RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 PNMA8CA0A1B0GUJ8 204 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 C20orf202A1L168 122 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 GABARAPH6UMI1 98 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 GPR31O00270 319 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 CTXN2P0C2S0 81 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 OR4E1P0C645 316 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 RPL7P18124 248 aaKnown RBP1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 CASQ1P31415 396 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 PIGPP57054 158 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 RPS20P60866 119 aaKnown RBP1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 FABP5Q01469 135 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 SLC38A11Q08AI6 406 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 JOSD1Q15040 202 aaPredicted RBP1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 HSP90B2PQ58FF3 399 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 COQ5Q5HYK3 327 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 OR13C8Q8NGS7 320 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 ASB13Q8WXK3 278 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 SFRP2Q96HF1 295 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 ODF3Q96PU9 254 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 TMEM147Q9BVK8 224 aa1.13□□□□□ -2.23
HMGB3P12-201ENST00000438745 TMSB15BA0A087X1C1 80 aa1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 C9orf92A6NGG3 77 aa1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 GNGT2O14610 69 aa1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 RPL28P46779 137 aaKnown RBP1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 FXYD4P59646 89 aa1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 KRTAP26-1Q6PEX3 210 aa1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 FAM19A5Q7Z5A7 132 aaPredicted RBP1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 IFT20Q8IY31 132 aa1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 OR2T35Q8NGX2 323 aa1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 PRO2289Q9P1D8 64 aa1.12□□□□□ -2.23
HMGB3P12-201ENST00000438745 IGKV3OR2-268A0A0C4DH90 116 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 FAM236DA0A1B0GTK5 79 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 CFDP00746 253 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 FAM236CP0DP71 79 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 BCL2P10415 239 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 GTF2A1P52655 376 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 PPP1R1AQ13522 171 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 MSMO1Q15800 293 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 HSD17B12Q53GQ0 312 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 CFAP126Q5VTH2 177 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 LCN15Q6UWW0 184 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 S100A7AQ86SG5 101 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 ACBD7Q8N6N7 88 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 BORCS5Q969J3 196 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 SMIM19Q96E16 107 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 LINC00526Q96FQ7 95 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 PACRGQ96M98 296 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 LPAR5Q9H1C0 372 aa1.11□□□□□ -2.23
HMGB3P12-201ENST00000438745 TRBV20-1A0A075B6N2 111 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 GVQW2A0A096LPI5 108 aaPredicted RBP1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 TRBV6-8A0A0A6YYG3 113 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 DUXBA0A1W2PPF3 345 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 RBAKDNA6NC62 111 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 FAM24AA6NFZ4 105 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 CEBPZOSA8MTT3 80 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 NUPR1O60356 82 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 PPYP01298 95 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 OR5G3P0C626 314 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 LINC00694P0DN24 101 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 S100GP29377 79 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 MT4P47944 62 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 TMEM258P61165 79 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 SURF2Q15527 256 aaPredicted RBP1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 TMEM78Q5T7P6 136 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 RPL22L1Q6P5R6 122 aaKnown RBP1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 ZNF818PQ6ZRF7 136 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 SMCR5Q8TEV8 140 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 HOPXQ9BPY8 73 aaPredicted RBP1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 NPVFQ9HCQ7 196 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 SPANXB1Q9NS25 103 aaPredicted RBP1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 FGFR1OP2Q9NVK5 253 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 NKIRAS1Q9NYS0 192 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 HIGD1AQ9Y241 93 aa1.1□□□□□ -2.23
HMGB3P12-201ENST00000438745 AHNAKQ09666 5890 aaKnown RBP1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 FXYD6-FXYD2A0A087WZ82 144 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 A0A0A6YYH2 397 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 A0A0G2JND7 137 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 IGKV2-29A2NJV5 120 aaPredicted RBP1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 A6NJ64 397 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 A8MUN3 132 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 PGLYRP1O75594 196 aaPredicted RBP1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 APOMO95445 188 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 SPINK1P00995 79 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 NPYP01303 97 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 TYMSP04818 313 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 UCHL1P09936 223 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 CDC34P49427 236 aaPredicted RBP1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 TAS2R20P59543 309 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 S100A10P60903 97 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 UBE2D2P62837 147 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 Q6ZS49 121 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 CCDC90BQ9GZT6 254 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 PXMP4Q9Y6I8 212 aa1.09□□□□□ -2.23
HMGB3P12-201ENST00000438745 TRBV25-1A0A075B6N4 114 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 IGHV1-58A0A0C4DH39 117 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 HYPMO75409 117 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 IGKV1-5P01602 117 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 NMBP08949 121 aa1.08□□□□□ -2.24
HMGB3P12-201ENST00000438745 HIST1H1EP10412 219 aaKnown RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms