RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	IGHV3-33	P01772	117 aa		10.28	□□□□□ -0.76
MUC1-223	ENST00000611571	ATP6V0E2	Q8NHE4	81 aa		10.28	□□□□□ -0.76
MUC1-223	ENST00000611571	POLR2K	P53803	58 aa	Known RBP	10.27	□□□□□ -0.76
MUC1-223	ENST00000611571		Q6ZSV7	163 aa		10.27	□□□□□ -0.76
MUC1-223	ENST00000611571	UFSP1	Q6NVU6	142 aa		10.27	□□□□□ -0.77
MUC1-223	ENST00000611571	COX7B2	Q8TF08	81 aa		10.27	□□□□□ -0.77
MUC1-223	ENST00000611571	OVOL2	Q9BRP0	275 aa		10.27	□□□□□ -0.77
MUC1-223	ENST00000611571	TMEM223	A0PJW6	202 aa		10.27	□□□□□ -0.77
MUC1-223	ENST00000611571	CRYGD	P07320	174 aa		10.27	□□□□□ -0.77
MUC1-223	ENST00000611571	CNFN	Q9BYD5	112 aa		10.27	□□□□□ -0.77
MUC1-223	ENST00000611571	UBL5	Q9BZL1	73 aa		10.27	□□□□□ -0.77
MUC1-223	ENST00000611571	TRBV27	A0A0K0K1C4	114 aa		10.26	□□□□□ -0.77
MUC1-223	ENST00000611571	MIA	Q16674	131 aa		10.26	□□□□□ -0.77
MUC1-223	ENST00000611571	WFDC10A	Q9H1F0	79 aa		10.26	□□□□□ -0.77
MUC1-223	ENST00000611571	ADGRG4	Q8IZF6	3080 aa		10.26	□□□□□ -0.77
MUC1-223	ENST00000611571	DEFB135	Q30KP9	77 aa		10.26	□□□□□ -0.77
MUC1-223	ENST00000611571	NDUFA7	O95182	113 aa		10.25	□□□□□ -0.77
MUC1-223	ENST00000611571	IGHV3-30	P01768	117 aa		10.25	□□□□□ -0.77
MUC1-223	ENST00000611571	IGHV3-30-5	P0DP03	117 aa		10.25	□□□□□ -0.77
MUC1-223	ENST00000611571	DAZ2	Q13117	558 aa	Known RBP	10.25	□□□□□ -0.77
MUC1-223	ENST00000611571	DAZ4	Q86SG3	579 aa	Known RBP	10.25	□□□□□ -0.77
MUC1-223	ENST00000611571	DAZ3	Q9NR90	486 aa	Known RBP	10.25	□□□□□ -0.77
MUC1-223	ENST00000611571	XG	P55808	180 aa		10.25	□□□□□ -0.77
MUC1-223	ENST00000611571	TSHB	P01222	138 aa		10.24	□□□□□ -0.77
MUC1-223	ENST00000611571	C14orf132	Q9NPU4	83 aa		10.24	□□□□□ -0.77
MUC1-223	ENST00000611571	MGAM2	Q2M2H8	2515 aa		10.24	□□□□□ -0.77
MUC1-223	ENST00000611571	KALRN	O60229	2985 aa		10.24	□□□□□ -0.77
MUC1-223	ENST00000611571	SLPI	P03973	132 aa		10.24	□□□□□ -0.77
MUC1-223	ENST00000611571	CRIP2	P52943	208 aa	Predicted RBP	10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	CFAP126	Q5VTH2	177 aa		10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	DEFB105A	Q8NG35	78 aa		10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	ZNF292	O60281	2723 aa		10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	TSPEAR-AS2	P59090	65 aa		10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	HERV-K104	P63124	156 aa		10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	DCANP1	Q8TF63	244 aa		10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	CHD6	Q8TD26	2715 aa		10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	KLLN	B2CW77	178 aa		10.23	□□□□□ -0.77
MUC1-223	ENST00000611571	MRPL23	Q16540	153 aa	Known RBP	10.22	□□□□□ -0.77
MUC1-223	ENST00000611571	TMEM126A	Q9H061	195 aa		10.22	□□□□□ -0.77
MUC1-223	ENST00000611571	ORMDL1	Q9P0S3	153 aa		10.22	□□□□□ -0.77
MUC1-223	ENST00000611571	DEFB114	Q30KQ6	69 aa		10.22	□□□□□ -0.77
MUC1-223	ENST00000611571	MAST4	O15021	2626 aa		10.21	□□□□□ -0.77
MUC1-223	ENST00000611571		A0A1B0GX51	115 aa		10.21	□□□□□ -0.77
MUC1-223	ENST00000611571	IGIP	A6NJ69	53 aa		10.21	□□□□□ -0.77
MUC1-223	ENST00000611571	NCR3	O14931	201 aa		10.21	□□□□□ -0.77
MUC1-223	ENST00000611571	PSMB8	P28062	276 aa		10.21	□□□□□ -0.77
MUC1-223	ENST00000611571		H3BT86	120 aa		10.21	□□□□□ -0.78
MUC1-223	ENST00000611571	POM121L12	Q8N7R1	296 aa		10.21	□□□□□ -0.78
MUC1-223	ENST00000611571	GHRH	P01286	108 aa		10.21	□□□□□ -0.78
MUC1-223	ENST00000611571	ZMAT4	Q9H898	229 aa		10.21	□□□□□ -0.78
MUC1-223	ENST00000611571	LOC100131303	A0A0U1RQF7	123 aa		10.2	□□□□□ -0.78
MUC1-223	ENST00000611571		A0A0B4J2C4	111 aa		10.2	□□□□□ -0.78
MUC1-223	ENST00000611571	C16orf74	Q96GX8	76 aa		10.2	□□□□□ -0.78
MUC1-223	ENST00000611571	KLK12	Q9UKR0	248 aa		10.2	□□□□□ -0.78
MUC1-223	ENST00000611571	LINC00308	Q8TCZ7	52 aa		10.2	□□□□□ -0.78
MUC1-223	ENST00000611571	PCSK5	Q92824	1860 aa		10.2	□□□□□ -0.78
MUC1-223	ENST00000611571	DSCR8	Q96T75	97 aa		10.19	□□□□□ -0.78
MUC1-223	ENST00000611571	COX7A2L	O14548	114 aa		10.19	□□□□□ -0.78
MUC1-223	ENST00000611571	NDUFV3	P56181	108 aa	Known RBP	10.19	□□□□□ -0.78
MUC1-223	ENST00000611571	LINC00526	Q96FQ7	95 aa		10.19	□□□□□ -0.78
MUC1-223	ENST00000611571	DMXL2	Q8TDJ6	3036 aa		10.18	□□□□□ -0.78
MUC1-223	ENST00000611571	IGLV2-18	A0A075B6J9	118 aa		10.18	□□□□□ -0.78
MUC1-223	ENST00000611571	IGKV2D-24	A0A075B6R9	120 aa		10.18	□□□□□ -0.78
MUC1-223	ENST00000611571	DNAJC9-AS1	A6NH13	148 aa		10.18	□□□□□ -0.78
MUC1-223	ENST00000611571	TMEM263	Q8WUH6	116 aa	Known RBP	10.18	□□□□□ -0.78
MUC1-223	ENST00000611571	IGHV4-28	A0A0C4DH34	117 aa		10.18	□□□□□ -0.78
MUC1-223	ENST00000611571	RNF152	Q8N8N0	203 aa		10.18	□□□□□ -0.78
MUC1-223	ENST00000611571	TRAC	P01848	142 aa		10.17	□□□□□ -0.78
MUC1-223	ENST00000611571	SDIM1	Q6ZPB5	146 aa		10.17	□□□□□ -0.78
MUC1-223	ENST00000611571	MRAP	Q8TCY5	172 aa		10.16	□□□□□ -0.78
MUC1-223	ENST00000611571	C4orf3	Q8WVX3	66 aa		10.16	□□□□□ -0.78
MUC1-223	ENST00000611571	IGLV4-69	A0A075B6H9	119 aa		10.16	□□□□□ -0.78
MUC1-223	ENST00000611571	TRBV6-5	A0A0K0K1A5	114 aa		10.16	□□□□□ -0.78
MUC1-223	ENST00000611571	NKAPP1	Q8N9T2	125 aa		10.16	□□□□□ -0.78
MUC1-223	ENST00000611571	CLUHP3	Q96NS8	147 aa		10.16	□□□□□ -0.78
MUC1-223	ENST00000611571		H0YGX0	51 aa		10.16	□□□□□ -0.78
MUC1-223	ENST00000611571	PRB2	P02812	416 aa	Predicted RBP	10.16	□□□□□ -0.78
MUC1-223	ENST00000611571		Q6YL49	198 aa		10.16	□□□□□ -0.78
MUC1-223	ENST00000611571	IGLV1-40	P01703	118 aa		10.15	□□□□□ -0.78
MUC1-223	ENST00000611571	LINC00269	Q8N2A0	174 aa		10.15	□□□□□ -0.78
MUC1-223	ENST00000611571	LINC00482	Q8N8I6	264 aa		10.15	□□□□□ -0.78
MUC1-223	ENST00000611571	CITED1	Q99966	193 aa		10.15	□□□□□ -0.78
MUC1-223	ENST00000611571	IGHV4-31	P0DP07	118 aa		10.15	□□□□□ -0.78
MUC1-223	ENST00000611571	C9orf85	Q96MD7	179 aa		10.15	□□□□□ -0.78
MUC1-223	ENST00000611571	CFAP46	Q8IYW2	2715 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	PSCA	O43653	123 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	APOC4	P55056	127 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	PSMG3-AS1	Q96PY0	264 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	TRBV10-1	A0A0K0K1A3	114 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	ACYP1	P07311	99 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	TACC2	O95359	2948 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	ZZEF1	O43149	2961 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	TMEM89	A2RUT3	159 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	CAMK2N2	Q96S95	79 aa		10.14	□□□□□ -0.79
MUC1-223	ENST00000611571	UBE2D1	P51668	147 aa		10.13	□□□□□ -0.79
MUC1-223	ENST00000611571	RPL32	P62910	135 aa	Known RBP	10.13	□□□□□ -0.79
MUC1-223	ENST00000611571	RPL18A	Q02543	176 aa	Known RBP	10.13	□□□□□ -0.79
MUC1-223	ENST00000611571	ADAMTSL4-AS1	Q5T5F5	129 aa		10.13	□□□□□ -0.79
MUC1-223	ENST00000611571	KRTAP10-9	P60411	292 aa		10.13	□□□□□ -0.79
MUC1-223	ENST00000611571	ODF3	Q96PU9	254 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 101 ms