RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 SMIM11BQ8TCY0 68 aa11.38□□□□□ -0.59
COL5A1-208ENST00000618395 IGLV2-8P01709 118 aa11.38□□□□□ -0.59
COL5A1-208ENST00000618395 PRAC2D3DTV9 90 aa11.38□□□□□ -0.59
COL5A1-208ENST00000618395 CTSGP08311 255 aa11.38□□□□□ -0.59
COL5A1-208ENST00000618395 LINC00208Q96KT6 92 aa11.37□□□□□ -0.59
COL5A1-208ENST00000618395 SPART-AS1P0CW21 52 aa11.37□□□□□ -0.59
COL5A1-208ENST00000618395 PLAC8L1A1L4L8 177 aa11.37□□□□□ -0.59
COL5A1-208ENST00000618395 ESM1Q9NQ30 184 aa11.37□□□□□ -0.59
COL5A1-208ENST00000618395 KLK12Q9UKR0 248 aa11.37□□□□□ -0.59
COL5A1-208ENST00000618395 KAAG1Q9UBP8 84 aa11.37□□□□□ -0.59
COL5A1-208ENST00000618395 LINC00467Q9BRT7 94 aa11.37□□□□□ -0.59
COL5A1-208ENST00000618395 LINC00322Q6ZN03 302 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-208ENST00000618395 RSPO1Q2MKA7 263 aaPredicted RBP11.36□□□□□ -0.59
COL5A1-208ENST00000618395 Q8N3U1 123 aa11.36□□□□□ -0.59
COL5A1-208ENST00000618395 CCL18P55774 89 aa11.36□□□□□ -0.59
COL5A1-208ENST00000618395 BEAN1Q3B7T3 259 aa11.36□□□□□ -0.59
COL5A1-208ENST00000618395 UBE2D3P61077 147 aa11.36□□□□□ -0.59
COL5A1-208ENST00000618395 HIGD2AQ9BW72 106 aa11.36□□□□□ -0.59
COL5A1-208ENST00000618395 IGLV2-23P01705 113 aa11.36□□□□□ -0.59
COL5A1-208ENST00000618395 CRYGAP11844 174 aa11.36□□□□□ -0.59
COL5A1-208ENST00000618395 C11orf1Q9H5F2 150 aa11.35□□□□□ -0.59
COL5A1-208ENST00000618395 A0A087WVE0 104 aa11.35□□□□□ -0.59
COL5A1-208ENST00000618395 TMEM254Q8TBM7 123 aa11.35□□□□□ -0.59
COL5A1-208ENST00000618395 LINC00269Q8N2A0 174 aa11.34□□□□□ -0.59
COL5A1-208ENST00000618395 ZNF524Q96C55 264 aa11.34□□□□□ -0.59
COL5A1-208ENST00000618395 TRBV10-3A0A0K0K1G6 114 aa11.34□□□□□ -0.59
COL5A1-208ENST00000618395 C17orf82Q86X59 251 aaPredicted RBP11.34□□□□□ -0.59
COL5A1-208ENST00000618395 Q6ZQY7 126 aa11.33□□□□□ -0.6
COL5A1-208ENST00000618395 CCL24O00175 119 aa11.33□□□□□ -0.6
COL5A1-208ENST00000618395 IGF1P05019 195 aa11.33□□□□□ -0.6
COL5A1-208ENST00000618395 C8orf87E5RJ46 101 aa11.33□□□□□ -0.6
COL5A1-208ENST00000618395 DHRS4-AS1Q9P1J3 65 aa11.33□□□□□ -0.6
COL5A1-208ENST00000618395 A0A0J9YX75 114 aa11.33□□□□□ -0.6
COL5A1-208ENST00000618395 NTM-AS1Q6ZSK4 140 aa11.32□□□□□ -0.6
COL5A1-208ENST00000618395 RPL28P46779 137 aaKnown RBP11.32□□□□□ -0.6
COL5A1-208ENST00000618395 Q0VFX4 171 aa11.32□□□□□ -0.6
COL5A1-208ENST00000618395 MBD6Q96DN6 1003 aa11.32□□□□□ -0.6
COL5A1-208ENST00000618395 COX17Q14061 63 aa11.31□□□□□ -0.6
COL5A1-208ENST00000618395 TLN2Q9Y4G6 2542 aa11.31□□□□□ -0.6
COL5A1-208ENST00000618395 LRRK2Q5S007 2527 aa11.31□□□□□ -0.6
COL5A1-208ENST00000618395 COL4A5P29400 1685 aa11.31□□□□□ -0.6
COL5A1-208ENST00000618395 PIEZO2Q9H5I5 2752 aa11.3□□□□□ -0.6
COL5A1-208ENST00000618395 RNF223E7ERA6 249 aa11.3□□□□□ -0.6
COL5A1-208ENST00000618395 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.3□□□□□ -0.6
COL5A1-208ENST00000618395 Q6ZS46 218 aa11.3□□□□□ -0.6
COL5A1-208ENST00000618395 CDIP1Q9H305 208 aa11.3□□□□□ -0.6
COL5A1-208ENST00000618395 IGKV1D-37A0A075B6S9 117 aa11.3□□□□□ -0.6
COL5A1-208ENST00000618395 IGLV2-14P01704 120 aa11.29□□□□□ -0.6
COL5A1-208ENST00000618395 IGHV7-81A0A0B4J1V7 117 aa11.29□□□□□ -0.6
COL5A1-208ENST00000618395 hDV103S1A0JD37 113 aa11.29□□□□□ -0.6
COL5A1-208ENST00000618395 DNAJC9-AS1A6NH13 148 aa11.29□□□□□ -0.6
COL5A1-208ENST00000618395 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
COL5A1-208ENST00000618395 DCANP1Q8TF63 244 aa11.29□□□□□ -0.6
COL5A1-208ENST00000618395 F8WDY8 70 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 TMEM105Q8N8V8 129 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 IGLV1-44P01699 117 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 ZNF80P51504 273 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-208ENST00000618395 REG3AQ06141 175 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 Q6ZVQ6 151 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 RITA1Q96K30 269 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 A0A096LNI7 61 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 RNF185Q96GF1 192 aa11.28□□□□□ -0.6
COL5A1-208ENST00000618395 CD164Q04900 197 aa11.27□□□□□ -0.61
COL5A1-208ENST00000618395 PRRC2CQ9Y520 2896 aaKnown RBP11.27□□□□□ -0.61
COL5A1-208ENST00000618395 CRIP2P52943 208 aaPredicted RBP11.26□□□□□ -0.61
COL5A1-208ENST00000618395 UBE2D1P51668 147 aa11.26□□□□□ -0.61
COL5A1-208ENST00000618395 ACANP16112 2415 aa11.26□□□□□ -0.61
COL5A1-208ENST00000618395 K7EMT4 169 aa11.26□□□□□ -0.61
COL5A1-208ENST00000618395 VWCEQ96DN2 955 aa11.26□□□□□ -0.61
COL5A1-208ENST00000618395 DEFB136Q30KP8 78 aa11.26□□□□□ -0.61
COL5A1-208ENST00000618395 C14orf177Q52M58 125 aa11.26□□□□□ -0.61
COL5A1-208ENST00000618395 Q96MF0 132 aa11.26□□□□□ -0.61
COL5A1-208ENST00000618395 FAM19A1Q7Z5A9 133 aa11.26□□□□□ -0.61
COL5A1-208ENST00000618395 EIF4EBP1Q13541 118 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-208ENST00000618395 ZNF503-AS2A6NEH8 195 aa11.25□□□□□ -0.61
COL5A1-208ENST00000618395 SLURP1P55000 103 aa11.25□□□□□ -0.61
COL5A1-208ENST00000618395 ODF3Q96PU9 254 aa11.25□□□□□ -0.61
COL5A1-208ENST00000618395 H0Y9P7 68 aa11.25□□□□□ -0.61
COL5A1-208ENST00000618395 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-208ENST00000618395 LINC01547P58512 204 aaPredicted RBP11.25□□□□□ -0.61
COL5A1-208ENST00000618395 PRO0255Q9UI72 69 aa11.25□□□□□ -0.61
COL5A1-208ENST00000618395 Q8N814 137 aa11.24□□□□□ -0.61
COL5A1-208ENST00000618395 XAGE1AQ9HD64 81 aa11.24□□□□□ -0.61
COL5A1-208ENST00000618395 M0QY20 66 aa11.23□□□□□ -0.61
COL5A1-208ENST00000618395 A0A087WZ39 114 aa11.23□□□□□ -0.61
COL5A1-208ENST00000618395 C11orf53Q8IXP5 236 aa11.23□□□□□ -0.61
COL5A1-208ENST00000618395 SPINT4Q6UDR6 99 aa11.22□□□□□ -0.61
COL5A1-208ENST00000618395 MYCNOSP40205 109 aa11.22□□□□□ -0.61
COL5A1-208ENST00000618395 GPHB5Q86YW7 130 aa11.22□□□□□ -0.61
COL5A1-208ENST00000618395 FN1P02751 2386 aaKnown RBP11.22□□□□□ -0.61
COL5A1-208ENST00000618395 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
COL5A1-208ENST00000618395 PRSS33Q8NF86 280 aa11.22□□□□□ -0.61
COL5A1-208ENST00000618395 MDFIQ99750 246 aa11.21□□□□□ -0.61
COL5A1-208ENST00000618395 SETD2Q9BYW2 2564 aaPredicted RBP11.21□□□□□ -0.61
COL5A1-208ENST00000618395 HILS1P60008 231 aa11.21□□□□□ -0.61
COL5A1-208ENST00000618395 E7EUB6 86 aa11.21□□□□□ -0.62
COL5A1-208ENST00000618395 FLG2Q5D862 2391 aaPredicted RBP11.21□□□□□ -0.62
COL5A1-208ENST00000618395 C9orf66Q5T8R8 295 aa11.2□□□□□ -0.62
COL5A1-208ENST00000618395 C5orf56Q8N8D9 126 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms