RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 C6orf201Q7Z4U5 140 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 ACBD7Q8N6N7 88 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 DYNLRB2Q8TF09 96 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 LCN9Q8WX39 176 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 ANP32BQ92688 251 aaKnown RBP-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 TSLPQ969D9 159 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 SPTSSAQ969W0 71 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 C12orf57Q99622 126 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 DPY30Q9C005 99 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 C2CD3Q4AC94 2353 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 CELSR3Q9NYQ7 3312 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 PTPRMP28827 1452 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 GAPVD1Q14C86 1478 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 TEX14Q8IWB6 1497 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 NLRP1Q9C000 1473 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 EPG5Q9HCE0 2579 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 KMT2CQ8NEZ4 4911 aaKnown RBP-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 PSME4Q14997 1843 aa-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 VIRMAQ69YN4 1812 aaKnown RBP-0.17□□□□□ -2.44
PFDN4-202ENST00000441080 CUX1P39880 1505 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ARHGEF10O15013 1369 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 COL6A3P12111 3177 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 SPTBN2O15020 2390 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 NRXN2Q9P2S2 1712 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 IFT172Q9UG01 1749 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 KIAA0100Q14667 2235 aaKnown RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 SSC5DA1L4H1 1573 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ADGRB1O14514 1584 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 CLIP1P30622 1438 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ANKRD36CQ5JPF3 1778 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 LOC100130705A0A1B0GUX0 176 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 IGLC7A0M8Q6 106 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 I3L2K1 104 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 K7ERU9 68 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 TNFSF15O95150 251 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 MT1AP04731 61 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 MT1BP07438 61 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 SCTP09683 121 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ARMS2P0C7Q2 107 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 SAA2P0DJI9 122 aaPredicted RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 TPPP2P59282 170 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 GNG11P61952 73 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 NCS1P62166 190 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 MT1HP80294 61 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 HSD52Q0P140 79 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 KRTAP19-5Q3LI72 72 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 SPANXN1Q5VSR9 72 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 C5orf38Q86SI9 138 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ATP6V0E2Q8NHE4 81 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 MYOZ3Q8TDC0 251 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 GAFA1Q96PS6 74 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 TSC22D3Q99576 134 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 WFDC6Q9BQY6 131 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 PDCD10Q9BUL8 212 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 DYNLRB1Q9NP97 96 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 NOP10Q9NPE3 64 aaKnown RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 NXT2Q9NPJ8 142 aaKnown RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 LSM2Q9Y333 95 aaKnown RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 MAP1AP78559 2803 aaPredicted RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.18□□□□□ -2.444e-11■■■■□ 19.9
PFDN4-202ENST00000441080 CSPG4Q6UVK1 2322 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ERVK-7P63135 1459 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 ABCC10Q5T3U5 1492 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 SHANK2Q9UPX8 1470 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 PARP14Q460N5 1801 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 SBF2Q86WG5 1849 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 PATJQ8NI35 1801 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 KIF13AQ9H1H9 1805 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 LRP2P98164 4655 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 POLQO75417 2590 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 GVINP1Q7Z2Y8 2422 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 XRN1Q8IZH2 1706 aaKnown RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 URB1O60287 2271 aaKnown RBP-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 HERC2O95714 4834 aa-0.18□□□□□ -2.44
PFDN4-202ENST00000441080 MYH7P12883 1935 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 RIF1Q5UIP0 2472 aaKnown RBP-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 PKD1L2Q7Z442 2459 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 IBTKQ9P2D0 1353 aaPredicted RBP-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 ITPR3Q14573 2671 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 HMCN2Q8NDA2 5059 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 KDM5CP41229 1560 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 ADAMTS12P58397 1594 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 AKAP6Q13023 2319 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 PAPPA2Q9BXP8 1791 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 CHD6Q8TD26 2715 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 DISP2A7MBM2 1401 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 UACAQ9BZF9 1416 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 RRBP1Q9P2E9 1410 aaKnown RBP-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 NCOA3Q9Y6Q9 1424 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MYO18BQ8IUG5 2567 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 KIAA0556O60303 1618 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 WNK3Q9BYP7 1800 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 EYSQ5T1H1 3165 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 MED13LQ71F56 2210 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 FAT1Q14517 4588 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 PKD1L1Q8TDX9 2849 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 TRAV13-2A0A0B4J235 113 aa-0.19□□□□□ -2.44
PFDN4-202ENST00000441080 TRAV21A0A0B4J279 112 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms