RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 IGHV1-24A0A0C4DH33 117 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 MUC21A0A140T8X8 626 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 A0A1B0GVX0 72 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 NDUFC1O43677 76 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 SH2D1AO60880 128 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 IGHV1-46P01743 117 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 HSPB1P04792 205 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 PATE4P0C8F1 98 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 LINC01547P58512 204 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 FUT5Q11128 374 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 CGB2Q6NT52 195 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 BRD3OSQ6XYD6 125 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 DYNAPQ8N1N2 210 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 LINC01600Q96MT4 127 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 SDF2L1Q9HCN8 221 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 ZNF222Q9UK12 451 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 DNAH17Q9UFH2 4485 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 IGHV1-3A0A0C4DH29 117 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 NAP1L6A6NFF2 107 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 C17orf112F2Z3M2 114 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 H3BUT2 72 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 NUPR1O60356 82 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 CPSF4O95639 269 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 CCKP06307 115 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 WFDC2Q14508 124 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 INSL4Q14641 139 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 Q1T7F1 81 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 SPANXN1Q5VSR9 72 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 CEND1Q8N111 149 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 DEFB108BQ8NET1 73 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 GTSF1Q8WW33 167 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 Q96M85 177 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 PRO0461Q9UI25 63 aa2.36□□□□□ -2.03
ECHDC1-205ENST00000368295 DNAH5Q8TE73 4624 aa2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 LECT2O14960 151 aa2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 CREBL2O60519 120 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 SFTA3P0C7M3 94 aa2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 ELOBQ15370 118 aa2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 C15orf56Q8N910 161 aa2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 WFDC9Q8NEX5 89 aa2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 MRPL35Q9NZE8 188 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 TRAPPC1Q9Y5R8 145 aa2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 KIAA2026Q5HYC2 2103 aa2.35□□□□□ -2.03
ECHDC1-205ENST00000368295 DOCK11Q5JSL3 2073 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 TRAV2A0A0B4J234 112 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 A6NDX4 124 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 A8MWP4 228 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 INSP01308 110 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 ACYP1P07311 99 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 CD24P25063 80 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 MPV17P39210 176 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 GNG11P61952 73 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 SNRPFP62306 86 aaKnown RBP2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 LELP1Q5T871 98 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 Q6ZTC4 211 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 Q8N9W7 124 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 RETNLBQ9BQ08 111 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 SLC50A1Q9BRV3 221 aa2.34□□□□□ -2.03
ECHDC1-205ENST00000368295 A0A1W2PQD3 144 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 hDV103S1A0JD37 113 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 A6NED7 52 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 BCE1O60756 84 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 IGKV1D-33P01593 117 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 IGKV1-33P01594 117 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 SUPT4H1P63272 117 aaKnown RBP2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 MPV17LQ2QL34 196 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 ZNF791Q3KP31 576 aaPredicted RBP2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 SDIM1Q6ZPB5 146 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 NTM-AS1Q6ZSK4 140 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 SH2D6Q7Z4S9 175 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 C14orf178Q8N769 122 aaPredicted RBP2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 CST11Q9H112 138 aa2.34□□□□□ -2.04
ECHDC1-205ENST00000368295 IGHV3-73A0A0B4J1V6 119 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 UMAD1C9J7I0 102 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 GNRH2O43555 120 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 LHBP01229 141 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 IGLV1-44P01699 117 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 XCL1P47992 114 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 RHOHQ15669 191 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 C2orf83Q53S99 150 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 TMEM136Q6ZRR5 245 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 OR8B3Q8NGG8 313 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 OR8B2Q96RD0 313 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 SMIM7Q9BQ49 75 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 NXT2Q9NPJ8 142 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 ZNRD1Q9P1U0 126 aa2.33□□□□□ -2.04
ECHDC1-205ENST00000368295 IGHV3-15A0A0B4J1V0 119 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 TRAV40A0A0B4J280 105 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 TMEM223A0PJW6 202 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 H3BMM0 161 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 FXYD2P54710 66 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 SMIM11AP58511 58 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 Q6ZQT7 251 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 LYZL2Q7Z4W2 148 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 SMIM29Q86T20 159 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 Q8NDZ9 215 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 DYNLRB2Q8TF09 96 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 UBE2WQ96B02 151 aa2.32□□□□□ -2.04
ECHDC1-205ENST00000368295 TMEM141Q96I45 108 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms