RNA–Protein interactions for RNA: ENST00000318066.6

UBE2N-201, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2N, Length 5,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-201ENST00000318066 PCDH15Q96QU1 1955 aa13.92□□□□□ -0.18
UBE2N-201ENST00000318066 KIAA1549LQ6ZVL6 1849 aa13.91□□□□□ -0.18
UBE2N-201ENST00000318066 C3orf84H3BNL1 204 aa13.91□□□□□ -0.18
UBE2N-201ENST00000318066 RPL28P46779 137 aaKnown RBP13.91□□□□□ -0.18
UBE2N-201ENST00000318066 NTM-AS1Q6ZSK4 140 aa13.91□□□□□ -0.18
UBE2N-201ENST00000318066 A0A096LNI7 61 aa13.91□□□□□ -0.18
UBE2N-201ENST00000318066 A8MZ25 164 aa13.9□□□□□ -0.18
UBE2N-201ENST00000318066 LINC00474Q9P2X8 69 aa13.9□□□□□ -0.18
UBE2N-201ENST00000318066 POM121L12Q8N7R1 296 aa13.9□□□□□ -0.18
UBE2N-201ENST00000318066 BRI3O95415 125 aa13.9□□□□□ -0.18
UBE2N-201ENST00000318066 CRIP2P52943 208 aaPredicted RBP13.89□□□□□ -0.19
UBE2N-201ENST00000318066 C1orf195Q5TG92 126 aa13.89□□□□□ -0.19
UBE2N-201ENST00000318066 KPRPQ5T749 579 aaPredicted RBP13.88□□□□□ -0.19
UBE2N-201ENST00000318066 CSDC2Q9Y534 153 aaKnown RBP13.88□□□□□ -0.19
UBE2N-201ENST00000318066 LINC00242Q5T6M2 205 aa13.87□□□□□ -0.19
UBE2N-201ENST00000318066 EGFEM1PQ0D2K5 195 aa13.87□□□□□ -0.19
UBE2N-201ENST00000318066 ZNF580Q9UK33 172 aa13.86□□□□□ -0.19
UBE2N-201ENST00000318066 DSCAMO60469 2012 aa13.86□□□□□ -0.19
UBE2N-201ENST00000318066 PRO3102Q9H379 93 aa13.86□□□□□ -0.19
UBE2N-201ENST00000318066 SNURFQ9Y675 71 aa13.86□□□□□ -0.19
UBE2N-201ENST00000318066 SERP1Q9Y6X1 66 aa13.86□□□□□ -0.19
UBE2N-201ENST00000318066 A6NED7 52 aa13.85□□□□□ -0.19
UBE2N-201ENST00000318066 LINC00526Q96FQ7 95 aa13.85□□□□□ -0.19
UBE2N-201ENST00000318066 LINC01006Q8NI28 216 aa13.85□□□□□ -0.19
UBE2N-201ENST00000318066 URB1-AS1Q96HZ7 61 aa13.85□□□□□ -0.19
UBE2N-201ENST00000318066 IGKV2-28A0A075B6P5 120 aa13.84□□□□□ -0.19
UBE2N-201ENST00000318066 F8WDY8 70 aa13.84□□□□□ -0.19
UBE2N-201ENST00000318066 IGKV2D-28P01615 120 aa13.84□□□□□ -0.19
UBE2N-201ENST00000318066 KIAA1549Q9HCM3 1950 aa13.84□□□□□ -0.19
UBE2N-201ENST00000318066 C2CD3Q4AC94 2353 aa13.84□□□□□ -0.19
UBE2N-201ENST00000318066 WFDC13Q8IUB5 93 aa13.84□□□□□ -0.19
UBE2N-201ENST00000318066 LINC00482Q8N8I6 264 aa13.84□□□□□ -0.19
UBE2N-201ENST00000318066 C10orf99Q6UWK7 81 aa13.83□□□□□ -0.2
UBE2N-201ENST00000318066 HRCT1Q6UXD1 115 aa13.83□□□□□ -0.2
UBE2N-201ENST00000318066 PTPN13Q12923 2485 aa13.83□□□□□ -0.2
UBE2N-201ENST00000318066 SMIM1B2RUZ4 78 aa13.83□□□□□ -0.2
UBE2N-201ENST00000318066 PIEZO1Q92508 2521 aa13.82□□□□□ -0.2
UBE2N-201ENST00000318066 NUP210LQ5VU65 1888 aa13.82□□□□□ -0.2
UBE2N-201ENST00000318066 GAS8-AS1O95177 125 aa13.81□□□□□ -0.2
UBE2N-201ENST00000318066 MYO18BQ8IUG5 2567 aa13.81□□□□□ -0.2
UBE2N-201ENST00000318066 CYSRT1A8MQ03 144 aa13.81□□□□□ -0.2
UBE2N-201ENST00000318066 Q8N814 137 aa13.81□□□□□ -0.2
UBE2N-201ENST00000318066 HCFC1P51610 2035 aa13.8□□□□□ -0.2
UBE2N-201ENST00000318066 COL4A4P53420 1690 aaPredicted RBP13.8□□□□□ -0.2
UBE2N-201ENST00000318066 C10orf142B7Z368 130 aa13.79□□□□□ -0.2
UBE2N-201ENST00000318066 AMELXQ99217 191 aa13.79□□□□□ -0.2
UBE2N-201ENST00000318066 LOC100131303A0A0U1RQF7 123 aa13.78□□□□□ -0.2
UBE2N-201ENST00000318066 NCOR2Q9Y618 2525 aa13.78□□□□□ -0.2
UBE2N-201ENST00000318066 PCNX3Q9H6A9 2034 aa13.78□□□□□ -0.2
UBE2N-201ENST00000318066 LINC01561Q8N1V8 128 aa13.78□□□□□ -0.2
UBE2N-201ENST00000318066 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.77□□□□□ -0.21
UBE2N-201ENST00000318066 NAV2Q8IVL1 2488 aa13.76□□□□□ -0.21
UBE2N-201ENST00000318066 INAFM1C9JVW0 142 aa13.76□□□□□ -0.21
UBE2N-201ENST00000318066 C10orf25Q5T742 122 aa13.74□□□□□ -0.21
UBE2N-201ENST00000318066 WDR87Q6ZQQ6 2873 aa13.73□□□□□ -0.21
UBE2N-201ENST00000318066 ODF3L2Q3SX64 289 aa13.73□□□□□ -0.21
UBE2N-201ENST00000318066 IGF2RP11717 2491 aa13.72□□□□□ -0.21
UBE2N-201ENST00000318066 PLAC8L1A1L4L8 177 aa13.72□□□□□ -0.21
UBE2N-201ENST00000318066 BEAN1Q3B7T3 259 aa13.72□□□□□ -0.21
UBE2N-201ENST00000318066 C1orf137Q5JT78 98 aa13.72□□□□□ -0.21
UBE2N-201ENST00000318066 LRCOL1A6NCL2 159 aa13.72□□□□□ -0.21
UBE2N-201ENST00000318066 PPDPFQ9H3Y8 114 aa13.72□□□□□ -0.21
UBE2N-201ENST00000318066 PIEZO2Q9H5I5 2752 aa13.71□□□□□ -0.21
UBE2N-201ENST00000318066 SPINK6Q6UWN8 80 aa13.71□□□□□ -0.21
UBE2N-201ENST00000318066 UNQ6190/PRO20217Q6UXQ8 127 aa13.7□□□□□ -0.22
UBE2N-201ENST00000318066 IGLV2-18A0A075B6J9 118 aa13.69□□□□□ -0.22
UBE2N-201ENST00000318066 A0A1B0GUV1 79 aa13.69□□□□□ -0.22
UBE2N-201ENST00000318066 FAM30AQ9NZY2 134 aa13.69□□□□□ -0.22
UBE2N-201ENST00000318066 TRBV10-3A0A0K0K1G6 114 aa13.68□□□□□ -0.22
UBE2N-201ENST00000318066 ATG2AQ2TAZ0 1938 aa13.68□□□□□ -0.22
UBE2N-201ENST00000318066 PRYO14603 147 aa13.68□□□□□ -0.22
UBE2N-201ENST00000318066 IGLV1-51P01701 117 aa13.68□□□□□ -0.22
UBE2N-201ENST00000318066 A0A096LNJ9 63 aa13.68□□□□□ -0.22
UBE2N-201ENST00000318066 RPL37AP8A6NKH3 93 aa13.68□□□□□ -0.22
UBE2N-201ENST00000318066 TSPEAR-AS2P59090 65 aa13.67□□□□□ -0.22
UBE2N-201ENST00000318066 WFDC10AQ9H1F0 79 aa13.67□□□□□ -0.22
UBE2N-201ENST00000318066 LY6G6DO95868 133 aa13.66□□□□□ -0.22
UBE2N-201ENST00000318066 C2orf48Q96LS8 159 aa13.66□□□□□ -0.22
UBE2N-201ENST00000318066 GOLGB1Q14789 3259 aaKnown RBP13.66□□□□□ -0.22
UBE2N-201ENST00000318066 CCDC168Q8NDH2 2452 aa13.66□□□□□ -0.22
UBE2N-201ENST00000318066 PRR4Q16378 134 aa13.65□□□□□ -0.22
UBE2N-201ENST00000318066 A0A0J9YWU9 116 aa13.65□□□□□ -0.22
UBE2N-201ENST00000318066 C18orf65Q6ZTR6 163 aa13.65□□□□□ -0.22
UBE2N-201ENST00000318066 LINC00208Q96KT6 92 aa13.65□□□□□ -0.22
UBE2N-201ENST00000318066 Q8N3U1 123 aa13.64□□□□□ -0.23
UBE2N-201ENST00000318066 MUC22E2RYF6 1773 aaPredicted RBP13.64□□□□□ -0.23
UBE2N-201ENST00000318066 ZNF843Q8N446 348 aa13.64□□□□□ -0.23
UBE2N-201ENST00000318066 REG3GQ6UW15 175 aa13.64□□□□□ -0.23
UBE2N-201ENST00000318066 TANC2Q9HCD6 1990 aa13.64□□□□□ -0.23
UBE2N-201ENST00000318066 CDIP1Q9H305 208 aa13.63□□□□□ -0.23
UBE2N-201ENST00000318066 ADAMTSL4-AS1Q5T5F5 129 aa13.62□□□□□ -0.23
UBE2N-201ENST00000318066 A0A087WYN8 130 aa13.62□□□□□ -0.23
UBE2N-201ENST00000318066 FHL2Q14192 279 aa13.62□□□□□ -0.23
UBE2N-201ENST00000318066 IGHV4-30-4P0DP06 118 aa13.62□□□□□ -0.23
UBE2N-201ENST00000318066 HIVEP3Q5T1R4 2406 aa13.62□□□□□ -0.23
UBE2N-201ENST00000318066 CELA1Q9UNI1 258 aa13.62□□□□□ -0.23
UBE2N-201ENST00000318066 COX6A2Q02221 97 aa13.61□□□□□ -0.23
UBE2N-201ENST00000318066 ARHGAP32A7KAX9 2087 aa13.61□□□□□ -0.23
UBE2N-201ENST00000318066 IGLV9-49A0A0B4J1Y8 123 aa13.6□□□□□ -0.23
UBE2N-201ENST00000318066 TLN1Q9Y490 2541 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms