-214ENST00000465269 FGF6P10767 208 aa8.91□□□□□ -0.98
HDAC6-214ENST00000465269 AMMECR1LQ6DCA0 310 aa8.91□□□□□ -0.98
HDAC6-214ENST00000465269 H7C423 109 aa8.9□□□□□ -0.98
HDAC6-214ENST00000465269 UBE2D1P51668 147 aa8.9□□□□□ -0.98
HDAC6-214ENST00000465269 RPL39P62891 51 aaKnown RBP8.9□□□□□ -0.98
HDAC6-214ENST00000465269 FA2HQ7L5A8 372 aa8.9□□□□□ -0.98
HDAC6-214ENST00000465269 XCL1P47992 114 aa8.89□□□□□ -0.99
HDAC6-214ENST00000465269 SYCNQ0VAF6 134 aa8.89□□□□□ -0.99
HDAC6-214ENST00000465269 TMEM18Q96B42 140 aa8.89□□□□□ -0.99
HDAC6-214ENST00000465269 ORMDL2Q53FV1 153 aa8.88□□□□□ -0.99
HDAC6-214ENST00000465269 URB1-AS1Q96HZ7 61 aa8.88□□□□□ -0.99
HDAC6-214ENST00000465269 TMEM101Q96IK0 257 aa8.88□□□□□ -0.99
HDAC6-214ENST00000465269 K7EMI3 77 aa8.87□□□□□ -0.99
HDAC6-214ENST00000465269 LINC00614P0C842 121 aa8.87□□□□□ -0.99
HDAC6-214ENST00000465269 OR5A1Q8NGJ0 315 aa8.87□□□□□ -0.99
HDAC6-214ENST00000465269 UBE2D4Q9Y2X8 147 aa8.87□□□□□ -0.99
HDAC6-214ENST00000465269 A0A087WZ39 114 aa8.86□□□□□ -0.99
HDAC6-214ENST00000465269 LOC107984640A0A0U1RRK4 108 aa8.86□□□□□ -0.99
HDAC6-214ENST00000465269 LINC01546A6NGU7 62 aa8.86□□□□□ -0.99
HDAC6-214ENST00000465269 C2orf66Q6UXQ4 117 aa8.86□□□□□ -0.99
HDAC6-214ENST00000465269 BAGE3Q86Y29 109 aa8.86□□□□□ -0.99
HDAC6-214ENST00000465269 OPRPNQ99935 248 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-214ENST00000465269 RETNLBQ9BQ08 111 aa8.86□□□□□ -0.99
HDAC6-214ENST00000465269 ZNF25P17030 456 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-214ENST00000465269 RAB5BP61020 215 aa8.85□□□□□ -0.99
HDAC6-214ENST00000465269 RNASE13Q5GAN3 156 aaKnown RBP8.85□□□□□ -0.99
HDAC6-214ENST00000465269 MRPL52Q86TS9 123 aaKnown RBP8.85□□□□□ -0.99
HDAC6-214ENST00000465269 CDC42SE2Q9NRR3 84 aa8.85□□□□□ -0.99
HDAC6-214ENST00000465269 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
HDAC6-214ENST00000465269 PKIGQ9Y2B9 76 aa8.85□□□□□ -0.99
HDAC6-214ENST00000465269 IGHV1-58A0A0C4DH39 117 aa8.84□□□□□ -0.99
HDAC6-214ENST00000465269 CCL25O15444 150 aa8.84□□□□□ -0.99
HDAC6-214ENST00000465269 SMAGPQ0VAQ4 97 aa8.84□□□□□ -0.99
HDAC6-214ENST00000465269 PMCHL1Q16048 86 aa8.84□□□□□ -0.99
HDAC6-214ENST00000465269 TIMM21Q9BVV7 248 aa8.84□□□□□ -0.99
HDAC6-214ENST00000465269 FAM168BA1KXE4 195 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BKO60814 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BJP06899 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BOP23527 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 G0S2P27469 103 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BBP33778 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BDP58876 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BCP62807 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 RPL18AQ02543 176 aaKnown RBP8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST2H2BEQ16778 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.83□□□□□ -1
HDAC6-214ENST00000465269 Q6ZUT4 128 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BHQ93079 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 TOMM6Q96B49 74 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BNQ99877 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 HIST1H2BMQ99879 126 aa8.83□□□□□ -1
HDAC6-214ENST00000465269 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms