RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ZNF575Q86XF7 245 aa10.9□□□□□ -0.66
NEK9-209ENST00000556170 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
NEK9-209ENST00000556170 IGLV4-3A0A075B6K6 122 aa10.9□□□□□ -0.67
NEK9-209ENST00000556170 UBE2WQ96B02 151 aa10.9□□□□□ -0.67
NEK9-209ENST00000556170 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.89□□□□□ -0.67
NEK9-209ENST00000556170 TSHBP01222 138 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 ATXN8Q156A1 80 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 CELSR2Q9HCU4 2923 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 IGIPA6NJ69 53 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 CLPSL2Q6UWE3 100 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 SMR3AQ99954 134 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 Q9UF83 564 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 LEPROTO15243 131 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 IGHV3-30-3P0DP02 117 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 LINC00158P58513 81 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 LINC00467Q9BRT7 94 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 NF1P21359 2839 aa10.89□□□□□ -0.67
NEK9-209ENST00000556170 A0A0J9YY99 117 aa10.88□□□□□ -0.67
NEK9-209ENST00000556170 DEFB4AO15263 64 aa10.88□□□□□ -0.67
NEK9-209ENST00000556170 ZNF580Q9UK33 172 aa10.88□□□□□ -0.67
NEK9-209ENST00000556170 ZNF22P17026 224 aaPredicted RBP10.88□□□□□ -0.67
NEK9-209ENST00000556170 CFAP126Q5VTH2 177 aa10.88□□□□□ -0.67
NEK9-209ENST00000556170 KIF25-AS1Q9Y6Z4 181 aa10.88□□□□□ -0.67
NEK9-209ENST00000556170 Q9H8V8 135 aa10.87□□□□□ -0.67
NEK9-209ENST00000556170 LINC00315P59091 139 aa10.87□□□□□ -0.67
NEK9-209ENST00000556170 GAGE2AQ6NT46 116 aa10.87□□□□□ -0.67
NEK9-209ENST00000556170 RBMY1A1P0DJD3 496 aaKnown RBP10.87□□□□□ -0.67
NEK9-209ENST00000556170 RBMY1CP0DJD4 496 aa10.87□□□□□ -0.67
NEK9-209ENST00000556170 RBMY1FQ15415 496 aaKnown RBP10.87□□□□□ -0.67
NEK9-209ENST00000556170 TRBV7-3A0A075B6L6 115 aa10.86□□□□□ -0.67
NEK9-209ENST00000556170 BRI3O95415 125 aa10.86□□□□□ -0.67
NEK9-209ENST00000556170 TMEM243Q9BU79 118 aa10.86□□□□□ -0.67
NEK9-209ENST00000556170 M0QXV9 152 aa10.86□□□□□ -0.67
NEK9-209ENST00000556170 PFN2P35080 140 aa10.86□□□□□ -0.67
NEK9-209ENST00000556170 LINC01006Q8NI28 216 aa10.86□□□□□ -0.67
NEK9-209ENST00000556170 TRBV6-5A0A0K0K1A5 114 aa10.85□□□□□ -0.67
NEK9-209ENST00000556170 CFC1BP0CG36 223 aa10.85□□□□□ -0.67
NEK9-209ENST00000556170 CFC1P0CG37 223 aa10.85□□□□□ -0.67
NEK9-209ENST00000556170 ODF3L2Q3SX64 289 aa10.85□□□□□ -0.67
NEK9-209ENST00000556170 MORN3Q6PF18 240 aaPredicted RBP10.85□□□□□ -0.67
NEK9-209ENST00000556170 CDKN2A-AS1Q9UH64 79 aa10.85□□□□□ -0.67
NEK9-209ENST00000556170 Q6ZSN1 163 aa10.85□□□□□ -0.67
NEK9-209ENST00000556170 LRRC75A-AS1Q8N1F1 130 aa10.85□□□□□ -0.67
NEK9-209ENST00000556170 RBMY1BA6NDE4 496 aaKnown RBP10.84□□□□□ -0.67
NEK9-209ENST00000556170 RBMY1EA6NEQ0 496 aaKnown RBP10.84□□□□□ -0.67
NEK9-209ENST00000556170 RNASE1P07998 156 aaKnown RBP10.84□□□□□ -0.67
NEK9-209ENST00000556170 RBMY1DP0C7P1 496 aaKnown RBP10.84□□□□□ -0.67
NEK9-209ENST00000556170 TSPEAR-AS2P59090 65 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 NDUFA11Q86Y39 141 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 CMC4P56277 68 aaPredicted RBP10.84□□□□□ -0.67
NEK9-209ENST00000556170 ATP6V0E2Q8NHE4 81 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 IGLV4-69A0A075B6H9 119 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 RS1O15537 224 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 KLK9Q2XQG4 91 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 FAM19A4Q96LR4 140 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 FAM236AA0A1B0GUQ0 79 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 FAM236BA0A1B0GV22 79 aa10.84□□□□□ -0.67
NEK9-209ENST00000556170 NBEAL2Q6ZNJ1 2754 aa10.83□□□□□ -0.67
NEK9-209ENST00000556170 C5orf38Q86SI9 138 aa10.83□□□□□ -0.68
NEK9-209ENST00000556170 FBN2P35556 2912 aa10.83□□□□□ -0.68
NEK9-209ENST00000556170 K7EQD1 137 aa10.83□□□□□ -0.68
NEK9-209ENST00000556170 C6orf226Q5I0X4 101 aa10.83□□□□□ -0.68
NEK9-209ENST00000556170 ITPR2Q14571 2701 aa10.83□□□□□ -0.68
NEK9-209ENST00000556170 TRAV4A0A0B4J268 109 aa10.82□□□□□ -0.68
NEK9-209ENST00000556170 NDUFA7O95182 113 aa10.82□□□□□ -0.68
NEK9-209ENST00000556170 SLC25A29Q8N8R3 303 aa10.82□□□□□ -0.68
NEK9-209ENST00000556170 A0A0J9YXY3 114 aa10.81□□□□□ -0.68
NEK9-209ENST00000556170 TCL1BO95988 128 aa10.81□□□□□ -0.68
NEK9-209ENST00000556170 TMEM126AQ9H061 195 aa10.81□□□□□ -0.68
NEK9-209ENST00000556170 TMEM223A0PJW6 202 aa10.81□□□□□ -0.68
NEK9-209ENST00000556170 PAX4O43316 350 aa10.81□□□□□ -0.68
NEK9-209ENST00000556170 PLA2G2AP14555 144 aa10.81□□□□□ -0.68
NEK9-209ENST00000556170 RNF152Q8N8N0 203 aa10.81□□□□□ -0.68
NEK9-209ENST00000556170 GCN1Q92616 2671 aaKnown RBP10.8□□□□□ -0.68
NEK9-209ENST00000556170 NXPH4O95158 308 aa10.8□□□□□ -0.68
NEK9-209ENST00000556170 IGHV1-58A0A0C4DH39 117 aa10.8□□□□□ -0.68
NEK9-209ENST00000556170 HERVK_113P63121 156 aa10.8□□□□□ -0.68
NEK9-209ENST00000556170 FAM110AQ9BQ89 295 aa10.8□□□□□ -0.68
NEK9-209ENST00000556170 LOC100131303A0A0U1RQF7 123 aa10.8□□□□□ -0.68
NEK9-209ENST00000556170 F8P00451 2351 aa10.8□□□□□ -0.68
NEK9-209ENST00000556170 TMEM263Q8WUH6 116 aaKnown RBP10.79□□□□□ -0.68
NEK9-209ENST00000556170 CRLF1O75462 422 aa10.79□□□□□ -0.68
NEK9-209ENST00000556170 DNAL4O96015 105 aa10.79□□□□□ -0.68
NEK9-209ENST00000556170 XCL1P47992 114 aa10.79□□□□□ -0.68
NEK9-209ENST00000556170 C5orf47Q569G3 176 aa10.79□□□□□ -0.68
NEK9-209ENST00000556170 NFE4Q86UQ8 179 aa10.79□□□□□ -0.68
NEK9-209ENST00000556170 VSIG2Q96IQ7 327 aa10.79□□□□□ -0.68
NEK9-209ENST00000556170 DNAJC30Q96LL9 226 aa10.79□□□□□ -0.68
NEK9-209ENST00000556170 TRAV25A0A0B4J276 109 aa10.79□□□□□ -0.68
NEK9-209ENST00000556170 TMEM86BQ8N661 226 aa10.78□□□□□ -0.68
NEK9-209ENST00000556170 COPS9Q8WXC6 57 aa10.78□□□□□ -0.68
NEK9-209ENST00000556170 LINC01546A6NGU7 62 aa10.78□□□□□ -0.68
NEK9-209ENST00000556170 F5H768 121 aa10.78□□□□□ -0.68
NEK9-209ENST00000556170 J3KT08 172 aa10.78□□□□□ -0.68
NEK9-209ENST00000556170 MALP21145 153 aa10.78□□□□□ -0.68
NEK9-209ENST00000556170 C1orf43Q9BWL3 253 aa10.77□□□□□ -0.68
NEK9-209ENST00000556170 CUBNO60494 3623 aa10.77□□□□□ -0.68
NEK9-209ENST00000556170 TEP1Q99973 2627 aaKnown RBP10.77□□□□□ -0.69
NEK9-209ENST00000556170 UNC79Q9P2D8 2635 aa10.77□□□□□ -0.69
NEK9-209ENST00000556170 GYPEP15421 78 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms