RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 PAX4O43316 350 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 Q8N6K4 173 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 TMEM141Q96I45 108 aa7.98□□□□□ -1.13
CHD3-208ENST00000470531 IGHV3-30-3P0DP02 117 aa7.97□□□□□ -1.13
CHD3-208ENST00000470531 CFAP126Q5VTH2 177 aa7.97□□□□□ -1.13
CHD3-208ENST00000470531 TMEM61Q8N0U2 210 aa7.97□□□□□ -1.13
CHD3-208ENST00000470531 MRPL53Q96EL3 112 aaKnown RBP7.97□□□□□ -1.13
CHD3-208ENST00000470531 TAL2Q16559 108 aa7.96□□□□□ -1.13
CHD3-208ENST00000470531 C4orf26Q17RF5 130 aa7.96□□□□□ -1.13
CHD3-208ENST00000470531 C11orf71Q6IPW1 123 aa7.96□□□□□ -1.13
CHD3-208ENST00000470531 H3BMM0 161 aa7.96□□□□□ -1.14
CHD3-208ENST00000470531 MRAPQ8TCY5 172 aa7.96□□□□□ -1.14
CHD3-208ENST00000470531 UBE2WQ96B02 151 aa7.96□□□□□ -1.14
CHD3-208ENST00000470531 C5orf38Q86SI9 138 aa7.95□□□□□ -1.14
CHD3-208ENST00000470531 LRRC75A-AS1Q8N1F1 130 aa7.95□□□□□ -1.14
CHD3-208ENST00000470531 PIFOQ8TCI5 191 aa7.95□□□□□ -1.14
CHD3-208ENST00000470531 NOP10Q9NPE3 64 aaKnown RBP7.95□□□□□ -1.14
CHD3-208ENST00000470531 hADV29S1A0JD25 119 aa7.95□□□□□ -1.14
CHD3-208ENST00000470531 NBL1P41271 181 aa7.95□□□□□ -1.14
CHD3-208ENST00000470531 WFDC11Q8NEX6 87 aa7.95□□□□□ -1.14
CHD3-208ENST00000470531 DSCR8Q96T75 97 aa7.95□□□□□ -1.14
CHD3-208ENST00000470531 Q9HAA7 133 aa7.95□□□□□ -1.14
CHD3-208ENST00000470531 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
CHD3-208ENST00000470531 CDKN2A-AS1Q9UH64 79 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 TRAV12-1A0A0B4J245 112 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 DEFB4AO15263 64 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 IGHG2P01859 326 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 LINC01620Q4KN68 170 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 GPHB5Q86YW7 130 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 RNF152Q8N8N0 203 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 BRK1Q8WUW1 75 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 CNFNQ9BYD5 112 aa7.94□□□□□ -1.14
CHD3-208ENST00000470531 CELSR2Q9HCU4 2923 aa7.93□□□□□ -1.14
CHD3-208ENST00000470531 A0A0J9YX75 114 aa7.93□□□□□ -1.14
CHD3-208ENST00000470531 C20orf203Q8NBC4 194 aa7.93□□□□□ -1.14
CHD3-208ENST00000470531 ZNF22P17026 224 aaPredicted RBP7.93□□□□□ -1.14
CHD3-208ENST00000470531 EBI3Q14213 229 aa7.93□□□□□ -1.14
CHD3-208ENST00000470531 WFDC10AQ9H1F0 79 aa7.93□□□□□ -1.14
CHD3-208ENST00000470531 IGLV10-54A0A075B6I4 117 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 RPL36AP83881 106 aaKnown RBP7.92□□□□□ -1.14
CHD3-208ENST00000470531 C3orf22Q8N5N4 141 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 C10orf105Q8TEF2 133 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 RPL36ALQ969Q0 106 aaKnown RBP7.92□□□□□ -1.14
CHD3-208ENST00000470531 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 A0A0J9YXY3 114 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 PIK3CD-AS1Q5SR53 167 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 LINC00467Q9BRT7 94 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 UBR5O95071 2799 aaPredicted RBP7.92□□□□□ -1.14
CHD3-208ENST00000470531 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 M0QY20 66 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 TRIAP1O43715 76 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 TSHBP01222 138 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 CRYGDP07320 174 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 HIST1H4AP62805 103 aaKnown RBP7.92□□□□□ -1.14
CHD3-208ENST00000470531 Q96MF0 132 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 LENEPQ9Y5L5 61 aa7.92□□□□□ -1.14
CHD3-208ENST00000470531 FAM236DA0A1B0GTK5 79 aa7.91□□□□□ -1.14
CHD3-208ENST00000470531 FAM236CP0DP71 79 aa7.91□□□□□ -1.14
CHD3-208ENST00000470531 ATP5G1P05496 136 aa7.91□□□□□ -1.14
CHD3-208ENST00000470531 PLA2G2AP14555 144 aa7.91□□□□□ -1.14
CHD3-208ENST00000470531 SLC25A29Q8N8R3 303 aa7.91□□□□□ -1.14
CHD3-208ENST00000470531 UQCRQO14949 82 aa7.91□□□□□ -1.14
CHD3-208ENST00000470531 IGSF10Q6WRI0 2623 aa7.91□□□□□ -1.14
CHD3-208ENST00000470531 TEP1Q99973 2627 aaKnown RBP7.91□□□□□ -1.14
CHD3-208ENST00000470531 LEPROTO15243 131 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 IGHV3-30P01768 117 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 ELANEP08246 267 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 IGHV3-30-5P0DP03 117 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 FBXL19-AS1Q494R0 122 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 C6orf226Q5I0X4 101 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 PEMTQ9UBM1 199 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 ICOSQ9Y6W8 199 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 IGLV4-69A0A075B6H9 119 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 LINC01546A6NGU7 62 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 INSP01308 110 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 XCL1P47992 114 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 LINC01356Q8N9X3 169 aa7.9□□□□□ -1.14
CHD3-208ENST00000470531 C1orf195Q5TG92 126 aa7.9□□□□□ -1.15
CHD3-208ENST00000470531 COX8CQ7Z4L0 72 aa7.9□□□□□ -1.15
CHD3-208ENST00000470531 F8WDY8 70 aa7.89□□□□□ -1.15
CHD3-208ENST00000470531 A6NDX4 124 aa7.89□□□□□ -1.15
CHD3-208ENST00000470531 IGHV3-33P01772 117 aa7.89□□□□□ -1.15
CHD3-208ENST00000470531 POLR2KP53803 58 aaKnown RBP7.89□□□□□ -1.15
CHD3-208ENST00000470531 Q6ZTI0 123 aa7.89□□□□□ -1.15
CHD3-208ENST00000470531 KIR2DL5BQ8NHK3 375 aa7.89□□□□□ -1.15
CHD3-208ENST00000470531 RETNQ9HD89 108 aa7.89□□□□□ -1.15
CHD3-208ENST00000470531 IGIPA6NJ69 53 aa7.89□□□□□ -1.15
CHD3-208ENST00000470531 NBEAL1Q6ZS30 2694 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 VPS13CQ709C8 3753 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 UBE2D1P51668 147 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 ADAMTSL4-AS1Q5T5F5 129 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 PSMG3-AS1Q96PY0 264 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 CRPP02741 224 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 Q6ZSN1 163 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 POM121L12Q8N7R1 296 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 DCANP1Q8TF63 244 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
CHD3-208ENST00000470531 LOC100131303A0A0U1RQF7 123 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms