RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 DEFB113Q30KQ7 82 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 CSAG1Q6PB30 78 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 KLHL30-AS1Q8NEE0 82 aa2.74□□□□□ -1.97
BRCA1-220ENST00000492859 NUP214P35658 2090 aaPredicted RBP2.74□□□□□ -1.97
BRCA1-220ENST00000492859 IGLV10-54A0A075B6I4 117 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 IGHV1-18A0A0C4DH31 117 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 IGKV3D-7A0A0C4DH55 119 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 CLPSL1A2RUU4 121 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 WISP3O95389 354 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-220ENST00000492859 IGLV1-47P01700 117 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 P0C879 139 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 LINC00483Q53H64 154 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.73□□□□□ -1.97
BRCA1-220ENST00000492859 Q6ZR54 194 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 Q8N377 158 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 TXNDC17Q9BRA2 123 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 DEFB126Q9BYW3 111 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 ZNRD1Q9P1U0 126 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 KIF25-AS1Q9Y6Z4 181 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 V9GYV3 84 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 DUOX1Q9NRD9 1551 aa2.73□□□□□ -1.97
BRCA1-220ENST00000492859 DNAJC13O75165 2243 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 IGLV7-46A0A075B6I9 117 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 TRAV10A0A0B4J240 114 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 IGHV3-64DA0A0J9YX35 117 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 D6R8Y8 96 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 H3BQ85 93 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 CFC1P0CG37 223 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 SAA2P0DJI9 122 aaPredicted RBP2.72□□□□□ -1.97
BRCA1-220ENST00000492859 MUSTN1Q8IVN3 82 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 TMEM254Q8TBM7 123 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 C16orf74Q96GX8 76 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 CR1P17927 2039 aa2.72□□□□□ -1.97
BRCA1-220ENST00000492859 INTS1Q8N201 2190 aaKnown RBP2.71□□□□□ -1.97
BRCA1-220ENST00000492859 SMIM27A0A1W2PRY6 76 aa2.71□□□□□ -1.98
BRCA1-220ENST00000492859 IGLV1-44P01699 117 aa2.71□□□□□ -1.98
BRCA1-220ENST00000492859 IGHV3-33P01772 117 aa2.71□□□□□ -1.98
BRCA1-220ENST00000492859 GIG44P09565 113 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-220ENST00000492859 CISD3P0C7P0 127 aa2.71□□□□□ -1.98
BRCA1-220ENST00000492859 C14orf178Q8N769 122 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-220ENST00000492859 Q8N9P0 234 aaPredicted RBP2.71□□□□□ -1.98
BRCA1-220ENST00000492859 Q8NAQ8 132 aa2.71□□□□□ -1.98
BRCA1-220ENST00000492859 PRR15LQ9BU68 103 aa2.71□□□□□ -1.98
BRCA1-220ENST00000492859 MINOS1-NBL1R4GNA1 71 aa2.71□□□□□ -1.98
BRCA1-220ENST00000492859 MED12Q93074 2177 aa2.71□□□□□ -1.98
BRCA1-220ENST00000492859 A0A1W2PNM2 257 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 ODF3BA8MYP8 253 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 SERF2P84101 59 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 Q6ZS52 159 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 FDCSPQ8NFU4 85 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 LINC00167Q96N53 147 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 HIGD2BQ4VC39 106 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 SPANXN5Q5MJ07 72 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 KRTAP26-1Q6PEX3 210 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 RPL36ALQ969Q0 106 aaKnown RBP2.7□□□□□ -1.98
BRCA1-220ENST00000492859 TMEM14AQ9Y6G1 99 aa2.7□□□□□ -1.98
BRCA1-220ENST00000492859 DOCK10Q96BY6 2186 aa2.69□□□□□ -1.98
BRCA1-220ENST00000492859 IGLV2-18A0A075B6J9 118 aa2.69□□□□□ -1.98
BRCA1-220ENST00000492859 HMGA2P52926 109 aa2.69□□□□□ -1.98
BRCA1-220ENST00000492859 SPANXA2-OT1Q8N9U9 137 aa2.69□□□□□ -1.98
BRCA1-220ENST00000492859 PRRC2BQ5JSZ5 2229 aaKnown RBP2.69□□□□□ -1.98
BRCA1-220ENST00000492859 PLXNB2O15031 1838 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 A0A0G2JMZ2 1700 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 LRRC37A2A6NM11 1700 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 LRRC37AA6NMS7 1700 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 NRXN2Q9P2S2 1712 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 CTXND1A0A1B0GTU2 59 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 LRCOL1A6NCL2 159 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 DNAL4O96015 105 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 ELOF1P60002 83 aaKnown RBP2.68□□□□□ -1.98
BRCA1-220ENST00000492859 Q1RN00 199 aa2.68□□□□□ -1.98
BRCA1-220ENST00000492859 TMEM263Q8WUH6 116 aaKnown RBP2.68□□□□□ -1.98
BRCA1-220ENST00000492859 COL5A1P20908 1838 aaPredicted RBP2.68□□□□□ -1.98
BRCA1-220ENST00000492859 ARFGEF3Q5TH69 2177 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 A0A0J9YY99 117 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 TRBV10-1A0A0K0K1A3 114 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 TRBV6-5A0A0K0K1A5 114 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 IGHV3-53P01767 116 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 IGHV3-30P01768 117 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 IGHV3-30-5P0DP03 117 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 ZNF833PQ6ZTB9 187 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 PRR34Q9NV39 138 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 ORMDL1Q9P0S3 153 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 LENEPQ9Y5L5 61 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 LHFPL6Q9Y693 200 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 C4AP0C0L4 1744 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 LMO7Q8WWI1 1683 aa2.67□□□□□ -1.98
BRCA1-220ENST00000492859 A0A096LNJ9 63 aa2.66□□□□□ -1.98
BRCA1-220ENST00000492859 A0A1W2PPR1 153 aa2.66□□□□□ -1.98
BRCA1-220ENST00000492859 HIGD1CA8MV81 97 aa2.66□□□□□ -1.98
BRCA1-220ENST00000492859 PLA2G2AP14555 144 aa2.66□□□□□ -1.98
BRCA1-220ENST00000492859 C9orf129Q5T035 196 aaKnown RBP2.66□□□□□ -1.98
BRCA1-220ENST00000492859 PPP1R17O96001 155 aa2.66□□□□□ -1.98
BRCA1-220ENST00000492859 IGKV1-17P01599 117 aa2.66□□□□□ -1.98
BRCA1-220ENST00000492859 KPRPQ5T749 579 aaPredicted RBP2.66□□□□□ -1.98
BRCA1-220ENST00000492859 Q9BRP9 147 aa2.66□□□□□ -1.98
BRCA1-220ENST00000492859 LINC00846Q9NV44 126 aa2.66□□□□□ -1.98
BRCA1-220ENST00000492859 LRRC37A3O60309 1634 aa2.65□□□□□ -1.98
BRCA1-220ENST00000492859 IGHV3-64A0A075B6Q5 118 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms