RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 RPL32P62910 135 aaKnown RBP4.31□□□□□ -1.72
SCFD1-212ENST00000554486 IQCJQ1A5X6 159 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 MAPKAPK5-AS1Q8N8E1 139 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 C15orf53Q8NAA6 179 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 ATP6V0E2Q8NHE4 81 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 C18orf32Q8TCD1 76 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 C20orf78Q9BR46 151 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 SMIM2Q9BVW6 85 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 APLNQ9ULZ1 77 aa4.31□□□□□ -1.72
SCFD1-212ENST00000554486 KLK5Q9Y337 293 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-212ENST00000554486 LOC389332A0A1B0GUA5 103 aa4.3□□□□□ -1.72
SCFD1-212ENST00000554486 ESRGQ1W209 222 aa4.3□□□□□ -1.72
SCFD1-212ENST00000554486 LYPD5Q6UWN5 251 aa4.3□□□□□ -1.72
SCFD1-212ENST00000554486 NTM-AS1Q6ZSK4 140 aa4.3□□□□□ -1.72
SCFD1-212ENST00000554486 SH2D6Q7Z4S9 175 aa4.3□□□□□ -1.72
SCFD1-212ENST00000554486 DAZ4Q86SG3 579 aaKnown RBP4.3□□□□□ -1.72
SCFD1-212ENST00000554486 Q8N8P6 123 aa4.3□□□□□ -1.72
SCFD1-212ENST00000554486 DEFB104AQ8WTQ1 72 aa4.3□□□□□ -1.72
SCFD1-212ENST00000554486 GTSF1LQ9H1H1 148 aa4.3□□□□□ -1.72
SCFD1-212ENST00000554486 DAZ3Q9NR90 486 aaKnown RBP4.3□□□□□ -1.72
SCFD1-212ENST00000554486 IGLV9-49A0A0B4J1Y8 123 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 C1orf196B1AJZ1 125 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 C3orf84H3BNL1 204 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 I3L3M4 83 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 TCAPO15273 167 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BKO60814 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BJP06899 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 CFC1BP0CG36 223 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 CFC1P0CG37 223 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 PMCHP20382 165 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BOP23527 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BBP33778 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 IFI27P40305 119 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BDP58876 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BCP62807 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST2H2BEQ16778 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.29□□□□□ -1.72
SCFD1-212ENST00000554486 CASC10Q5T4H9 136 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 STPG4Q8N801 248 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BHQ93079 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BNQ99877 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 HIST1H2BMQ99879 126 aa4.29□□□□□ -1.72
SCFD1-212ENST00000554486 KMT2AQ03164 3969 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 LINC01546A6NGU7 62 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 SMIM1B2RUZ4 78 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 ESDP10768 282 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 TCTAP57738 103 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 Q0VG73 95 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 COTL1Q14019 142 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
SCFD1-212ENST00000554486 NIT1Q86X76 327 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 KIR2DL4Q99706 377 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 CHCHD7Q9BUK0 85 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 NXT2Q9NPJ8 142 aaKnown RBP4.28□□□□□ -1.72
SCFD1-212ENST00000554486 LINC00588Q9Y4M8 146 aa4.28□□□□□ -1.72
SCFD1-212ENST00000554486 TRBV6-8A0A0A6YYG3 113 aa4.27□□□□□ -1.73
SCFD1-212ENST00000554486 IGHV1-24A0A0C4DH33 117 aa4.27□□□□□ -1.73
SCFD1-212ENST00000554486 LINC00614P0C842 121 aa4.27□□□□□ -1.73
SCFD1-212ENST00000554486 TMEM97Q5BJF2 176 aa4.27□□□□□ -1.73
SCFD1-212ENST00000554486 LELP1Q5T871 98 aa4.27□□□□□ -1.73
SCFD1-212ENST00000554486 FA2HQ7L5A8 372 aa4.27□□□□□ -1.73
SCFD1-212ENST00000554486 MRPS16Q9Y3D3 137 aaKnown RBP4.27□□□□□ -1.73
SCFD1-212ENST00000554486 TRBV25-1A0A075B6N4 114 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-212ENST00000554486 IGKV2-29A2NJV5 120 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-212ENST00000554486 K7EMI3 77 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 NUPR1O60356 82 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 SERF1AO75920 110 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 FCER1GP30273 86 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 CCL18P55774 89 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 LAGE3Q14657 143 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 COA6Q5JTJ3 125 aaKnown RBP4.26□□□□□ -1.73
SCFD1-212ENST00000554486 RNASEKQ6P5S7 137 aaKnown RBP4.26□□□□□ -1.73
SCFD1-212ENST00000554486 BAGE3Q86Y29 109 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 WFDC10BQ8IUB3 73 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 TMEM243Q9BU79 118 aa4.26□□□□□ -1.73
SCFD1-212ENST00000554486 A0A096LNJ9 63 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 PRSS1P07477 247 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 NDUFA6P56556 154 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 RAB5BP61020 215 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 RPL39P62891 51 aaKnown RBP4.25□□□□□ -1.73
SCFD1-212ENST00000554486 PMCHL1Q16048 86 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 ORMDL2Q53FV1 153 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 C20orf203Q8NBC4 194 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 CHCHD1Q96BP2 118 aaKnown RBP4.25□□□□□ -1.73
SCFD1-212ENST00000554486 CHCHD5Q9BSY4 110 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 UPK3BQ9BT76 320 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 FRAS1Q86XX4 4008 aa4.25□□□□□ -1.73
SCFD1-212ENST00000554486 TRAV8-6A0A0B4J262 113 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 H7C423 109 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 MPV17L2Q567V2 206 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 LGALS9CQ6DKI2 356 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 C2orf66Q6UXQ4 117 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 NOTCH2NLQ7Z3S9 236 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 MRPL52Q86TS9 123 aaKnown RBP4.24□□□□□ -1.73
SCFD1-212ENST00000554486 UBE2DNLQ8IWF7 75 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 FAM19A2Q8N3H0 131 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 FAM104AQ969W3 186 aa4.24□□□□□ -1.73
SCFD1-212ENST00000554486 TOMM6Q96B49 74 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms