RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 MEF2BQ02080 365 aaPredicted RBP9.64□□□□□ -0.87
LMNA-223ENST00000515459 MED9Q9NWA0 146 aa9.64□□□□□ -0.87
LMNA-223ENST00000515459 HMSDA8MTL9 139 aa9.63□□□□□ -0.87
LMNA-223ENST00000515459 TEX46H3BTG2 121 aa9.63□□□□□ -0.87
LMNA-223ENST00000515459 EIF5AL1Q6IS14 154 aaKnown RBP9.63□□□□□ -0.87
LMNA-223ENST00000515459 RPP21Q9H633 154 aaKnown RBP9.63□□□□□ -0.87
LMNA-223ENST00000515459 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
LMNA-223ENST00000515459 BCL2P10415 239 aa9.62□□□□□ -0.87
LMNA-223ENST00000515459 ESDP10768 282 aa9.62□□□□□ -0.87
LMNA-223ENST00000515459 FOXA3P55318 350 aaPredicted RBP9.62□□□□□ -0.87
LMNA-223ENST00000515459 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
LMNA-223ENST00000515459 MRAP2Q96G30 205 aa9.62□□□□□ -0.87
LMNA-223ENST00000515459 CDC42SE2Q9NRR3 84 aa9.62□□□□□ -0.87
LMNA-223ENST00000515459 TRBV6-5A0A0K0K1A5 114 aa9.61□□□□□ -0.87
LMNA-223ENST00000515459 MALP21145 153 aa9.61□□□□□ -0.87
LMNA-223ENST00000515459 C9orf116Q5BN46 136 aaPredicted RBP9.61□□□□□ -0.87
LMNA-223ENST00000515459 NUP35Q8NFH5 326 aa9.61□□□□□ -0.87
LMNA-223ENST00000515459 RNASE7Q9H1E1 156 aaKnown RBP9.61□□□□□ -0.87
LMNA-223ENST00000515459 APOMO95445 188 aa9.6□□□□□ -0.87
LMNA-223ENST00000515459 FAM210AQ96ND0 272 aa9.6□□□□□ -0.87
LMNA-223ENST00000515459 CAMK2N2Q96S95 79 aa9.6□□□□□ -0.87
LMNA-223ENST00000515459 TSHBP01222 138 aa9.59□□□□□ -0.87
LMNA-223ENST00000515459 MRPL52Q86TS9 123 aaKnown RBP9.59□□□□□ -0.87
LMNA-223ENST00000515459 PRR26Q8N8Z3 221 aa9.59□□□□□ -0.87
LMNA-223ENST00000515459 TMEM242Q9NWH2 141 aa9.59□□□□□ -0.87
LMNA-223ENST00000515459 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.58□□□□□ -0.88
LMNA-223ENST00000515459 COX7A2LO14548 114 aa9.58□□□□□ -0.88
LMNA-223ENST00000515459 RPL18AQ02543 176 aaKnown RBP9.58□□□□□ -0.88
LMNA-223ENST00000515459 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
LMNA-223ENST00000515459 DIRC1Q969H9 104 aa9.58□□□□□ -0.88
LMNA-223ENST00000515459 ST20Q9HBF5 79 aa9.58□□□□□ -0.88
LMNA-223ENST00000515459 C1orf196B1AJZ1 125 aa9.57□□□□□ -0.88
LMNA-223ENST00000515459 C2orf48Q96LS8 159 aa9.57□□□□□ -0.88
LMNA-223ENST00000515459 C7orf77A4D0Y5 90 aa9.56□□□□□ -0.88
LMNA-223ENST00000515459 K7EN84 100 aa9.56□□□□□ -0.88
LMNA-223ENST00000515459 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
LMNA-223ENST00000515459 OCC1Q8TAD7 63 aa9.56□□□□□ -0.88
LMNA-223ENST00000515459 POLR2KP53803 58 aaKnown RBP9.55□□□□□ -0.88
LMNA-223ENST00000515459 TRBV27A0A0K0K1C4 114 aa9.54□□□□□ -0.88
LMNA-223ENST00000515459 OPRPNQ99935 248 aaPredicted RBP9.54□□□□□ -0.88
LMNA-223ENST00000515459 A8MWL6 223 aa9.53□□□□□ -0.88
LMNA-223ENST00000515459 H0Y9J4 135 aa9.53□□□□□ -0.88
LMNA-223ENST00000515459 TSKUQ8WUA8 353 aa9.53□□□□□ -0.88
LMNA-223ENST00000515459 CSDC2Q9Y534 153 aaKnown RBP9.53□□□□□ -0.88
LMNA-223ENST00000515459 IGLV1-50A0A075B6I6 118 aa9.52□□□□□ -0.89
LMNA-223ENST00000515459 A0A087WZ39 114 aa9.52□□□□□ -0.89
LMNA-223ENST00000515459 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
LMNA-223ENST00000515459 TAGLN2P37802 199 aaKnown RBP9.52□□□□□ -0.89
LMNA-223ENST00000515459 SMAGPQ0VAQ4 97 aa9.52□□□□□ -0.89
LMNA-223ENST00000515459 RNF151Q2KHN1 245 aa9.52□□□□□ -0.89
LMNA-223ENST00000515459 C5orf38Q86SI9 138 aa9.52□□□□□ -0.89
LMNA-223ENST00000515459 BORCS7Q96B45 105 aa9.52□□□□□ -0.89
LMNA-223ENST00000515459 TRAV13-1A0A0B4J241 112 aa9.51□□□□□ -0.89
LMNA-223ENST00000515459 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
LMNA-223ENST00000515459 SPAG11BQ08648 103 aa9.51□□□□□ -0.89
LMNA-223ENST00000515459 RNASE13Q5GAN3 156 aaKnown RBP9.51□□□□□ -0.89
LMNA-223ENST00000515459 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
LMNA-223ENST00000515459 FCER1GP30273 86 aa9.5□□□□□ -0.89
LMNA-223ENST00000515459 PRR4Q16378 134 aa9.5□□□□□ -0.89
LMNA-223ENST00000515459 FAM231DQ6ZW35 169 aa9.5□□□□□ -0.89
LMNA-223ENST00000515459 TMEM191AQ9H0A3 160 aa9.5□□□□□ -0.89
LMNA-223ENST00000515459 UBE2D4Q9Y2X8 147 aa9.5□□□□□ -0.89
LMNA-223ENST00000515459 VCYO14598 125 aa9.49□□□□□ -0.89
LMNA-223ENST00000515459 RAB4AP20338 218 aa9.49□□□□□ -0.89
LMNA-223ENST00000515459 CT83Q5H943 113 aa9.49□□□□□ -0.89
LMNA-223ENST00000515459 OR10D4PQ8NGN7 298 aa9.49□□□□□ -0.89
LMNA-223ENST00000515459 IMMP2LQ96T52 175 aa9.49□□□□□ -0.89
LMNA-223ENST00000515459 MRPL35Q9NZE8 188 aaKnown RBP9.49□□□□□ -0.89
LMNA-223ENST00000515459 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
LMNA-223ENST00000515459 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
LMNA-223ENST00000515459 UBE2D1P51668 147 aa9.48□□□□□ -0.89
LMNA-223ENST00000515459 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
LMNA-223ENST00000515459 MUC2Q02817 5179 aa9.47□□□□□ -0.89
LMNA-223ENST00000515459 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
LMNA-223ENST00000515459 F8WDY8 70 aa9.47□□□□□ -0.89
LMNA-223ENST00000515459 AMN1Q8IY45 258 aa9.47□□□□□ -0.89
LMNA-223ENST00000515459 HIGD1CA8MV81 97 aa9.46□□□□□ -0.9
LMNA-223ENST00000515459 RPL13AP40429 203 aaKnown RBP9.46□□□□□ -0.9
LMNA-223ENST00000515459 Q6ZUT4 128 aa9.46□□□□□ -0.9
LMNA-223ENST00000515459 FAM19A5Q7Z5A7 132 aaPredicted RBP9.46□□□□□ -0.9
LMNA-223ENST00000515459 ORAOV1Q8WV07 137 aa9.46□□□□□ -0.9
LMNA-223ENST00000515459 KIR2DL4Q99706 377 aa9.46□□□□□ -0.9
LMNA-223ENST00000515459 NDUFA1O15239 70 aa9.45□□□□□ -0.9
LMNA-223ENST00000515459 PPP1R17O96001 155 aa9.45□□□□□ -0.9
LMNA-223ENST00000515459 SUMO2P61956 95 aaKnown RBP9.45□□□□□ -0.9
LMNA-223ENST00000515459 TMEM18Q96B42 140 aa9.45□□□□□ -0.9
LMNA-223ENST00000515459 TIMM21Q9BVV7 248 aa9.45□□□□□ -0.9
LMNA-223ENST00000515459 TMEM250H0YL14 139 aa9.44□□□□□ -0.9
LMNA-223ENST00000515459 SMKR1H3BMG3 65 aa9.44□□□□□ -0.9
LMNA-223ENST00000515459 TLX1NBP0CAT3 122 aa9.44□□□□□ -0.9
LMNA-223ENST00000515459 TMEM241Q24JQ0 296 aa9.44□□□□□ -0.9
LMNA-223ENST00000515459 GAGE2EQ4V326 116 aa9.43□□□□□ -0.9
LMNA-223ENST00000515459 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
LMNA-223ENST00000515459 NRACQ8N912 160 aa9.43□□□□□ -0.9
LMNA-223ENST00000515459 GAGE2DQ9UEU5 116 aa9.43□□□□□ -0.9
LMNA-223ENST00000515459 UBE2BP63146 152 aa9.42□□□□□ -0.9
LMNA-223ENST00000515459 IGHV3OR16-9A0A0B4J2B5 98 aa9.41□□□□□ -0.9
LMNA-223ENST00000515459 M0QXV9 152 aa9.41□□□□□ -0.9
LMNA-223ENST00000515459 PPP1R2P9O14990 202 aa9.41□□□□□ -0.9
LMNA-223ENST00000515459 UNQ6190/PRO20217Q6UXQ8 127 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 242.7 ms