RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 IGHV1-24A0A0C4DH33 117 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 IGKV2-29A2NJV5 120 aaPredicted RBP3.81□□□□□ -1.8
CDHR3-213ENST00000488386 PANO1I0J062 215 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 GATCO43716 136 aaKnown RBP3.81□□□□□ -1.8
CDHR3-213ENST00000488386 TRGC1P0CF51 173 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 REG3AQ06141 175 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 ELOBQ15370 118 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 IQCJQ1A5X6 159 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.81□□□□□ -1.8
CDHR3-213ENST00000488386 CIRBP-AS1Q8TBR5 109 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 SMIM12Q96EX1 92 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 FAT3Q8TDW7 4589 aa3.81□□□□□ -1.8
CDHR3-213ENST00000488386 XKRY2A2RUG3 117 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 F2Z2F3 143 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 H7C1H1 209 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 RPL24P83731 157 aaKnown RBP3.8□□□□□ -1.8
CDHR3-213ENST00000488386 MIAQ16674 131 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 LYPD6BQ8NI32 183 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 TMEM243Q9BU79 118 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 EIF5A2Q9GZV4 153 aaKnown RBP3.8□□□□□ -1.8
CDHR3-213ENST00000488386 NIT2Q9NQR4 276 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 BIN3Q9NQY0 253 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 PRR34Q9NV39 138 aa3.8□□□□□ -1.8
CDHR3-213ENST00000488386 C9JQL5 133 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 SMKR1H3BMG3 65 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 UBE2L6O14933 153 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 NCR2O95944 276 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 SRP19P09132 144 aaKnown RBP3.79□□□□□ -1.8
CDHR3-213ENST00000488386 RPS10P46783 165 aaKnown RBP3.79□□□□□ -1.8
CDHR3-213ENST00000488386 COTL1Q14019 142 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 HIGD2BQ4VC39 106 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 TMEM97Q5BJF2 176 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 LINC01551Q86U37 167 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 SMIM7Q9BQ49 75 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 CHAC1Q9BUX1 264 aa3.79□□□□□ -1.8
CDHR3-213ENST00000488386 ZNF727A8MUV8 499 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 TMEM250H0YL14 139 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 HNRNPA3P51991 378 aaKnown RBP3.78□□□□□ -1.8
CDHR3-213ENST00000488386 LINC01547P58512 204 aaPredicted RBP3.78□□□□□ -1.8
CDHR3-213ENST00000488386 KRTAP10-4P60372 401 aaPredicted RBP3.78□□□□□ -1.8
CDHR3-213ENST00000488386 RNASEKQ6P5S7 137 aaKnown RBP3.78□□□□□ -1.8
CDHR3-213ENST00000488386 FAM231DQ6ZW35 169 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 AMN1Q8IY45 258 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 RNF185Q96GF1 192 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 FAM210AQ96ND0 272 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 CNFNQ9BYD5 112 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 TMEM242Q9NWH2 141 aa3.78□□□□□ -1.8
CDHR3-213ENST00000488386 PKHD1L1Q86WI1 4243 aa3.78□□□□□ -1.81
CDHR3-213ENST00000488386 FAM231BA6NCW3 169 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 SDHAF1A6NFY7 115 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 HIGD1CA8MV81 97 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 A8MWL6 223 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 APCSP02743 223 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 PKIAP61925 76 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 UBE2V1Q13404 147 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 C14orf177Q52M58 125 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 AMMECR1LQ6DCA0 310 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 C15orf56Q8N910 161 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 LINC00526Q96FQ7 95 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 SMDT1Q9H4I9 107 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 V9GYV3 84 aa3.77□□□□□ -1.81
CDHR3-213ENST00000488386 TSHBP01222 138 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 FGF6P10767 208 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 RAB4AP20338 218 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 PMCHP20382 165 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 MT3P25713 68 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 RPL23P62829 140 aaKnown RBP3.76□□□□□ -1.81
CDHR3-213ENST00000488386 ADIRFQ15847 76 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
CDHR3-213ENST00000488386 SDIM1Q6ZPB5 146 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 SMIM15Q7Z3B0 74 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 NUP35Q8NFH5 326 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 TSKUQ8WUA8 353 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 CHCHD10Q8WYQ3 142 aaPredicted RBP3.76□□□□□ -1.81
CDHR3-213ENST00000488386 ISOC2Q96AB3 205 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 BORCS7Q96B45 105 aa3.76□□□□□ -1.81
CDHR3-213ENST00000488386 SRRM2Q9UQ35 2752 aaKnown RBP3.76□□□□□ -1.81
CDHR3-213ENST00000488386 TRAV8-4A0A0B4J246 113 aa3.75□□□□□ -1.81
CDHR3-213ENST00000488386 A0A1B0GUT8 65 aa3.75□□□□□ -1.81
CDHR3-213ENST00000488386 I3L3M4 83 aa3.75□□□□□ -1.81
CDHR3-213ENST00000488386 XCL1P47992 114 aa3.75□□□□□ -1.81
CDHR3-213ENST00000488386 RPL37AP61513 92 aaKnown RBP3.75□□□□□ -1.81
CDHR3-213ENST00000488386 TMEM191AQ9H0A3 160 aa3.75□□□□□ -1.81
CDHR3-213ENST00000488386 ST20Q9HBF5 79 aa3.75□□□□□ -1.81
CDHR3-213ENST00000488386 OSTCQ9NRP0 149 aa3.75□□□□□ -1.81
CDHR3-213ENST00000488386 IGKV2-24A0A0C4DH68 120 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 CCL25O15444 150 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 CFC1BP0CG36 223 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 CFC1P0CG37 223 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 ESDP10768 282 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 POLR2KP53803 58 aaKnown RBP3.74□□□□□ -1.81
CDHR3-213ENST00000488386 COX6A2Q02221 97 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 TMEM241Q24JQ0 296 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 MRPL51Q4U2R6 128 aaKnown RBP3.74□□□□□ -1.81
CDHR3-213ENST00000488386 MRPL54Q6P161 138 aaKnown RBP3.74□□□□□ -1.81
CDHR3-213ENST00000488386 TEX261Q6UWH6 196 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 DPH3Q96FX2 82 aa3.74□□□□□ -1.81
CDHR3-213ENST00000488386 IGHV3-64A0A075B6Q5 118 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms