RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 TIMM9Q9Y5J7 89 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 HLA-DRB4X5D2U9 266 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 MEGF8Q7Z7M0 2845 aa2.2□□□□□ -2.06
CD44-219ENST00000525685 TRBV19A0A075B6N1 114 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 A0A0D9SG52 128 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 A0A0J9YX75 114 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 A0A1B0GV50 99 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 SMKR1H3BMG3 65 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 H3BMM0 161 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 H3BQ15 152 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 HLA-DQA1P01909 254 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 PYYP10082 97 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 FABP4P15090 132 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 ADCYAP1P18509 176 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 SNRPD3P62318 126 aaKnown RBP2.19□□□□□ -2.06
CD44-219ENST00000525685 ZNF345Q14585 488 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 RPL7L1Q6DKI1 246 aaKnown RBP2.19□□□□□ -2.06
CD44-219ENST00000525685 MORN3Q6PF18 240 aaPredicted RBP2.19□□□□□ -2.06
CD44-219ENST00000525685 LCN15Q6UWW0 184 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 BPIFA4PQ86YQ2 179 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 PLEKHB2Q96CS7 222 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 FXYD5Q96DB9 178 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 TMEM70Q9BUB7 260 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 RPRMQ9NS64 109 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 TMEM14CQ9P0S9 112 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 FUT9Q9Y231 359 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 MRPS16Q9Y3D3 137 aaKnown RBP2.19□□□□□ -2.06
CD44-219ENST00000525685 MGAM2Q2M2H8 2515 aa2.19□□□□□ -2.06
CD44-219ENST00000525685 PKD1L1Q8TDX9 2849 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 NOTCH1P46531 2555 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HMSDA8MTL9 139 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 A8MTW9 85 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 ZNF705FA8MVS1 300 aaPredicted RBP2.18□□□□□ -2.06
CD44-219ENST00000525685 B4DEV8 164 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 M0R3E3 92 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BKO60814 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BJP06899 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 GPX1P07203 203 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 ZNF705DP0CH99 300 aaPredicted RBP2.18□□□□□ -2.06
CD44-219ENST00000525685 ZNF705BP0CI00 300 aaPredicted RBP2.18□□□□□ -2.06
CD44-219ENST00000525685 NTF3P20783 257 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BOP23527 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BBP33778 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 FXYD7P58549 80 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BDP58876 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BCP62807 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 CACNG7P62955 275 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 UBE2L3P68036 154 aaKnown RBP2.18□□□□□ -2.06
CD44-219ENST00000525685 PDE6HQ13956 83 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 RBMY1FQ15415 496 aaKnown RBP2.18□□□□□ -2.06
CD44-219ENST00000525685 BATFQ16520 125 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST2H2BEQ16778 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 SPINK13Q1W4C9 94 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 MPV17L2Q567V2 206 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.18□□□□□ -2.06
CD44-219ENST00000525685 Q5W150 140 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 EBLN2Q6P2I7 272 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 RASL11AQ6T310 242 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 AMTNQ6UX39 209 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 TMEM256Q8N2U0 113 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 EXOC3-AS1Q8N2X6 119 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 KCNRGQ8N5I3 272 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 OR4B1Q8NGF8 309 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 OR8A1Q8NGG7 326 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BHQ93079 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BNQ99877 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 HIST1H2BMQ99879 126 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 PRADC1Q9BSG0 188 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 SPANXDQ9BXN6 97 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 RNASE7Q9H1E1 156 aaKnown RBP2.18□□□□□ -2.06
CD44-219ENST00000525685 SLC35B3Q9H1N7 401 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 UQCR10Q9UDW1 63 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 KLF12Q9Y4X4 402 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 STARD9Q9P2P6 4700 aa2.18□□□□□ -2.06
CD44-219ENST00000525685 DNAH7Q8WXX0 4024 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 TRAV12-2A0A075B6T6 113 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 IGKV2-40A0A087WW87 121 aaPredicted RBP2.17□□□□□ -2.06
CD44-219ENST00000525685 FAM236DA0A1B0GTK5 79 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 CTXND1A0A1B0GTU2 59 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 KANTRA0A1W2PQU2 76 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 C7orf71A4D174 169 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 RBFOX3A6NFN3 312 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 BPY2O14599 106 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 IGKV2D-40P01614 121 aaPredicted RBP2.17□□□□□ -2.06
CD44-219ENST00000525685 OR5AL1P0C617 328 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 ARL14EPLP0DKL9 152 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 FAM236CP0DP71 79 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 TPT1P13693 172 aaKnown RBP2.17□□□□□ -2.06
CD44-219ENST00000525685 GCHFRP30047 84 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 TAS2R45P59539 299 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 SERF2P84101 59 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 ZNF726P1Q15940 193 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 Q6Q795 121 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 LYPD1Q8N2G4 141 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 RPP25LQ8N5L8 163 aaKnown RBP2.17□□□□□ -2.06
CD44-219ENST00000525685 Q8NAQ8 132 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 GNPNAT1Q96EK6 184 aaPredicted RBP2.17□□□□□ -2.06
CD44-219ENST00000525685 IGF2BP2-AS1Q96M15 143 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 YPEL4Q96NS1 127 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 ODF3Q96PU9 254 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms