RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 HIST1H2BOP23527 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST1H2BBP33778 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST1H2BDP58876 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST1H2BCP62807 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST2H2BEQ16778 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 MRPL51Q4U2R6 128 aaKnown RBP6.35□□□□□ -1.39
BRCA1-226ENST00000591534 ORMDL2Q53FV1 153 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 LINC01556Q5JQF7 62 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-226ENST00000591534 AMN1Q8IY45 258 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 C14orf178Q8N769 122 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST1H2BHQ93079 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 TMEM18Q96B42 140 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST1H2BNQ99877 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 HIST1H2BMQ99879 126 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 TM2D2Q9BX73 214 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 ST20Q9HBF5 79 aa6.35□□□□□ -1.39
BRCA1-226ENST00000591534 TRBV6-5A0A0K0K1A5 114 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 D6R8Y8 96 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 VCYO14598 125 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 RS1O15537 224 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 HSBP1O75506 76 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 LINC00614P0C842 121 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 FAM74A4Q5TZK3 123 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 NIT2Q9NQR4 276 aa6.34□□□□□ -1.39
BRCA1-226ENST00000591534 IBA57-AS1B1ANH7 110 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 ESDP10768 282 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 NDUFA6P56556 154 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 SSTP61278 116 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 PKIAP61925 76 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 RPL36AP83881 106 aaKnown RBP6.33□□□□□ -1.4
BRCA1-226ENST00000591534 RHOHQ15669 191 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 CFAP126Q5VTH2 177 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 DAZ4Q86SG3 579 aaKnown RBP6.33□□□□□ -1.4
BRCA1-226ENST00000591534 Q8N814 137 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 RPL36ALQ969Q0 106 aaKnown RBP6.33□□□□□ -1.4
BRCA1-226ENST00000591534 SAMD10Q9BYL1 202 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 DAZ3Q9NR90 486 aaKnown RBP6.33□□□□□ -1.4
BRCA1-226ENST00000591534 HSPB8Q9UJY1 196 aa6.33□□□□□ -1.4
BRCA1-226ENST00000591534 NCR2O95944 276 aa6.32□□□□□ -1.4
BRCA1-226ENST00000591534 GATA1P15976 413 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-226ENST00000591534 LAGE3Q14657 143 aa6.32□□□□□ -1.4
BRCA1-226ENST00000591534 PAPPA-AS1Q5QFB9 102 aa6.32□□□□□ -1.4
BRCA1-226ENST00000591534 C18orf32Q8TCD1 76 aa6.32□□□□□ -1.4
BRCA1-226ENST00000591534 Q9HAA7 133 aa6.32□□□□□ -1.4
BRCA1-226ENST00000591534 SRRM2Q9UQ35 2752 aaKnown RBP6.32□□□□□ -1.4
BRCA1-226ENST00000591534 MUC21A0A0G2JKD1 596 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 MUC21A0A140T8X8 626 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 LRCOL1A6NCL2 159 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 FCER1GP30273 86 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 LELP1Q5T871 98 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 Q8N8P6 123 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 RNF185Q96GF1 192 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 COX11Q9Y6N1 276 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 KIF25-AS1Q9Y6Z4 181 aa6.31□□□□□ -1.4
BRCA1-226ENST00000591534 TRBV7-3A0A075B6L6 115 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 TRAV8-3A0A0A6YYJ7 113 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 TRBV27A0A0K0K1C4 114 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 C5orf52A6NGY3 159 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 I3L3M4 83 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 M0QY20 66 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 KIAA1644Q3SXP7 199 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 RNASEKQ6P5S7 137 aaKnown RBP6.3□□□□□ -1.4
BRCA1-226ENST00000591534 SLC25A29Q8N8R3 303 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 GTSF1LQ9H1H1 148 aa6.3□□□□□ -1.4
BRCA1-226ENST00000591534 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 LOC100131303A0A0U1RQF7 123 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 C20orf202A1L168 122 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 LINC01546A6NGU7 62 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 ATP5LO75964 103 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 IGHV3-30P01768 117 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 IGHV3-33P01772 117 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 IGHV3-30-3P0DP02 117 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 IGHV3-30-5P0DP03 117 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 SUMO4Q6EEV6 95 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 NIT1Q86X76 327 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 ATP6V0E2Q8NHE4 81 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 DEFB104AQ8WTQ1 72 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 RMI2Q96E14 147 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 FAT1Q14517 4588 aa6.29□□□□□ -1.4
BRCA1-226ENST00000591534 SDHAF1A6NFY7 115 aa6.28□□□□□ -1.4
BRCA1-226ENST00000591534 H7C423 109 aa6.28□□□□□ -1.4
BRCA1-226ENST00000591534 HBDP02042 147 aa6.28□□□□□ -1.4
BRCA1-226ENST00000591534 AMTP48728 403 aa6.28□□□□□ -1.4
BRCA1-226ENST00000591534 SNRPEP62304 92 aaKnown RBP6.28□□□□□ -1.4
BRCA1-226ENST00000591534 COTL1Q14019 142 aa6.28□□□□□ -1.4
BRCA1-226ENST00000591534 UFSP1Q6NVU6 142 aa6.28□□□□□ -1.4
BRCA1-226ENST00000591534 NRACQ8N912 160 aa6.28□□□□□ -1.4
BRCA1-226ENST00000591534 MYCBP2O75592 4640 aa6.28□□□□□ -1.4
BRCA1-226ENST00000591534 SERF1AO75920 110 aa6.27□□□□□ -1.41
BRCA1-226ENST00000591534 LEPROTL1O95214 131 aa6.27□□□□□ -1.41
BRCA1-226ENST00000591534 NPYP01303 97 aa6.27□□□□□ -1.41
BRCA1-226ENST00000591534 HAMPP81172 84 aa6.27□□□□□ -1.41
BRCA1-226ENST00000591534 MAP1LC3CQ9BXW4 147 aa6.27□□□□□ -1.41
BRCA1-226ENST00000591534 CYSLTR1Q9Y271 337 aa6.27□□□□□ -1.41
BRCA1-226ENST00000591534 IGHV3-73A0A0B4J1V6 119 aa6.26□□□□□ -1.41
BRCA1-226ENST00000591534 LOC389332A0A1B0GUA5 103 aa6.26□□□□□ -1.41
BRCA1-226ENST00000591534 KRTAP29-1A8MX34 341 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms