RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 MUC21A0A0G2JKD1 596 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 A0A1B0GW15 77 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 IGSF23A1L1A6 192 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 TMEM262E9PQX1 116 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 K7EQM0 130 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 PDE6DO43924 150 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 MGST1P10620 155 aaKnown RBP3.23□□□□□ -1.89
HERC1-213ENST00000561359 HSD52Q0P140 79 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 PMCHL1Q16048 86 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 AMMECR1LQ6DCA0 310 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 ENHOQ6UWT2 76 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 LHFPL1Q86WI0 220 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 OR5A1Q8NGJ0 315 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 FAM213BQ8TBF2 198 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 MRPL53Q96EL3 112 aaKnown RBP3.23□□□□□ -1.89
HERC1-213ENST00000561359 LINC00479Q96M42 142 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 RTBDNQ9BSG5 229 aaPredicted RBP3.23□□□□□ -1.89
HERC1-213ENST00000561359 CHCHD7Q9BUK0 85 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 NAA60Q9H7X0 242 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 GEMIN7Q9H840 131 aaKnown RBP3.23□□□□□ -1.89
HERC1-213ENST00000561359 GPR132Q9UNW8 380 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 PSG8Q9UQ74 426 aa3.23□□□□□ -1.89
HERC1-213ENST00000561359 IGKV2-40A0A087WW87 121 aaPredicted RBP3.22□□□□□ -1.89
HERC1-213ENST00000561359 PRSS46E5RG02 174 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 C17orf112F2Z3M2 114 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 J3QR89 54 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 COX7A2P2O60397 106 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 IGKV2D-40P01614 121 aaPredicted RBP3.22□□□□□ -1.89
HERC1-213ENST00000561359 HIST1H1EP10412 219 aaKnown RBP3.22□□□□□ -1.89
HERC1-213ENST00000561359 ATP6V0CP27449 155 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 CCL20P78556 96 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 COX6A2Q02221 97 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 GAGE6Q13070 117 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 C5orf47Q569G3 176 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 SPANXN5Q5MJ07 72 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 CFAP126Q5VTH2 177 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 MARCH1Q8TCQ1 289 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 ATP5SQ99766 215 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 PARLQ9H300 379 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 MANBALQ9NQG1 85 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 SLC39A9Q9NUM3 307 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 ZNF492Q9P255 531 aa3.22□□□□□ -1.89
HERC1-213ENST00000561359 DUXBA0A1W2PPF3 345 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 A4D1N5 150 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 A6NDN8 102 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 GAGE10A6NGK3 116 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 GNRH2O43555 120 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 ANGP03950 147 aaKnown RBP3.21□□□□□ -1.9
HERC1-213ENST00000561359 BCL2P10415 239 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 GNG4P50150 75 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 ZNF138P52744 262 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 SEC11AP67812 179 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 SMAGPQ0VAQ4 97 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 ZNF266Q14584 549 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 IAH1Q2TAA2 248 aaPredicted RBP3.21□□□□□ -1.9
HERC1-213ENST00000561359 ZNF876PQ49A33 203 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 BVES-AS1Q5T3Y7 98 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 CST9LP1Q5W188 147 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 Q6ZVH6 145 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 LYZL2Q7Z4W2 148 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 BOD1L2Q8IYS8 172 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 MBD3L1Q8WWY6 194 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 DERL1Q9BUN8 251 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 ST20Q9HBF5 79 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 ERG28Q9UKR5 140 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 TIMM9Q9Y5J7 89 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 TRAPPC1Q9Y5R8 145 aa3.21□□□□□ -1.9
HERC1-213ENST00000561359 TRBV19A0A075B6N1 114 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 TMEM250H0YL14 139 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 H3BP45 60 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 H3BRM9 83 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 K7EP34 96 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 NUPR1O60356 82 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 IFNA1P01562 189 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 LINC00694P0DN24 101 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 RPL23P62829 140 aaKnown RBP3.2□□□□□ -1.9
HERC1-213ENST00000561359 RPL32P62910 135 aaKnown RBP3.2□□□□□ -1.9
HERC1-213ENST00000561359 SLC38A11Q08AI6 406 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 ADIRFQ15847 76 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 MIAQ16674 131 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 C10orf113Q5VZT2 155 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 FA2HQ7L5A8 372 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 EXOC3-AS1Q8N2X6 119 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 OR2G3Q8NGZ4 309 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 PMCHL2Q9BQD1 86 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 TPPP3Q9BW30 176 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 VCX2Q9H322 139 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 NPVFQ9HCQ7 196 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 Q9UF83 564 aa3.2□□□□□ -1.9
HERC1-213ENST00000561359 IGLV1-50A0A075B6I6 118 aa3.19□□□□□ -1.9
HERC1-213ENST00000561359 SERF1AO75920 110 aa3.19□□□□□ -1.9
HERC1-213ENST00000561359 Q6AWC8 147 aa3.19□□□□□ -1.9
HERC1-213ENST00000561359 CLPSL2Q6UWE3 100 aa3.19□□□□□ -1.9
HERC1-213ENST00000561359 SMIM7Q9BQ49 75 aa3.19□□□□□ -1.9
HERC1-213ENST00000561359 SMIM3Q9BZL3 60 aa3.19□□□□□ -1.9
HERC1-213ENST00000561359 C11orf1Q9H5F2 150 aa3.19□□□□□ -1.9
HERC1-213ENST00000561359 MUC17Q685J3 4493 aa3.18□□□□□ -1.9
HERC1-213ENST00000561359 TRAV34A0A0B4J273 112 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms