RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 SH2D1AO60880 128 aa2.9□□□□□ -1.95
ATXN3-229ENST00000554672 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
ATXN3-229ENST00000554672 FAM162BQ5T6X4 162 aa2.9□□□□□ -1.95
ATXN3-229ENST00000554672 RPL7L1Q6DKI1 246 aaKnown RBP2.9□□□□□ -1.95
ATXN3-229ENST00000554672 KCNRGQ8N5I3 272 aa2.9□□□□□ -1.95
ATXN3-229ENST00000554672 HIST1H2BAQ96A08 127 aa2.9□□□□□ -1.95
ATXN3-229ENST00000554672 TMEM243Q9BU79 118 aa2.9□□□□□ -1.95
ATXN3-229ENST00000554672 ZNF471Q9BX82 626 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-229ENST00000554672 ZFP30Q9Y2G7 519 aa2.9□□□□□ -1.95
ATXN3-229ENST00000554672 A0A1W2PNN7 141 aa2.89□□□□□ -1.95
ATXN3-229ENST00000554672 UMAD1C9J7I0 102 aa2.89□□□□□ -1.95
ATXN3-229ENST00000554672 CXCL1P09341 107 aa2.89□□□□□ -1.95
ATXN3-229ENST00000554672 SMIM17P0DL12 118 aa2.89□□□□□ -1.95
ATXN3-229ENST00000554672 ZNF674Q2M3X9 581 aa2.89□□□□□ -1.95
ATXN3-229ENST00000554672 STOML3Q8TAV4 291 aa2.89□□□□□ -1.95
ATXN3-229ENST00000554672 CHCHD10Q8WYQ3 142 aaPredicted RBP2.89□□□□□ -1.95
ATXN3-229ENST00000554672 FXYD6-FXYD2A0A087WZ82 144 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 H0Y9J4 135 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 M0QY20 66 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 UBE2L6O14933 153 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 LTAP01374 205 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 IGLV7-43P04211 117 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 S100A9P06702 114 aaKnown RBP2.88□□□□□ -1.95
ATXN3-229ENST00000554672 RPL13AP40429 203 aaKnown RBP2.88□□□□□ -1.95
ATXN3-229ENST00000554672 SEC61BP60468 96 aaKnown RBP2.88□□□□□ -1.95
ATXN3-229ENST00000554672 GAGE2BQ13066 116 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 LCE3CQ5T5A8 94 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 SPANXN1Q5VSR9 72 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 Q86TA4 180 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 OR10AG1Q8NH19 301 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 CARD19Q96LW7 228 aa2.88□□□□□ -1.95
ATXN3-229ENST00000554672 IGHV1-58A0A0C4DH39 117 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 IGKV3OR2-268A0A0C4DH90 116 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 LOC107984640A0A0U1RRK4 108 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 A0A1B0GVG6 124 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 MAP1LC3B2A6NCE7 125 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 PEX7O00628 323 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 ARPC5O15511 151 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 BCL2L11O43521 198 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 SNAI2O43623 268 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 OR5AL1P0C617 328 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 UBE2D1P51668 147 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 EIF5AP63241 154 aaKnown RBP2.87□□□□□ -1.95
ATXN3-229ENST00000554672 SYCNQ0VAF6 134 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 AKR1C8PQ5T2L2 129 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 TCTE3Q8IZS6 198 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 C11orf52Q96A22 123 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 FMC1Q96HJ9 113 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 PGLYRP4Q96LB8 373 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 MAP1LC3BQ9GZQ8 125 aa2.87□□□□□ -1.95
ATXN3-229ENST00000554672 CARHSP1Q9Y2V2 147 aaKnown RBP2.87□□□□□ -1.95
ATXN3-229ENST00000554672 A0A087WZ39 114 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 MUC21A0A140T8X8 626 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 KRTAP1-4P0C5Y4 121 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 FGF6P10767 208 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 NKX2-5P52952 324 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-229ENST00000554672 SSTP61278 116 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 UBE2G1P62253 170 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 COTL1Q14019 142 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 C9orf116Q5BN46 136 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-229ENST00000554672 AMMECR1LQ6DCA0 310 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 PHF5AQ7RTV0 110 aaKnown RBP2.86□□□□□ -1.95
ATXN3-229ENST00000554672 KRTAP7-1Q8IUC3 87 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 TSKUQ8WUA8 353 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 ISOC2Q96AB3 205 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 SMIM12Q96EX1 92 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 LINC00526Q96FQ7 95 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 AP1S3Q96PC3 154 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 NIT2Q9NQR4 276 aa2.86□□□□□ -1.95
ATXN3-229ENST00000554672 H7C423 109 aa2.85□□□□□ -1.95
ATXN3-229ENST00000554672 TSPAN13O95857 204 aa2.85□□□□□ -1.95
ATXN3-229ENST00000554672 XCL1P47992 114 aa2.85□□□□□ -1.95
ATXN3-229ENST00000554672 LINC01547P58512 204 aaPredicted RBP2.85□□□□□ -1.95
ATXN3-229ENST00000554672 UBE2G2P60604 165 aa2.85□□□□□ -1.95
ATXN3-229ENST00000554672 RNASEKQ6P5S7 137 aaKnown RBP2.85□□□□□ -1.95
ATXN3-229ENST00000554672 RASL11AQ6T310 242 aa2.85□□□□□ -1.95
ATXN3-229ENST00000554672 TMUB2Q71RG4 321 aa2.85□□□□□ -1.95
ATXN3-229ENST00000554672 SFT2D1Q8WV19 159 aa2.85□□□□□ -1.95
ATXN3-229ENST00000554672 IGLV4-69A0A075B6H9 119 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 KANTRA0A1W2PQU2 76 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 SMLR1H3BR10 107 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 APOMO95445 188 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 MGPP08493 103 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 TAGLN2P37802 199 aaKnown RBP2.84□□□□□ -1.95
ATXN3-229ENST00000554672 UBE2V1Q13404 147 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 EIF5AL1Q6IS14 154 aaKnown RBP2.84□□□□□ -1.95
ATXN3-229ENST00000554672 CD164L2Q6UWJ8 174 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 Q75L30 129 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 SLC51BQ86UW2 128 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 NUP35Q8NFH5 326 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 OR5A1Q8NGJ0 315 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 CNFNQ9BYD5 112 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 MANBALQ9NQG1 85 aa2.84□□□□□ -1.95
ATXN3-229ENST00000554672 MUC17Q685J3 4493 aa2.83□□□□□ -1.96
ATXN3-229ENST00000554672 LINC00959A0A1B0GUT2 108 aa2.83□□□□□ -1.96
ATXN3-229ENST00000554672 C19orf71A6NCJ1 209 aa2.83□□□□□ -1.96
ATXN3-229ENST00000554672 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-229ENST00000554672 CCL25O15444 150 aa2.83□□□□□ -1.96
ATXN3-229ENST00000554672 NCR2O95944 276 aa2.83□□□□□ -1.96
ATXN3-229ENST00000554672 IGLC6P0CF74 106 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms