RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 HERV-K104P63124 156 aa5.78□□□□□ -1.48
SSBP1-208ENST00000469123 SMAGPQ0VAQ4 97 aa5.78□□□□□ -1.48
SSBP1-208ENST00000469123 RNF151Q2KHN1 245 aa5.78□□□□□ -1.48
SSBP1-208ENST00000469123 MRPL54Q6P161 138 aaKnown RBP5.78□□□□□ -1.48
SSBP1-208ENST00000469123 C20orf78Q9BR46 151 aa5.78□□□□□ -1.48
SSBP1-208ENST00000469123 LAMTOR2Q9Y2Q5 125 aa5.78□□□□□ -1.48
SSBP1-208ENST00000469123 TRBV24-1A0A075B6N3 115 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 VCYO14598 125 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 PSCAO43653 123 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 CRPP02741 224 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 PMCHP20382 165 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 CKS2P33552 79 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
SSBP1-208ENST00000469123 MRPL51Q4U2R6 128 aaKnown RBP5.77□□□□□ -1.49
SSBP1-208ENST00000469123 Q6ZRN7 208 aaPredicted RBP5.77□□□□□ -1.49
SSBP1-208ENST00000469123 NTM-AS1Q6ZSK4 140 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 RPL39LQ96EH5 51 aaKnown RBP5.77□□□□□ -1.49
SSBP1-208ENST00000469123 KIR2DL4Q99706 377 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 SIGMAR1Q99720 223 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BLQ99880 126 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 TMEM70Q9BUB7 260 aa5.77□□□□□ -1.49
SSBP1-208ENST00000469123 POLR2KP53803 58 aaKnown RBP5.76□□□□□ -1.49
SSBP1-208ENST00000469123 NDUFA6P56556 154 aa5.76□□□□□ -1.49
SSBP1-208ENST00000469123 ORMDL3Q8N138 153 aa5.76□□□□□ -1.49
SSBP1-208ENST00000469123 A0A1B0GVY2 172 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 C7orf77A4D0Y5 90 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 HLA-DQA1P01909 254 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 ANGP03950 147 aaKnown RBP5.75□□□□□ -1.49
SSBP1-208ENST00000469123 CKS1BP61024 79 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 TNP2Q05952 138 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 MIAQ16674 131 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 MPV17L2Q567V2 206 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 CDPF1Q6NVV7 123 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 NRACQ8N912 160 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 TMEM18Q96B42 140 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 KLK12Q9UKR0 248 aa5.75□□□□□ -1.49
SSBP1-208ENST00000469123 TRAV8-4A0A0B4J246 113 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 D6R8Y8 96 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BKO60814 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 TNFRSF6BO95407 300 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 MT-ND6P03923 174 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BJP06899 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BOP23527 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 FCER1GP30273 86 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BBP33778 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 RPS10P46783 165 aaKnown RBP5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BDP58876 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BCP62807 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST2H2BEQ16778 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.74□□□□□ -1.49
SSBP1-208ENST00000469123 AMMECR1LQ6DCA0 310 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 TMEM136Q6ZRR5 245 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BHQ93079 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 UBE2WQ96B02 151 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BNQ99877 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 HIST1H2BMQ99879 126 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 C1orf43Q9BWL3 253 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 Q9HAA7 133 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 RPS10P5Q9NQ39 176 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 PRR34Q9NV39 138 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
SSBP1-208ENST00000469123 K7EMI3 77 aa5.73□□□□□ -1.49
SSBP1-208ENST00000469123 TSHBP01222 138 aa5.73□□□□□ -1.49
SSBP1-208ENST00000469123 ESDP10768 282 aa5.73□□□□□ -1.49
SSBP1-208ENST00000469123 GAGE6Q13070 117 aa5.73□□□□□ -1.49
SSBP1-208ENST00000469123 TMEM101Q96IK0 257 aa5.73□□□□□ -1.49
SSBP1-208ENST00000469123 PRELID3AQ96N28 172 aa5.73□□□□□ -1.49
SSBP1-208ENST00000469123 SMIM2Q9BVW6 85 aa5.73□□□□□ -1.49
SSBP1-208ENST00000469123 GNB1LQ9BYB4 327 aa5.73□□□□□ -1.49
SSBP1-208ENST00000469123 CSDC2Q9Y534 153 aaKnown RBP5.73□□□□□ -1.49
SSBP1-208ENST00000469123 IGKV2D-24A0A075B6R9 120 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 A0A087WTM6 91 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 SMKR1H3BMG3 65 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 GAS8-AS1O95177 125 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 FABP4P15090 132 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 REG3AQ06141 175 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 C14orf177Q52M58 125 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 Q8N3U1 123 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 Q8N976 141 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 NTN5Q8WTR8 489 aaPredicted RBP5.72□□□□□ -1.49
SSBP1-208ENST00000469123 MAP1LC3AQ9H492 121 aa5.72□□□□□ -1.49
SSBP1-208ENST00000469123 FGF6P10767 208 aa5.71□□□□□ -1.5
SSBP1-208ENST00000469123 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
SSBP1-208ENST00000469123 ENHOQ6UWT2 76 aa5.71□□□□□ -1.5
SSBP1-208ENST00000469123 LINC00269Q8N2A0 174 aa5.71□□□□□ -1.5
SSBP1-208ENST00000469123 C20orf203Q8NBC4 194 aa5.71□□□□□ -1.5
SSBP1-208ENST00000469123 OR5A1Q8NGJ0 315 aa5.71□□□□□ -1.5
SSBP1-208ENST00000469123 TIMM21Q9BVV7 248 aa5.71□□□□□ -1.5
SSBP1-208ENST00000469123 NXT2Q9NPJ8 142 aaKnown RBP5.71□□□□□ -1.5
SSBP1-208ENST00000469123 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.7□□□□□ -1.5
SSBP1-208ENST00000469123 IGKV2-29A2NJV5 120 aaPredicted RBP5.7□□□□□ -1.5
SSBP1-208ENST00000469123 LRCOL1A6NCL2 159 aa5.7□□□□□ -1.5
SSBP1-208ENST00000469123 NPYP01303 97 aa5.7□□□□□ -1.5
SSBP1-208ENST00000469123 DGAT2L7PQ6IED9 249 aa5.7□□□□□ -1.5
SSBP1-208ENST00000469123 TEX43Q6ZNM6 134 aa5.7□□□□□ -1.5
SSBP1-208ENST00000469123 SPATA12Q7Z6I5 190 aa5.7□□□□□ -1.5
SSBP1-208ENST00000469123 BOD1L2Q8IYS8 172 aa5.7□□□□□ -1.5
SSBP1-208ENST00000469123 IGLV4-60A0A075B6I1 120 aa5.69□□□□□ -1.5
SSBP1-208ENST00000469123 LINC01549A6NIU2 74 aa5.69□□□□□ -1.5
SSBP1-208ENST00000469123 C16orf90A8MZG2 172 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms