RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 MIFP14174 115 aa12.34□□□□□ -0.43
CACNA1A-238ENST00000637276 IGLV11-55A0A075B6I3 123 aa12.34□□□□□ -0.43
CACNA1A-238ENST00000637276 IGLV5-52A0A0A0MRZ9 124 aa12.34□□□□□ -0.43
CACNA1A-238ENST00000637276 FAM240AA0A1B0GVK7 77 aa12.34□□□□□ -0.43
CACNA1A-238ENST00000637276 TMEM223A0PJW6 202 aa12.34□□□□□ -0.43
CACNA1A-238ENST00000637276 SBSPONQ8IVN8 264 aa12.34□□□□□ -0.43
CACNA1A-238ENST00000637276 THSD7BQ9C0I4 1608 aa12.34□□□□□ -0.43
CACNA1A-238ENST00000637276 GDF5OSQ5U4N7 250 aa12.33□□□□□ -0.44
CACNA1A-238ENST00000637276 BRI3O95415 125 aa12.33□□□□□ -0.44
CACNA1A-238ENST00000637276 NDUFA11Q86Y39 141 aa12.33□□□□□ -0.44
CACNA1A-238ENST00000637276 NDUFC2-KCTD14E9PQ53 114 aa12.33□□□□□ -0.44
CACNA1A-238ENST00000637276 MYO18BQ8IUG5 2567 aa12.32□□□□□ -0.44
CACNA1A-238ENST00000637276 PLA2G2CQ5R387 149 aa12.32□□□□□ -0.44
CACNA1A-238ENST00000637276 Q9UF83 564 aa12.31□□□□□ -0.44
CACNA1A-238ENST00000637276 LINC01556Q5JQF7 62 aa12.31□□□□□ -0.44
CACNA1A-238ENST00000637276 UFSP1Q6NVU6 142 aa12.31□□□□□ -0.44
CACNA1A-238ENST00000637276 PLXNB3Q9ULL4 1909 aa12.31□□□□□ -0.44
CACNA1A-238ENST00000637276 XGP55808 180 aa12.31□□□□□ -0.44
CACNA1A-238ENST00000637276 WISP2O76076 250 aa12.3□□□□□ -0.44
CACNA1A-238ENST00000637276 C6orf99Q4VX62 202 aa12.3□□□□□ -0.44
CACNA1A-238ENST00000637276 CCDC168Q8NDH2 2452 aa12.29□□□□□ -0.44
CACNA1A-238ENST00000637276 V9GYY9 64 aa12.29□□□□□ -0.44
CACNA1A-238ENST00000637276 NAV3Q8IVL0 2385 aa12.29□□□□□ -0.44
CACNA1A-238ENST00000637276 KPRPQ5T749 579 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-238ENST00000637276 LINC01545Q5VT33 79 aa12.29□□□□□ -0.44
CACNA1A-238ENST00000637276 SPATA12Q7Z6I5 190 aa12.29□□□□□ -0.44
CACNA1A-238ENST00000637276 C20orf173Q96LM9 149 aa12.28□□□□□ -0.44
CACNA1A-238ENST00000637276 MT-ATP8P03928 68 aa12.28□□□□□ -0.44
CACNA1A-238ENST00000637276 TRBV7-6A0A0J9YX20 115 aa12.28□□□□□ -0.44
CACNA1A-238ENST00000637276 Q8N7P7 452 aa12.28□□□□□ -0.44
CACNA1A-238ENST00000637276 TECTAO75443 2155 aa12.28□□□□□ -0.44
CACNA1A-238ENST00000637276 FSHBP01225 129 aa12.27□□□□□ -0.44
CACNA1A-238ENST00000637276 SPANXDQ9BXN6 97 aa12.27□□□□□ -0.44
CACNA1A-238ENST00000637276 DAZAP2Q15038 168 aaPredicted RBP12.27□□□□□ -0.44
CACNA1A-238ENST00000637276 ABCA2Q9BZC7 2435 aa12.27□□□□□ -0.45
CACNA1A-238ENST00000637276 SYCNQ0VAF6 134 aa12.27□□□□□ -0.45
CACNA1A-238ENST00000637276 C1orf137Q5JT78 98 aa12.27□□□□□ -0.45
CACNA1A-238ENST00000637276 ZNF843Q8N446 348 aa12.27□□□□□ -0.45
CACNA1A-238ENST00000637276 AGRNO00468 2067 aa12.27□□□□□ -0.45
CACNA1A-238ENST00000637276 PSPHP1O15172 72 aa12.27□□□□□ -0.45
CACNA1A-238ENST00000637276 E9PLD3 99 aa12.27□□□□□ -0.45
CACNA1A-238ENST00000637276 LINC00337Q8N6G1 96 aa12.27□□□□□ -0.45
CACNA1A-238ENST00000637276 MIAQ16674 131 aa12.26□□□□□ -0.45
CACNA1A-238ENST00000637276 IGLV8-61A0A075B6I0 122 aa12.26□□□□□ -0.45
CACNA1A-238ENST00000637276 NCOR1P1Q9H4R4 102 aa12.26□□□□□ -0.45
CACNA1A-238ENST00000637276 A0A0J9YXY3 114 aa12.26□□□□□ -0.45
CACNA1A-238ENST00000637276 H3BQ85 93 aa12.25□□□□□ -0.45
CACNA1A-238ENST00000637276 C10orf25Q5T742 122 aa12.25□□□□□ -0.45
CACNA1A-238ENST00000637276 CUL9Q8IWT3 2517 aa12.25□□□□□ -0.45
CACNA1A-238ENST00000637276 PCNX3Q9H6A9 2034 aa12.25□□□□□ -0.45
CACNA1A-238ENST00000637276 LENEPQ9Y5L5 61 aa12.24□□□□□ -0.45
CACNA1A-238ENST00000637276 TRBV6-5A0A0K0K1A5 114 aa12.24□□□□□ -0.45
CACNA1A-238ENST00000637276 C9orf116Q5BN46 136 aaPredicted RBP12.24□□□□□ -0.45
CACNA1A-238ENST00000637276 CDKN2A-AS1Q9UH64 79 aa12.24□□□□□ -0.45
CACNA1A-238ENST00000637276 PIP4P1Q86T03 277 aa12.24□□□□□ -0.45
CACNA1A-238ENST00000637276 CACNA1AO00555 2505 aa12.24□□□□□ -0.45
CACNA1A-238ENST00000637276 CRYGAP11844 174 aa12.23□□□□□ -0.45
CACNA1A-238ENST00000637276 ZNF80P51504 273 aaPredicted RBP12.23□□□□□ -0.45
CACNA1A-238ENST00000637276 FAM167A-AS1Q96KT0 104 aa12.23□□□□□ -0.45
CACNA1A-238ENST00000637276 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
CACNA1A-238ENST00000637276 TRAV10A0A0B4J240 114 aa12.22□□□□□ -0.45
CACNA1A-238ENST00000637276 ZNF73O43830 326 aaPredicted RBP12.22□□□□□ -0.45
CACNA1A-238ENST00000637276 M0QXV9 152 aa12.21□□□□□ -0.45
CACNA1A-238ENST00000637276 PRR3P79522 188 aaKnown RBP12.21□□□□□ -0.46
CACNA1A-238ENST00000637276 A0A0J9YX75 114 aa12.21□□□□□ -0.46
CACNA1A-238ENST00000637276 IGLV3-1P01715 115 aa12.21□□□□□ -0.46
CACNA1A-238ENST00000637276 ACACBO00763 2458 aa12.21□□□□□ -0.46
CACNA1A-238ENST00000637276 IGKV2D-30A0A075B6S6 120 aa12.2□□□□□ -0.46
CACNA1A-238ENST00000637276 IGKV2-30P06310 120 aa12.2□□□□□ -0.46
CACNA1A-238ENST00000637276 RAI1Q7Z5J4 1906 aaPredicted RBP12.2□□□□□ -0.46
CACNA1A-238ENST00000637276 ZNF706Q9Y5V0 76 aaPredicted RBP12.19□□□□□ -0.46
CACNA1A-238ENST00000637276 Q6ZQY7 126 aa12.19□□□□□ -0.46
CACNA1A-238ENST00000637276 COA6Q5JTJ3 125 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-238ENST00000637276 KIAA1549LQ6ZVL6 1849 aa12.18□□□□□ -0.46
CACNA1A-238ENST00000637276 LINC00322Q6ZN03 302 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-238ENST00000637276 CTRLP40313 264 aa12.18□□□□□ -0.46
CACNA1A-238ENST00000637276 LINC00208Q96KT6 92 aa12.17□□□□□ -0.46
CACNA1A-238ENST00000637276 PYGO1Q9Y3Y4 419 aa12.17□□□□□ -0.46
CACNA1A-238ENST00000637276 C6orf223Q8N319 242 aa12.17□□□□□ -0.46
CACNA1A-238ENST00000637276 PMAIP1Q13794 54 aa12.16□□□□□ -0.46
CACNA1A-238ENST00000637276 C7orf65Q6ZTY9 151 aa12.16□□□□□ -0.46
CACNA1A-238ENST00000637276 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
CACNA1A-238ENST00000637276 NDUFA7O95182 113 aa12.16□□□□□ -0.46
CACNA1A-238ENST00000637276 NUP210Q8TEM1 1887 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-238ENST00000637276 IL15RAQ13261 267 aa12.15□□□□□ -0.46
CACNA1A-238ENST00000637276 LOC107984640A0A0U1RRK4 108 aa12.15□□□□□ -0.46
CACNA1A-238ENST00000637276 DEFB114Q30KQ6 69 aa12.15□□□□□ -0.46
CACNA1A-238ENST00000637276 CCDC140Q96MF4 163 aa12.15□□□□□ -0.46
CACNA1A-238ENST00000637276 EML5Q05BV3 1969 aa12.15□□□□□ -0.47
CACNA1A-238ENST00000637276 IGLV4-69A0A075B6H9 119 aa12.15□□□□□ -0.47
CACNA1A-238ENST00000637276 CFAP126Q5VTH2 177 aa12.15□□□□□ -0.47
CACNA1A-238ENST00000637276 NUP210LQ5VU65 1888 aa12.14□□□□□ -0.47
CACNA1A-238ENST00000637276 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
CACNA1A-238ENST00000637276 TANC1Q9C0D5 1861 aa12.14□□□□□ -0.47
CACNA1A-238ENST00000637276 H3BT86 120 aa12.14□□□□□ -0.47
CACNA1A-238ENST00000637276 TRIAP1O43715 76 aa12.14□□□□□ -0.47
CACNA1A-238ENST00000637276 EBI3Q14213 229 aa12.14□□□□□ -0.47
CACNA1A-238ENST00000637276 LINC01547P58512 204 aaPredicted RBP12.13□□□□□ -0.47
CACNA1A-238ENST00000637276 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
CACNA1A-238ENST00000637276 C1orf195Q5TG92 126 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms