RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 DYNC2LI1Q8TCX1 351 aa1.62□□□□□ -2.15
UBR4-215ENST00000492606 DNAJC9Q8WXX5 260 aa1.62□□□□□ -2.15
UBR4-215ENST00000492606 YPEL4Q96NS1 127 aa1.62□□□□□ -2.15
UBR4-215ENST00000492606 TSC22D3Q99576 134 aa1.62□□□□□ -2.15
UBR4-215ENST00000492606 HOPXQ9BPY8 73 aaPredicted RBP1.62□□□□□ -2.15
UBR4-215ENST00000492606 PAIP2Q9BPZ3 127 aaKnown RBP1.62□□□□□ -2.15
UBR4-215ENST00000492606 LPAR5Q9H1C0 372 aa1.62□□□□□ -2.15
UBR4-215ENST00000492606 ZNF492Q9P255 531 aa1.62□□□□□ -2.15
UBR4-215ENST00000492606 SSR3Q9UNL2 185 aa1.62□□□□□ -2.15
UBR4-215ENST00000492606 PHLDA3Q9Y5J5 127 aa1.62□□□□□ -2.15
UBR4-215ENST00000492606 TMEM212A6NML5 194 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 BBIP1A8MTZ0 92 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 SNRPGP15A8MWD9 76 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 BCE1O60756 84 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 APOMO95445 188 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 HSD17B12Q53GQ0 312 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 COQ5Q5HYK3 327 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 UBE2NLQ5JXB2 153 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 HACD4Q5VWC8 232 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 LAIR2Q6ISS4 152 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 AMN1Q8IY45 258 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 HS3ST5Q8IZT8 346 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 MRAP2Q96G30 205 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 SEC22CQ9BRL7 303 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 IMUPQ9GZP8 106 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 AGPAT4-IT1Q9H0P7 198 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 GID8Q9NWU2 228 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 AP4S1Q9Y587 144 aa1.61□□□□□ -2.15
UBR4-215ENST00000492606 FXYD6-FXYD2A0A087WZ82 144 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 A0A0G2JND7 137 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 H3BQ85 93 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 CD2P06729 351 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 COX4I1P13073 169 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 HRES1P13985 223 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 RPS29P62273 56 aaKnown RBP1.6□□□□□ -2.15
UBR4-215ENST00000492606 UBE2D2P62837 147 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 CATR1Q13166 79 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 XAF1Q6GPH4 301 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 Q6ZS49 121 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 ARPINQ7Z6K5 226 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 C1orf64Q8NEQ6 169 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 OBSCN-AS1Q96MR7 158 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 C9orf16Q9BUW7 83 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 MRPS26Q9BYN8 205 aaKnown RBP1.6□□□□□ -2.15
UBR4-215ENST00000492606 C14orf166Q9Y224 244 aaKnown RBP1.6□□□□□ -2.15
UBR4-215ENST00000492606 R4GN34 69 aa1.6□□□□□ -2.15
UBR4-215ENST00000492606 TRBV20-1A0A075B6N2 111 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 A0A087WXM4 84 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 H3BRN7 92 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 CBX5P45973 191 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 TMBIM6P55061 237 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 UBE2G2P60604 165 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 RPS11P62280 158 aaKnown RBP eCLIP1.59□□□□□ -2.15
UBR4-215ENST00000492606 SURF2Q15527 256 aaPredicted RBP1.59□□□□□ -2.15
UBR4-215ENST00000492606 ZNF818PQ6ZRF7 136 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 DTD1Q8TEA8 209 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 RTBDNQ9BSG5 229 aaPredicted RBP1.59□□□□□ -2.15
UBR4-215ENST00000492606 RSL24D1Q9UHA3 163 aaKnown RBP1.59□□□□□ -2.15
UBR4-215ENST00000492606 NAGKQ9UJ70 344 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 POMPQ9Y244 141 aa1.59□□□□□ -2.15
UBR4-215ENST00000492606 J3QRE1 110 aa1.58□□□□□ -2.16
UBR4-215ENST00000492606 IGKV1-5P01602 117 aa1.58□□□□□ -2.16
UBR4-215ENST00000492606 RPL7P18124 248 aaKnown RBP1.58□□□□□ -2.16
UBR4-215ENST00000492606 MSMO1Q15800 293 aa1.58□□□□□ -2.16
UBR4-215ENST00000492606 KRTAP25-1Q3LHN0 102 aa1.58□□□□□ -2.16
UBR4-215ENST00000492606 PDZD11Q5EBL8 140 aa1.58□□□□□ -2.16
UBR4-215ENST00000492606 IZUMO2Q6UXV1 221 aa1.58□□□□□ -2.16
UBR4-215ENST00000492606 DEFB107AQ8IZN7 70 aa1.58□□□□□ -2.16
UBR4-215ENST00000492606 S100ZQ8WXG8 99 aa1.58□□□□□ -2.16
UBR4-215ENST00000492606 OBSCNQ5VST9 7968 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 TCRBV3S1A0A5B6 114 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 PFDN1O60925 122 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 CST7O76096 145 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 TYMSP04818 313 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 NMBP08949 121 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 SCGB1C2P0DMR2 95 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 GABARAPL2P60520 117 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 PKIAP61925 76 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 NDUFA5Q16718 116 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 C4orf26Q17RF5 130 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 SCGB1C1Q8TD33 95 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 BORCS5Q969J3 196 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 MGLLQ99685 303 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 ANAPC13Q9BS18 74 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 SCN3BQ9NY72 215 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 PAIP2BQ9ULR5 123 aaKnown RBP1.57□□□□□ -2.16
UBR4-215ENST00000492606 TPRKBQ9Y3C4 175 aa1.57□□□□□ -2.16
UBR4-215ENST00000492606 IGKV2-40A0A087WW87 121 aaPredicted RBP1.56□□□□□ -2.16
UBR4-215ENST00000492606 IGHV1-58A0A0C4DH39 117 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 IGKV3OR2-268A0A0C4DH90 116 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 DAPL1A0PJW8 107 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 CCDC160A6NGH7 325 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 FNDC10F2Z333 226 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 G3V2T6 193 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 M0R3E3 92 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 GNGT2O14610 69 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 LTAP01374 205 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 IGKV2D-40P01614 121 aaPredicted RBP1.56□□□□□ -2.16
UBR4-215ENST00000492606 UBBP0CG47 229 aa1.56□□□□□ -2.16
UBR4-215ENST00000492606 SULT1A2P50226 295 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms