RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 LXNQ9BS40 222 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 C10orf95Q9H7T3 257 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 JPT1Q9UK76 154 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 PSME4Q14997 1843 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 CITO14578 2027 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 A0A1B0GV72 72 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 LOC107986453A0A1B0GWG9 222 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 ARL5CA6NH57 179 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 H7BYZ3 331 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 K7EIL1 84 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 PIN1P1O15428 100 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 FABP1P07148 127 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 SAA1P0DJI8 122 aaPredicted RBP0.32□□□□□ -2.36
ITGB1-216ENST00000493758 CCL4P13236 92 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 S100A5P33763 92 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 SRP9P49458 86 aaKnown RBP0.32□□□□□ -2.36
ITGB1-216ENST00000493758 LSM3P62310 102 aaKnown RBP0.32□□□□□ -2.36
ITGB1-216ENST00000493758 C6orf52Q5T4I8 152 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 C3orf62Q6ZUJ4 267 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.32□□□□□ -2.36
ITGB1-216ENST00000493758 CLEC2BQ92478 149 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 CCL19Q99731 98 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 TAF9BQ9HBM6 251 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 MYH2Q9UKX2 1941 aa0.32□□□□□ -2.36
ITGB1-216ENST00000493758 MYO7BQ6PIF6 2116 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 PTPRDP23468 1912 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 CD163L1Q9NR16 1453 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.31□□□□□ -2.36
ITGB1-216ENST00000493758 TRAV13-1A0A0B4J241 112 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 A0A0D9SG42 100 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 LOC107984156A0A0G2JMH3 177 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 TRBV27A0A0K0K1C4 114 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 A0A1W2PRE2 83 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 IGHV3-30P01768 117 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 GYPBP06028 91 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 IGHV3-30-5P0DP03 117 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 RPS3P23396 243 aaKnown RBP eCLIP0.31□□□□□ -2.36
ITGB1-216ENST00000493758 CAV3P56539 151 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 DNAJB13P59910 316 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 SNRPD3P62318 126 aaKnown RBP0.31□□□□□ -2.36
ITGB1-216ENST00000493758 ARL17AQ8IVW1 177 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 TEX29Q8N6K0 151 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 TCTEX1D1Q8N7M0 179 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 TMEM229BQ8NBD8 167 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 LPAR5Q9H1C0 372 aa0.31□□□□□ -2.36
ITGB1-216ENST00000493758 A0A1W2PPB8 328 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 A0A1W2PRS3 328 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 PRORSD1PA6NEY8 169 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 A6NN06 94 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 KIR3DP1A8MWS1 328 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 H3BMG7 143 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 IFNA21P01568 189 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 MT4P47944 62 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 SPINK7P58062 85 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 CCSMST1Q4G0I0 132 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 HRCT1Q6UXD1 115 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 IZUMO2Q6UXV1 221 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 MORN4Q8NDC4 146 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 OR9Q1Q8NGQ5 310 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 THEM6Q8WUY1 208 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 PLAC4Q8WY50 150 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 CENPHQ9H3R5 247 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 FKBP11Q9NYL4 201 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 TRAPPC2LQ9UL33 140 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 MED31Q9Y3C7 131 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 MPC1Q9Y5U8 109 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 DSPPQ9NZW4 1301 aa0.3□□□□□ -2.36
ITGB1-216ENST00000493758 MYH3P11055 1940 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 MYH13Q9UKX3 1938 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 TRBV7-6A0A0J9YX20 115 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 IFITM5A6NNB3 132 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 EDF1O60869 148 aaKnown RBP0.29□□□□□ -2.36
ITGB1-216ENST00000493758 SPRR2EP22531 72 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 CRYGSP22914 178 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 SPRR2BP35325 72 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 SPRR2AP35326 72 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 ETV6P41212 452 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 POLR2HP52434 150 aaKnown RBP0.29□□□□□ -2.36
ITGB1-216ENST00000493758 GTF2A1P52655 376 aaPredicted RBP0.29□□□□□ -2.36
ITGB1-216ENST00000493758 BLCAPP62952 87 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 QRFPP83859 136 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 TFAMQ00059 246 aaKnown RBP0.29□□□□□ -2.36
ITGB1-216ENST00000493758 SAMD13Q5VXD3 122 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 XAF1Q6GPH4 301 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 TOMM20LQ6UXN7 152 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 OR8J3Q8NGG0 315 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 NABP2Q9BQ15 211 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 SELENOSQ9BQE4 189 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 C19orf12Q9NSK7 152 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 PLAC8Q9NZF1 115 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 KIAA1549LQ6ZVL6 1849 aa0.29□□□□□ -2.36
ITGB1-216ENST00000493758 LOC107984640A0A0U1RRK4 108 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 TMEM30CPA0ZSE6 113 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 TMEM189A5PLL7 270 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 PGRMC1O00264 195 aaKnown RBP0.28□□□□□ -2.36
ITGB1-216ENST00000493758 SLC25A4P12235 298 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 EVI2AP22794 236 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 S100GP29377 79 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 SPINK13Q1W4C9 94 aa0.28□□□□□ -2.36
ITGB1-216ENST00000493758 TMEM128Q5BJH2 165 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms