RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 IFI27P40305 119 aaPredicted RBP11.77□□□□□ -0.53
MCF2L-226ENST00000486210 Q8N8P6 123 aa11.77□□□□□ -0.53
MCF2L-226ENST00000486210 MPV17L2Q567V2 206 aa11.76□□□□□ -0.53
MCF2L-226ENST00000486210 HMCN2Q8NDA2 5059 aa11.75□□□□□ -0.53
MCF2L-226ENST00000486210 UBR4Q5T4S7 5183 aa11.75□□□□□ -0.53
MCF2L-226ENST00000486210 FAM229AH3BQW9 127 aa11.74□□□□□ -0.53
MCF2L-226ENST00000486210 GCSHP23434 173 aa11.74□□□□□ -0.53
MCF2L-226ENST00000486210 Q8N976 141 aa11.74□□□□□ -0.53
MCF2L-226ENST00000486210 C18orf32Q8TCD1 76 aa11.74□□□□□ -0.53
MCF2L-226ENST00000486210 A0A087WX48 190 aa11.73□□□□□ -0.53
MCF2L-226ENST00000486210 UBE2L6O14933 153 aa11.73□□□□□ -0.53
MCF2L-226ENST00000486210 RBX1P62877 108 aa11.73□□□□□ -0.53
MCF2L-226ENST00000486210 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
MCF2L-226ENST00000486210 IGLV4-60A0A075B6I1 120 aa11.72□□□□□ -0.53
MCF2L-226ENST00000486210 J3QL48 77 aa11.72□□□□□ -0.53
MCF2L-226ENST00000486210 PRSS3P2Q8NHM4 247 aa11.72□□□□□ -0.53
MCF2L-226ENST00000486210 URB1-AS1Q96HZ7 61 aa11.72□□□□□ -0.53
MCF2L-226ENST00000486210 IGLV5-52A0A0A0MRZ9 124 aa11.71□□□□□ -0.53
MCF2L-226ENST00000486210 FGF6P10767 208 aa11.71□□□□□ -0.53
MCF2L-226ENST00000486210 RPL39P62891 51 aaKnown RBP11.71□□□□□ -0.53
MCF2L-226ENST00000486210 C20orf203Q8NBC4 194 aa11.71□□□□□ -0.53
MCF2L-226ENST00000486210 NTN5Q8WTR8 489 aaPredicted RBP11.71□□□□□ -0.53
MCF2L-226ENST00000486210 KLK12Q9UKR0 248 aa11.71□□□□□ -0.53
MCF2L-226ENST00000486210 H7C423 109 aa11.7□□□□□ -0.54
MCF2L-226ENST00000486210 PKIAP61925 76 aa11.7□□□□□ -0.54
MCF2L-226ENST00000486210 Q9HAA7 133 aa11.7□□□□□ -0.54
MCF2L-226ENST00000486210 A0A1B0GUV1 79 aa11.69□□□□□ -0.54
MCF2L-226ENST00000486210 LINC01546A6NGU7 62 aa11.69□□□□□ -0.54
MCF2L-226ENST00000486210 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
MCF2L-226ENST00000486210 LAGE3Q14657 143 aa11.69□□□□□ -0.54
MCF2L-226ENST00000486210 RNASEKQ6P5S7 137 aaKnown RBP11.69□□□□□ -0.54
MCF2L-226ENST00000486210 ANGP03950 147 aaKnown RBP11.68□□□□□ -0.54
MCF2L-226ENST00000486210 AMMECR1LQ6DCA0 310 aa11.68□□□□□ -0.54
MCF2L-226ENST00000486210 FA2HQ7L5A8 372 aa11.68□□□□□ -0.54
MCF2L-226ENST00000486210 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
MCF2L-226ENST00000486210 ORMDL2Q53FV1 153 aa11.67□□□□□ -0.54
MCF2L-226ENST00000486210 MRPL52Q86TS9 123 aaKnown RBP11.67□□□□□ -0.54
MCF2L-226ENST00000486210 TM2D2Q9BX73 214 aa11.67□□□□□ -0.54
MCF2L-226ENST00000486210 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
MCF2L-226ENST00000486210 K7EMI3 77 aa11.66□□□□□ -0.54
MCF2L-226ENST00000486210 LINC00614P0C842 121 aa11.66□□□□□ -0.54
MCF2L-226ENST00000486210 CLPSL2Q6UWE3 100 aa11.66□□□□□ -0.54
MCF2L-226ENST00000486210 ENHOQ6UWT2 76 aa11.66□□□□□ -0.54
MCF2L-226ENST00000486210 LINC00269Q8N2A0 174 aa11.66□□□□□ -0.54
MCF2L-226ENST00000486210 UBE2WQ96B02 151 aa11.66□□□□□ -0.54
MCF2L-226ENST00000486210 KRTAP29-1A8MX34 341 aaPredicted RBP11.65□□□□□ -0.54
MCF2L-226ENST00000486210 C2orf66Q6UXQ4 117 aa11.65□□□□□ -0.54
MCF2L-226ENST00000486210 FAM104AQ969W3 186 aa11.65□□□□□ -0.54
MCF2L-226ENST00000486210 TMEM18Q96B42 140 aa11.65□□□□□ -0.54
MCF2L-226ENST00000486210 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
MCF2L-226ENST00000486210 LRCOL1A6NCL2 159 aa11.64□□□□□ -0.55
MCF2L-226ENST00000486210 ZNF25P17030 456 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-226ENST00000486210 Q0VG73 95 aa11.64□□□□□ -0.55
MCF2L-226ENST00000486210 Q8N814 137 aa11.64□□□□□ -0.55
MCF2L-226ENST00000486210 OR5A1Q8NGJ0 315 aa11.64□□□□□ -0.55
MCF2L-226ENST00000486210 OPRPNQ99935 248 aaPredicted RBP11.64□□□□□ -0.55
MCF2L-226ENST00000486210 CDC42SE2Q9NRR3 84 aa11.64□□□□□ -0.55
MCF2L-226ENST00000486210 TMEM101Q96IK0 257 aa11.63□□□□□ -0.55
MCF2L-226ENST00000486210 TIMM21Q9BVV7 248 aa11.63□□□□□ -0.55
MCF2L-226ENST00000486210 AP5S1Q9NUS5 200 aa11.63□□□□□ -0.55
MCF2L-226ENST00000486210 PRR34Q9NV39 138 aa11.63□□□□□ -0.55
MCF2L-226ENST00000486210 CYSLTR1Q9Y271 337 aa11.63□□□□□ -0.55
MCF2L-226ENST00000486210 FAT3Q8TDW7 4589 aa11.62□□□□□ -0.55
MCF2L-226ENST00000486210 A0A096LNJ9 63 aa11.62□□□□□ -0.55
MCF2L-226ENST00000486210 LINC00310P59036 64 aa11.62□□□□□ -0.55
MCF2L-226ENST00000486210 RAB5BP61020 215 aa11.62□□□□□ -0.55
MCF2L-226ENST00000486210 REG3AQ06141 175 aa11.62□□□□□ -0.55
MCF2L-226ENST00000486210 PMCHL1Q16048 86 aa11.62□□□□□ -0.55
MCF2L-226ENST00000486210 RNASE13Q5GAN3 156 aaKnown RBP11.62□□□□□ -0.55
MCF2L-226ENST00000486210 Q6ZUT4 128 aa11.62□□□□□ -0.55
MCF2L-226ENST00000486210 BAGE3Q86Y29 109 aa11.62□□□□□ -0.55
MCF2L-226ENST00000486210 CSDC2Q9Y534 153 aaKnown RBP11.62□□□□□ -0.55
MCF2L-226ENST00000486210 TRAV8-3A0A0A6YYJ7 113 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 IGKV3OR2-268A0A0C4DH90 116 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BKO60814 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BJP06899 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BOP23527 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BBP33778 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BDP58876 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BCP62807 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST2H2BEQ16778 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.61□□□□□ -0.55
MCF2L-226ENST00000486210 DGAT2L7PQ6IED9 249 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 ZNF664Q8N3J9 261 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BHQ93079 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 TOMM6Q96B49 74 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BNQ99877 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 HIST1H2BMQ99879 126 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 SPANXA1Q9NS26 97 aa11.61□□□□□ -0.55
MCF2L-226ENST00000486210 CRPP02741 224 aa11.6□□□□□ -0.55
MCF2L-226ENST00000486210 PYGO1Q9Y3Y4 419 aa11.6□□□□□ -0.55
MCF2L-226ENST00000486210 IGLV4-3A0A075B6K6 122 aa11.59□□□□□ -0.55
MCF2L-226ENST00000486210 IGIPA6NJ69 53 aa11.59□□□□□ -0.55
MCF2L-226ENST00000486210 NUPR1O60356 82 aa11.59□□□□□ -0.55
MCF2L-226ENST00000486210 SMAGPQ0VAQ4 97 aa11.59□□□□□ -0.55
MCF2L-226ENST00000486210 CHCHD1Q96BP2 118 aaKnown RBP11.59□□□□□ -0.55
MCF2L-226ENST00000486210 SERF1AO75920 110 aa11.58□□□□□ -0.56
MCF2L-226ENST00000486210 MRPS36P82909 103 aaKnown RBP11.58□□□□□ -0.56
MCF2L-226ENST00000486210 ZC2HC1BQ5TFG8 222 aa11.58□□□□□ -0.56
MCF2L-226ENST00000486210 RMI2Q96E14 147 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms