RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ZNF664Q8N3J9 261 aa13.87□□□□□ -0.19
PVT1-218ENST00000523328 RNASE7Q9H1E1 156 aaKnown RBP13.87□□□□□ -0.19
PVT1-218ENST00000523328 CDC42SE2Q9NRR3 84 aa13.87□□□□□ -0.19
PVT1-218ENST00000523328 IGLV4-69A0A075B6H9 119 aa13.86□□□□□ -0.19
PVT1-218ENST00000523328 TRBV6-5A0A0K0K1A5 114 aa13.86□□□□□ -0.19
PVT1-218ENST00000523328 TSHBP01222 138 aa13.86□□□□□ -0.19
PVT1-218ENST00000523328 ISOC2Q96AB3 205 aa13.86□□□□□ -0.19
PVT1-218ENST00000523328 MT-ND6P03923 174 aa13.85□□□□□ -0.19
PVT1-218ENST00000523328 BCL2P10415 239 aa13.85□□□□□ -0.19
PVT1-218ENST00000523328 SMIM15Q7Z3B0 74 aa13.85□□□□□ -0.19
PVT1-218ENST00000523328 MRPL52Q86TS9 123 aaKnown RBP13.85□□□□□ -0.19
PVT1-218ENST00000523328 NUP35Q8NFH5 326 aa13.85□□□□□ -0.19
PVT1-218ENST00000523328 MUC2Q02817 5179 aa13.85□□□□□ -0.19
PVT1-218ENST00000523328 K7EN84 100 aa13.84□□□□□ -0.19
PVT1-218ENST00000523328 C9orf116Q5BN46 136 aaPredicted RBP13.84□□□□□ -0.19
PVT1-218ENST00000523328 EIF5AL1Q6IS14 154 aaKnown RBP13.84□□□□□ -0.19
PVT1-218ENST00000523328 MRAP2Q96G30 205 aa13.84□□□□□ -0.19
PVT1-218ENST00000523328 TMEM242Q9NWH2 141 aa13.84□□□□□ -0.19
PVT1-218ENST00000523328 C1orf137Q5JT78 98 aa13.83□□□□□ -0.2
PVT1-218ENST00000523328 PRR26Q8N8Z3 221 aa13.83□□□□□ -0.2
PVT1-218ENST00000523328 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.82□□□□□ -0.2
PVT1-218ENST00000523328 TEX46H3BTG2 121 aa13.82□□□□□ -0.2
PVT1-218ENST00000523328 APOMO95445 188 aa13.82□□□□□ -0.2
PVT1-218ENST00000523328 PHF5AQ7RTV0 110 aaKnown RBP13.81□□□□□ -0.2
PVT1-218ENST00000523328 OCC1Q8TAD7 63 aa13.81□□□□□ -0.2
PVT1-218ENST00000523328 CAMK2N2Q96S95 79 aa13.81□□□□□ -0.2
PVT1-218ENST00000523328 FAM210AQ96ND0 272 aa13.8□□□□□ -0.2
PVT1-218ENST00000523328 BATF3Q9NR55 127 aa13.8□□□□□ -0.2
PVT1-218ENST00000523328 MALP21145 153 aa13.79□□□□□ -0.2
PVT1-218ENST00000523328 POLR2KP53803 58 aaKnown RBP13.79□□□□□ -0.2
PVT1-218ENST00000523328 RGS21Q2M5E4 152 aa13.79□□□□□ -0.2
PVT1-218ENST00000523328 ST20Q9HBF5 79 aa13.79□□□□□ -0.2
PVT1-218ENST00000523328 COX7A2LO14548 114 aa13.78□□□□□ -0.2
PVT1-218ENST00000523328 C2orf48Q96LS8 159 aa13.78□□□□□ -0.2
PVT1-218ENST00000523328 C7orf77A4D0Y5 90 aa13.77□□□□□ -0.21
PVT1-218ENST00000523328 C1orf196B1AJZ1 125 aa13.77□□□□□ -0.21
PVT1-218ENST00000523328 RPL18AQ02543 176 aaKnown RBP13.77□□□□□ -0.21
PVT1-218ENST00000523328 DIRC1Q969H9 104 aa13.77□□□□□ -0.21
PVT1-218ENST00000523328 TRBV27A0A0K0K1C4 114 aa13.76□□□□□ -0.21
PVT1-218ENST00000523328 IGLV7-43P04211 117 aa13.76□□□□□ -0.21
PVT1-218ENST00000523328 OPRPNQ99935 248 aaPredicted RBP13.75□□□□□ -0.21
PVT1-218ENST00000523328 H0Y9J4 135 aa13.73□□□□□ -0.21
PVT1-218ENST00000523328 GATCO43716 136 aaKnown RBP13.73□□□□□ -0.21
PVT1-218ENST00000523328 RNASE13Q5GAN3 156 aaKnown RBP13.73□□□□□ -0.21
PVT1-218ENST00000523328 KRTAP11-1Q8IUC1 163 aa13.73□□□□□ -0.21
PVT1-218ENST00000523328 CSDC2Q9Y534 153 aaKnown RBP13.73□□□□□ -0.21
PVT1-218ENST00000523328 A8MWL6 223 aa13.72□□□□□ -0.21
PVT1-218ENST00000523328 RNF151Q2KHN1 245 aa13.72□□□□□ -0.21
PVT1-218ENST00000523328 C5orf38Q86SI9 138 aa13.72□□□□□ -0.21
PVT1-218ENST00000523328 UBE2D4Q9Y2X8 147 aa13.72□□□□□ -0.21
PVT1-218ENST00000523328 TAGLN2P37802 199 aaKnown RBP13.71□□□□□ -0.21
PVT1-218ENST00000523328 FAM231DQ6ZW35 169 aa13.71□□□□□ -0.21
PVT1-218ENST00000523328 TMEM191AQ9H0A3 160 aa13.71□□□□□ -0.21
PVT1-218ENST00000523328 IGLV1-50A0A075B6I6 118 aa13.7□□□□□ -0.22
PVT1-218ENST00000523328 TRAV13-1A0A0B4J241 112 aa13.7□□□□□ -0.22
PVT1-218ENST00000523328 KRTAP1-4P0C5Y4 121 aa13.7□□□□□ -0.22
PVT1-218ENST00000523328 SPAG11BQ08648 103 aa13.7□□□□□ -0.22
PVT1-218ENST00000523328 KRTAP9-2Q9BYQ4 174 aa13.7□□□□□ -0.22
PVT1-218ENST00000523328 A0A087WZ39 114 aa13.69□□□□□ -0.22
PVT1-218ENST00000523328 RAB4AP20338 218 aa13.69□□□□□ -0.22
PVT1-218ENST00000523328 FAM168BA1KXE4 195 aa13.68□□□□□ -0.22
PVT1-218ENST00000523328 CT83Q5H943 113 aa13.68□□□□□ -0.22
PVT1-218ENST00000523328 AMN1Q8IY45 258 aa13.67□□□□□ -0.22
PVT1-218ENST00000523328 MRPL35Q9NZE8 188 aaKnown RBP13.67□□□□□ -0.22
PVT1-218ENST00000523328 A0A1B0GUT8 65 aa13.66□□□□□ -0.22
PVT1-218ENST00000523328 VCYO14598 125 aa13.66□□□□□ -0.22
PVT1-218ENST00000523328 FCER1GP30273 86 aa13.66□□□□□ -0.22
PVT1-218ENST00000523328 Q6ZUT4 128 aa13.66□□□□□ -0.22
PVT1-218ENST00000523328 OR10D4PQ8NGN7 298 aa13.66□□□□□ -0.22
PVT1-218ENST00000523328 TSKUQ8WUA8 353 aa13.66□□□□□ -0.22
PVT1-218ENST00000523328 BORCS7Q96B45 105 aa13.66□□□□□ -0.22
PVT1-218ENST00000523328 SMAGPQ0VAQ4 97 aa13.65□□□□□ -0.22
PVT1-218ENST00000523328 PRR4Q16378 134 aa13.65□□□□□ -0.22
PVT1-218ENST00000523328 HIGD1CA8MV81 97 aa13.64□□□□□ -0.23
PVT1-218ENST00000523328 SMKR1H3BMG3 65 aa13.64□□□□□ -0.23
PVT1-218ENST00000523328 IMMP2LQ96T52 175 aa13.64□□□□□ -0.23
PVT1-218ENST00000523328 TMEM250H0YL14 139 aa13.63□□□□□ -0.23
PVT1-218ENST00000523328 NRACQ8N912 160 aa13.63□□□□□ -0.23
PVT1-218ENST00000523328 TLX1NBP0CAT3 122 aa13.62□□□□□ -0.23
PVT1-218ENST00000523328 SUMO2P61956 95 aaKnown RBP13.62□□□□□ -0.23
PVT1-218ENST00000523328 C10orf25Q5T742 122 aa13.62□□□□□ -0.23
PVT1-218ENST00000523328 KRTAP7-1Q8IUC3 87 aa13.62□□□□□ -0.23
PVT1-218ENST00000523328 ORAOV1Q8WV07 137 aa13.62□□□□□ -0.23
PVT1-218ENST00000523328 TIMM21Q9BVV7 248 aa13.62□□□□□ -0.23
PVT1-218ENST00000523328 F8WDY8 70 aa13.61□□□□□ -0.23
PVT1-218ENST00000523328 FAM19A5Q7Z5A7 132 aaPredicted RBP13.61□□□□□ -0.23
PVT1-218ENST00000523328 KIR2DL4Q99706 377 aa13.61□□□□□ -0.23
PVT1-218ENST00000523328 IGHV3OR16-9A0A0B4J2B5 98 aa13.6□□□□□ -0.23
PVT1-218ENST00000523328 A0A0U1RQV1 116 aa13.6□□□□□ -0.23
PVT1-218ENST00000523328 NDUFA1O15239 70 aa13.6□□□□□ -0.23
PVT1-218ENST00000523328 FAM104AQ969W3 186 aa13.6□□□□□ -0.23
PVT1-218ENST00000523328 UBE2D1P51668 147 aa13.59□□□□□ -0.23
PVT1-218ENST00000523328 C6orf48Q9UBA6 75 aa13.59□□□□□ -0.23
PVT1-218ENST00000523328 TMEM241Q24JQ0 296 aa13.58□□□□□ -0.24
PVT1-218ENST00000523328 UNQ6190/PRO20217Q6UXQ8 127 aa13.58□□□□□ -0.24
PVT1-218ENST00000523328 SLC51BQ86UW2 128 aa13.58□□□□□ -0.24
PVT1-218ENST00000523328 PPP1R17O96001 155 aa13.57□□□□□ -0.24
PVT1-218ENST00000523328 RPL13AP40429 203 aaKnown RBP13.57□□□□□ -0.24
PVT1-218ENST00000523328 TMEM18Q96B42 140 aa13.57□□□□□ -0.24
PVT1-218ENST00000523328 SMDT1Q9H4I9 107 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms