RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 UBE2G2P60604 165 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 NDUFA12Q9UI09 145 aa3.24□□□□□ -1.89
LMBR1-204ENST00000415428 FAM168BA1KXE4 195 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 GHRHP01286 108 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 TAGLN2P37802 199 aaKnown RBP3.23□□□□□ -1.89
LMBR1-204ENST00000415428 SPAG11BQ08648 103 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 PNRC1Q12796 327 aaPredicted RBP3.23□□□□□ -1.89
LMBR1-204ENST00000415428 AMN1Q8IY45 258 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 LINC00337Q8N6G1 96 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 TMEM191AQ9H0A3 160 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 LSM3P62310 102 aaKnown RBP3.23□□□□□ -1.89
LMBR1-204ENST00000415428 H2AFB2P0C5Z0 115 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 PYDC2Q56P42 97 aa3.23□□□□□ -1.89
LMBR1-204ENST00000415428 SSTP61278 116 aa3.22□□□□□ -1.89
LMBR1-204ENST00000415428 CCL20P78556 96 aa3.22□□□□□ -1.89
LMBR1-204ENST00000415428 DAND5Q8N907 189 aa3.22□□□□□ -1.89
LMBR1-204ENST00000415428 THAP6Q8TBB0 222 aa3.22□□□□□ -1.89
LMBR1-204ENST00000415428 XKRY2A2RUG3 117 aa3.22□□□□□ -1.89
LMBR1-204ENST00000415428 SMIM17P0DL12 118 aa3.22□□□□□ -1.89
LMBR1-204ENST00000415428 MANBALQ9NQG1 85 aa3.21□□□□□ -1.89
LMBR1-204ENST00000415428 SNRPCP09234 159 aaKnown RBP3.21□□□□□ -1.9
LMBR1-204ENST00000415428 NKX2-5P52952 324 aaPredicted RBP3.21□□□□□ -1.9
LMBR1-204ENST00000415428 ZNF345Q14585 488 aa3.21□□□□□ -1.9
LMBR1-204ENST00000415428 FAM74A4Q5TZK3 123 aa3.21□□□□□ -1.9
LMBR1-204ENST00000415428 ZNF727A8MUV8 499 aa3.21□□□□□ -1.9
LMBR1-204ENST00000415428 GAGE2BQ13066 116 aa3.21□□□□□ -1.9
LMBR1-204ENST00000415428 UMAD1C9J7I0 102 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 IFNA1P01562 189 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 COX17Q14061 63 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 C10orf25Q5T742 122 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 PLEKHB2Q96CS7 222 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 A0A1B0GW15 77 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 SPANXN1Q5VSR9 72 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 AMMECR1LQ6DCA0 310 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 PPP1R1CQ8WVI7 109 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 VCYO14598 125 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 CLPSL2Q6UWE3 100 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 TMEM18Q96B42 140 aa3.2□□□□□ -1.9
LMBR1-204ENST00000415428 SDHAF1A6NFY7 115 aa3.19□□□□□ -1.9
LMBR1-204ENST00000415428 SFTA2Q6UW10 78 aa3.19□□□□□ -1.9
LMBR1-204ENST00000415428 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
LMBR1-204ENST00000415428 GRIFINA4D1Z8 144 aa3.19□□□□□ -1.9
LMBR1-204ENST00000415428 MT1FP04733 61 aa3.19□□□□□ -1.9
LMBR1-204ENST00000415428 TMEM238C9JI98 176 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 LYZL1Q6UWQ5 148 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
LMBR1-204ENST00000415428 M0R378 163 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 AKR1C3P42330 323 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 UBE2G1P62253 170 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 TRIQKQ629K1 86 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 LINC00862A6NCI5 91 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 PRYO14603 147 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 RGS5O15539 181 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 SMCPP49901 116 aaPredicted RBP3.18□□□□□ -1.9
LMBR1-204ENST00000415428 FA2HQ7L5A8 372 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
LMBR1-204ENST00000415428 VPREB1P12018 145 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 DPH3Q96FX2 82 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 S100A5P33763 92 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 PDZD11Q5EBL8 140 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 BTF3L4Q96K17 158 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 IGKV2D-26A0A0A0MRZ7 120 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 LINC01549A6NIU2 74 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 PDE6DO43924 150 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 XCL1P47992 114 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 LAMTOR2Q9Y2Q5 125 aa3.17□□□□□ -1.9
LMBR1-204ENST00000415428 GIPP09681 153 aaPredicted RBP3.16□□□□□ -1.9
LMBR1-204ENST00000415428 Q75L30 129 aa3.16□□□□□ -1.9
LMBR1-204ENST00000415428 KCNQ1DNQ9H478 68 aa3.16□□□□□ -1.9
LMBR1-204ENST00000415428 ST20Q9HBF5 79 aa3.16□□□□□ -1.9
LMBR1-204ENST00000415428 RAB4AP20338 218 aa3.16□□□□□ -1.9
LMBR1-204ENST00000415428 HBBP68871 147 aa3.16□□□□□ -1.9
LMBR1-204ENST00000415428 UNQ6190/PRO20217Q6UXQ8 127 aa3.16□□□□□ -1.9
LMBR1-204ENST00000415428 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
LMBR1-204ENST00000415428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
LMBR1-204ENST00000415428 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
LMBR1-204ENST00000415428 F8VRH5 84 aa3.15□□□□□ -1.9
LMBR1-204ENST00000415428 ALKAL2Q6UX46 152 aa3.15□□□□□ -1.9
LMBR1-204ENST00000415428 Q6ZN92 141 aa3.15□□□□□ -1.9
LMBR1-204ENST00000415428 BAGE2Q86Y30 109 aa3.15□□□□□ -1.9
LMBR1-204ENST00000415428 C3orf22Q8N5N4 141 aa3.15□□□□□ -1.91
LMBR1-204ENST00000415428 RAB5CP51148 216 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 ANKRD39Q53RE8 183 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 MAP1LC3B2A6NCE7 125 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 MALP21145 153 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 C10orf91Q5T1B1 145 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 MAP1LC3BQ9GZQ8 125 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 Q6ZUT4 128 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 FAM19A5Q7Z5A7 132 aaPredicted RBP3.14□□□□□ -1.91
LMBR1-204ENST00000415428 S100ZQ8WXG8 99 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 RPL39LQ96EH5 51 aaKnown RBP3.14□□□□□ -1.91
LMBR1-204ENST00000415428 TMEM126AQ9H061 195 aa3.14□□□□□ -1.91
LMBR1-204ENST00000415428 IGLV5-39A0A0G2JS06 123 aa3.13□□□□□ -1.91
LMBR1-204ENST00000415428 RPL35P42766 123 aaKnown RBP3.13□□□□□ -1.91
LMBR1-204ENST00000415428 SEC11AP67812 179 aa3.13□□□□□ -1.91
LMBR1-204ENST00000415428 KRTAP4-8Q9BYQ9 185 aa3.13□□□□□ -1.91
LMBR1-204ENST00000415428 INMT-MINDY4F8WBC2 141 aa3.13□□□□□ -1.91
LMBR1-204ENST00000415428 TSPAN13O95857 204 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms