RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 INSL3P51460 131 aa3.65□□□□□ -1.83
SMAD4-202ENST00000398417 POLR2KP53803 58 aaKnown RBP3.65□□□□□ -1.83
SMAD4-202ENST00000398417 SDIM1Q6ZPB5 146 aa3.65□□□□□ -1.83
SMAD4-202ENST00000398417 IGKV2-24A0A0C4DH68 120 aa3.65□□□□□ -1.83
SMAD4-202ENST00000398417 CNFNQ9BYD5 112 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 ZNF580Q9UK33 172 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 IGLV4-69A0A075B6H9 119 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 Q6YL49 198 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 C3orf22Q8N5N4 141 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 A0A0J9YY99 117 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 J3QLI3 93 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 ZNF575Q86XF7 245 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 KIF25-AS1Q9Y6Z4 181 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 TMEM223A0PJW6 202 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 JMJD7-PLA2G4BH0Y9G9 81 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 HILS1P60008 231 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 AKAP13Q12802 2813 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 IGHV4-31P0DP07 118 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 GATA3P23771 443 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 LINC00315P59091 139 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 SERP2Q8N6R1 65 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 CDIP1Q9H305 208 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 MAP6D1Q9H9H5 199 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 PKD1L2Q7Z442 2459 aa3.64□□□□□ -1.83
SMAD4-202ENST00000398417 M0QY20 66 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 C9orf85Q96MD7 179 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 KLLNB2CW77 178 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 PRO1854Q9UHT4 67 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 RPL36ALQ969Q0 106 aaKnown RBP3.63□□□□□ -1.83
SMAD4-202ENST00000398417 IGLV4-3A0A075B6K6 122 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 LINC01546A6NGU7 62 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 RHOHQ15669 191 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 DCANP1Q8TF63 244 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 IGIPA6NJ69 53 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 NDUFA11Q86Y39 141 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 ASH1LQ9NR48 2969 aaKnown RBP3.63□□□□□ -1.83
SMAD4-202ENST00000398417 DEFB113Q30KQ7 82 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 C4orf3Q8WVX3 66 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 VSIG2Q96IQ7 327 aa3.63□□□□□ -1.83
SMAD4-202ENST00000398417 IGKV2D-24A0A075B6R9 120 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 TINCRA0A1B0GVN0 87 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 FOXI1Q12951 378 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 PRIMA1Q86XR5 153 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 KLK9Q2XQG4 91 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 Q6ZSN1 163 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 PRO0461Q9UI25 63 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 TRBV6-5A0A0K0K1A5 114 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 LINC01620Q4KN68 170 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 Q6ZUT4 128 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 NXPH4O95158 308 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 ANGP03950 147 aaKnown RBP3.62□□□□□ -1.83
SMAD4-202ENST00000398417 TIRAPP58753 221 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 Q6ZSV7 163 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 ORMDL1Q9P0S3 153 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 NAV2Q8IVL1 2488 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 TRBV30A0A0K0K1B3 111 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 ATP5EP56381 51 aaPredicted RBP3.62□□□□□ -1.83
SMAD4-202ENST00000398417 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
SMAD4-202ENST00000398417 ATOX1O00244 68 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 FAM19A4Q96LR4 140 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 A0A1B0GX51 115 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 LRCOL1A6NCL2 159 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 REG3AQ06141 175 aa3.62□□□□□ -1.83
SMAD4-202ENST00000398417 A0A0J9YWU9 116 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 XCL1P47992 114 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 IGHV3-30P01768 117 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 IGHV3-30-3P0DP02 117 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 IGHV3-30-5P0DP03 117 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 SOSTDC1Q6X4U4 206 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 CLEC2BQ92478 149 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 NOP10Q9NPE3 64 aaKnown RBP3.61□□□□□ -1.83
SMAD4-202ENST00000398417 CSMD3Q7Z407 3707 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 Q6ZTI0 123 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 CR1P17927 2039 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 C16orf74Q96GX8 76 aa3.61□□□□□ -1.83
SMAD4-202ENST00000398417 FAM236DA0A1B0GTK5 79 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 ERC2-IT1O76042 136 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 FAM236CP0DP71 79 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 EPG5Q9HCE0 2579 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 C2orf48Q96LS8 159 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 LINC00467Q9BRT7 94 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 Q9H8V8 135 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 DEFB114Q30KQ6 69 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 C6orf99Q4VX62 202 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 CARD19Q96LW7 228 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 TRBV27A0A0K0K1C4 114 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 REG3GQ6UW15 175 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 ODF3Q96PU9 254 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 MT-ATP8P03928 68 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 CFAP126Q5VTH2 177 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 CHCHD7Q9BUK0 85 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 COL27A1Q8IZC6 1860 aaPredicted RBP3.6□□□□□ -1.83
SMAD4-202ENST00000398417 IGHV1-58A0A0C4DH39 117 aa3.6□□□□□ -1.83
SMAD4-202ENST00000398417 Q9UF83 564 aa3.59□□□□□ -1.83
SMAD4-202ENST00000398417 LOC100131303A0A0U1RQF7 123 aa3.59□□□□□ -1.83
SMAD4-202ENST00000398417 TMEM263Q8WUH6 116 aaKnown RBP3.59□□□□□ -1.83
SMAD4-202ENST00000398417 CDKN2A-AS1Q9UH64 79 aa3.59□□□□□ -1.83
SMAD4-202ENST00000398417 ANKHD1Q8IWZ3 2542 aaKnown RBP3.59□□□□□ -1.83
SMAD4-202ENST00000398417 K7EQD1 137 aa3.59□□□□□ -1.83
SMAD4-202ENST00000398417 ABCA12Q86UK0 2595 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms