RNA–Protein interactions for RNA: ENST00000561225.1

MARK3-225, Transcript of microtubule affinity regulating kinase 3, human

TSL 5

Gene MARK3, Length 523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-225	ENST00000561225	UBE2G1	P62253	170 aa		4.59	□□□□□ -1.67
MARK3-225	ENST00000561225	COTL1	Q14019	142 aa		4.59	□□□□□ -1.67
MARK3-225	ENST00000561225	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	MB	P02144	154 aa		4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	ATP6V0C	P27449	155 aa		4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	MEF2B	Q02080	365 aa	Predicted RBP	4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	RASL11A	Q6T310	242 aa		4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	PSMG3	Q9BT73	122 aa	Predicted RBP	4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	NKX6-2	Q9C056	277 aa	Predicted RBP	4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.58	□□□□□ -1.68
MARK3-225	ENST00000561225	IGLV4-69	A0A075B6H9	119 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	FXYD6-FXYD2	A0A087WZ82	144 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	CCL25	O15444	150 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	APOM	O95445	188 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	LINC01547	P58512	204 aa	Predicted RBP	4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	SERF2	P84101	59 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	RPL18A	Q02543	176 aa	Known RBP	4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	ZNF726P1	Q15940	193 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	AMMECR1L	Q6DCA0	310 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	RNASEK	Q6P5S7	137 aa	Known RBP	4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	NUP35	Q8NFH5	326 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	ISOC2	Q96AB3	205 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	RPP21	Q9H633	154 aa	Known RBP	4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	NIT2	Q9NQR4	276 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	TNFSF18	Q9UNG2	199 aa		4.57	□□□□□ -1.68
MARK3-225	ENST00000561225	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.56	□□□□□ -1.68
MARK3-225	ENST00000561225	LINC00959	A0A1B0GUT2	108 aa		4.56	□□□□□ -1.68
MARK3-225	ENST00000561225	KANTR	A0A1W2PQU2	76 aa		4.56	□□□□□ -1.68
MARK3-225	ENST00000561225	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.56	□□□□□ -1.68
MARK3-225	ENST00000561225		G3V3Q6	166 aa		4.56	□□□□□ -1.68
MARK3-225	ENST00000561225	TPRXL	Q17RH7	258 aa		4.56	□□□□□ -1.68
MARK3-225	ENST00000561225	C9orf62	Q8N4C0	152 aa		4.56	□□□□□ -1.68
MARK3-225	ENST00000561225	OR5A1	Q8NGJ0	315 aa		4.56	□□□□□ -1.68
MARK3-225	ENST00000561225	FAM168B	A1KXE4	195 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	ARPC5	O15511	151 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	NTF3	P20783	257 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	EIF5AL1	Q6IS14	154 aa	Known RBP	4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	CD164L2	Q6UWJ8	174 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	SLC51B	Q86UW2	128 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	KCNRG	Q8N5I3	272 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	TSKU	Q8WUA8	353 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	CAMK2N2	Q96S95	79 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	RETNLB	Q9BQ08	111 aa		4.55	□□□□□ -1.68
MARK3-225	ENST00000561225	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.54	□□□□□ -1.68
MARK3-225	ENST00000561225	CTXND1	A0A1B0GTU2	59 aa		4.54	□□□□□ -1.68
MARK3-225	ENST00000561225	SMLR1	H3BR10	107 aa		4.54	□□□□□ -1.68
MARK3-225	ENST00000561225		H7C423	109 aa		4.54	□□□□□ -1.68
MARK3-225	ENST00000561225	BCL2L11	O43521	198 aa		4.54	□□□□□ -1.68
MARK3-225	ENST00000561225	AKR1C3	P42330	323 aa		4.54	□□□□□ -1.68
MARK3-225	ENST00000561225	OPRPN	Q99935	248 aa	Predicted RBP	4.54	□□□□□ -1.68
MARK3-225	ENST00000561225	TCEAL7	Q9BRU2	100 aa		4.54	□□□□□ -1.68
MARK3-225	ENST00000561225		A0A087X002	238 aa		4.53	□□□□□ -1.68
MARK3-225	ENST00000561225	IGLC6	P0CF74	106 aa		4.53	□□□□□ -1.68
MARK3-225	ENST00000561225	ZNF25	P17030	456 aa	Predicted RBP	4.53	□□□□□ -1.68
MARK3-225	ENST00000561225		Q5BKY6	102 aa		4.53	□□□□□ -1.68
MARK3-225	ENST00000561225	TMUB2	Q71RG4	321 aa		4.53	□□□□□ -1.68
MARK3-225	ENST00000561225	STOML3	Q8TAV4	291 aa		4.53	□□□□□ -1.68
MARK3-225	ENST00000561225	C2orf48	Q96LS8	159 aa		4.53	□□□□□ -1.68
MARK3-225	ENST00000561225	TPPP3	Q9BW30	176 aa		4.53	□□□□□ -1.68
MARK3-225	ENST00000561225	NCR2	O95944	276 aa		4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	APCS	P02743	223 aa		4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	ESD	P10768	282 aa		4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	FHIT	P49789	147 aa		4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	SS18	Q15532	418 aa		4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	CST9LP1	Q5W188	147 aa		4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	BAGE2	Q86Y30	109 aa		4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	KRTAP7-1	Q8IUC3	87 aa		4.52	□□□□□ -1.69
MARK3-225	ENST00000561225	IGLV7-46	A0A075B6I9	117 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	C19orf71	A6NCJ1	209 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	COX7A2L	O14548	114 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	ZNF861P	O60384	105 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	CRYGA	P11844	174 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	UBE2B	P63146	152 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	GATD1	Q8NB37	220 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	OR2D3	Q8NGH3	330 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	TYMSOS	Q8TAI1	123 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	TMEM101	Q96IK0	257 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	BTF3L4	Q96K17	158 aa		4.51	□□□□□ -1.69
MARK3-225	ENST00000561225	MAP1LC3B2	A6NCE7	125 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	UMAD1	C9J7I0	102 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225		M0QXV9	152 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	S100A9	P06702	114 aa	Known RBP	4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	TRGC1	P0CF51	173 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	KRTAP10-6	P60371	365 aa	Predicted RBP	4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	RAB14	P61106	215 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	TEX261	Q6UWH6	196 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	RPL39L	Q96EH5	51 aa	Known RBP	4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	KRTAP4-1	Q9BYQ7	146 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	MAP1LC3B	Q9GZQ8	125 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	CDC42SE2	Q9NRR3	84 aa		4.5	□□□□□ -1.69
MARK3-225	ENST00000561225	TWIST1	Q15672	202 aa		4.49	□□□□□ -1.69
MARK3-225	ENST00000561225	NDUFA5	Q16718	116 aa		4.49	□□□□□ -1.69
MARK3-225	ENST00000561225	C10orf25	Q5T742	122 aa		4.49	□□□□□ -1.69
MARK3-225	ENST00000561225	NRAC	Q8N912	160 aa		4.49	□□□□□ -1.69
MARK3-225	ENST00000561225	MRPL35	Q9NZE8	188 aa	Known RBP	4.49	□□□□□ -1.69
MARK3-225	ENST00000561225	SDHAF1	A6NFY7	115 aa		4.48	□□□□□ -1.69
MARK3-225	ENST00000561225	C1orf196	B1AJZ1	125 aa		4.48	□□□□□ -1.69
MARK3-225	ENST00000561225		F2Z2F3	143 aa		4.48	□□□□□ -1.69

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