RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 NEXN-AS1Q8NBZ9 246 aa13.67□□□□□ -0.22
CACNA1A-247ENST00000637769 NCOR2Q9Y618 2525 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 ESM1Q9NQ30 184 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 LINC00308Q8TCZ7 52 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 PATE2Q6UY27 113 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
CACNA1A-247ENST00000637769 A0A1B0GXF2 115 aa13.65□□□□□ -0.22
CACNA1A-247ENST00000637769 CDPF1Q6NVV7 123 aa13.65□□□□□ -0.22
CACNA1A-247ENST00000637769 Q6ZSR3 168 aa13.65□□□□□ -0.22
CACNA1A-247ENST00000637769 UBE2D3P61077 147 aa13.64□□□□□ -0.23
CACNA1A-247ENST00000637769 TMEM223A0PJW6 202 aa13.64□□□□□ -0.23
CACNA1A-247ENST00000637769 MT-ATP8P03928 68 aa13.64□□□□□ -0.23
CACNA1A-247ENST00000637769 MLST8Q9BVC4 326 aa13.64□□□□□ -0.23
CACNA1A-247ENST00000637769 RITA1Q96K30 269 aa13.63□□□□□ -0.23
CACNA1A-247ENST00000637769 IGLV1-47P01700 117 aa13.63□□□□□ -0.23
CACNA1A-247ENST00000637769 SIRPDQ9H106 197 aa13.63□□□□□ -0.23
CACNA1A-247ENST00000637769 COL4A6Q14031 1691 aa13.62□□□□□ -0.23
CACNA1A-247ENST00000637769 LINC00467Q9BRT7 94 aa13.62□□□□□ -0.23
CACNA1A-247ENST00000637769 PRYO14603 147 aa13.62□□□□□ -0.23
CACNA1A-247ENST00000637769 NUPR1O60356 82 aa13.62□□□□□ -0.23
CACNA1A-247ENST00000637769 TRBV6-8A0A0A6YYG3 113 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 PRAC2D3DTV9 90 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 TP73-AS1Q9UF72 201 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 ANKRD11Q6UB99 2663 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 COX7CP15954 63 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 TRIAP1O43715 76 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 PTH2Q96A98 100 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 PYGO1Q9Y3Y4 419 aa13.61□□□□□ -0.23
CACNA1A-247ENST00000637769 DEFB131BA0A096LNP1 70 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 IGF2RP11717 2491 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 TRBV6-4A0A1B0GX49 114 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 LYPD6Q86Y78 171 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 SPTBN4Q9H254 2564 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 LRCOL1A6NCL2 159 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
CACNA1A-247ENST00000637769 C3orf84H3BNL1 204 aa13.59□□□□□ -0.23
CACNA1A-247ENST00000637769 M0R378 163 aa13.59□□□□□ -0.23
CACNA1A-247ENST00000637769 SMIM26A0A096LP01 95 aa13.59□□□□□ -0.23
CACNA1A-247ENST00000637769 FBXL19-AS1Q494R0 122 aa13.59□□□□□ -0.23
CACNA1A-247ENST00000637769 TRBV6-5A0A0K0K1A5 114 aa13.58□□□□□ -0.23
CACNA1A-247ENST00000637769 C10orf25Q5T742 122 aa13.58□□□□□ -0.23
CACNA1A-247ENST00000637769 SYCNQ0VAF6 134 aa13.58□□□□□ -0.24
CACNA1A-247ENST00000637769 LRRC75A-AS1Q8N1F1 130 aa13.58□□□□□ -0.24
CACNA1A-247ENST00000637769 FSTL3O95633 263 aa13.58□□□□□ -0.24
CACNA1A-247ENST00000637769 CD164L2Q6UWJ8 174 aa13.58□□□□□ -0.24
CACNA1A-247ENST00000637769 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-247ENST00000637769 DEFB4AO15263 64 aa13.57□□□□□ -0.24
CACNA1A-247ENST00000637769 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.57□□□□□ -0.24
CACNA1A-247ENST00000637769 DNAJC9-AS1A6NH13 148 aa13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 PMAIP1Q13794 54 aa13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 CDKN2A-AS1Q9UH64 79 aa13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 IGLV4-3A0A075B6K6 122 aa13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 TNFRSF13BO14836 293 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-247ENST00000637769 LINC00574Q9H8X3 128 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 Q6ZVQ6 151 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 TRBV27A0A0K0K1C4 114 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 IGF1P05019 195 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 UNQ9165/PRO28630Q6UXU0 137 aa13.55□□□□□ -0.24
CACNA1A-247ENST00000637769 TTTY13Q9BZ97 58 aa13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 U3KQK5 164 aa13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 LOC107984640A0A0U1RRK4 108 aa13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 FAM19A5Q7Z5A7 132 aaPredicted RBP13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 NRACQ8N912 160 aa13.54□□□□□ -0.24
CACNA1A-247ENST00000637769 LY6LH3BQJ8 138 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 TRAV7A0A075B6U4 112 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 C6orf99Q4VX62 202 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 CFAP126Q5VTH2 177 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 IGLV4-69A0A075B6H9 119 aa13.53□□□□□ -0.24
CACNA1A-247ENST00000637769 Q6ZTI0 123 aa13.52□□□□□ -0.24
CACNA1A-247ENST00000637769 LST1O00453 97 aa13.52□□□□□ -0.24
CACNA1A-247ENST00000637769 Q6Q795 121 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 A6NDX4 124 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 M0QY20 66 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 TRAV10A0A0B4J240 114 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 SNURFQ9Y675 71 aa13.52□□□□□ -0.25
CACNA1A-247ENST00000637769 POLQO75417 2590 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 ZNF524Q96C55 264 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 IGLV2-14P01704 120 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 GRNP28799 593 aaKnown RBP13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 SCXQ7RTU7 201 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 A0A096LNI7 61 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 WFDC10AQ9H1F0 79 aa13.51□□□□□ -0.25
CACNA1A-247ENST00000637769 ZFAND3Q9H8U3 227 aa13.5□□□□□ -0.25
CACNA1A-247ENST00000637769 USP9YO00507 2555 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-247ENST00000637769 K7EQG2 157 aa13.5□□□□□ -0.25
CACNA1A-247ENST00000637769 CEMP1Q6PRD7 247 aaPredicted RBP13.5□□□□□ -0.25
CACNA1A-247ENST00000637769 ZFP36P26651 326 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-247ENST00000637769 PRR4Q16378 134 aa13.49□□□□□ -0.25
CACNA1A-247ENST00000637769 MRGPRG-AS1Q2M3A8 158 aa13.49□□□□□ -0.25
CACNA1A-247ENST00000637769 Q8N7P7 452 aa13.49□□□□□ -0.25
CACNA1A-247ENST00000637769 COL4A4P53420 1690 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-247ENST00000637769 DEFB114Q30KQ6 69 aa13.48□□□□□ -0.25
CACNA1A-247ENST00000637769 Q6JHZ5 121 aa13.48□□□□□ -0.25
CACNA1A-247ENST00000637769 A0A0J9YWU9 116 aa13.47□□□□□ -0.25
CACNA1A-247ENST00000637769 SPINK6Q6UWN8 80 aa13.47□□□□□ -0.25
CACNA1A-247ENST00000637769 ODF3BA8MYP8 253 aa13.47□□□□□ -0.25
CACNA1A-247ENST00000637769 LELP1Q5T871 98 aa13.47□□□□□ -0.25
CACNA1A-247ENST00000637769 ZNF73O43830 326 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms