RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 LINC01620Q4KN68 170 aa14.54□□□□□ -0.08
PDLIM7-206ENST00000463411 SDHAF1A6NFY7 115 aa14.53□□□□□ -0.08
PDLIM7-206ENST00000463411 NPYP01303 97 aa14.53□□□□□ -0.08
PDLIM7-206ENST00000463411 SUMO2P61956 95 aaKnown RBP14.53□□□□□ -0.08
PDLIM7-206ENST00000463411 KIAA1644Q3SXP7 199 aa14.53□□□□□ -0.08
PDLIM7-206ENST00000463411 ALKBH7Q9BT30 221 aaPredicted RBP14.53□□□□□ -0.08
PDLIM7-206ENST00000463411 NTM-AS1Q6ZSK4 140 aa14.52□□□□□ -0.09
PDLIM7-206ENST00000463411 DMBT1Q9UGM3 2413 aaPredicted RBP14.52□□□□□ -0.09
PDLIM7-206ENST00000463411 IGHV1-24A0A0C4DH33 117 aa14.51□□□□□ -0.09
PDLIM7-206ENST00000463411 GAGE6Q13070 117 aa14.51□□□□□ -0.09
PDLIM7-206ENST00000463411 LINC00528Q8N1L1 170 aa14.51□□□□□ -0.09
PDLIM7-206ENST00000463411 TRBV27A0A0K0K1C4 114 aa14.5□□□□□ -0.09
PDLIM7-206ENST00000463411 DNAH8Q96JB1 4490 aa14.49□□□□□ -0.09
PDLIM7-206ENST00000463411 TRGC2P03986 189 aa14.49□□□□□ -0.09
PDLIM7-206ENST00000463411 RBX1P62877 108 aa14.49□□□□□ -0.09
PDLIM7-206ENST00000463411 IQCJQ1A5X6 159 aa14.49□□□□□ -0.09
PDLIM7-206ENST00000463411 SCXQ7RTU7 201 aa14.49□□□□□ -0.09
PDLIM7-206ENST00000463411 SMIM2Q9BVW6 85 aa14.49□□□□□ -0.09
PDLIM7-206ENST00000463411 MAP1LC3AQ9H492 121 aa14.49□□□□□ -0.09
PDLIM7-206ENST00000463411 SRRM2Q9UQ35 2752 aaKnown RBP14.49□□□□□ -0.09
PDLIM7-206ENST00000463411 I3L3M4 83 aa14.48□□□□□ -0.09
PDLIM7-206ENST00000463411 VCYO14598 125 aa14.48□□□□□ -0.09
PDLIM7-206ENST00000463411 CLPSL2Q6UWE3 100 aa14.48□□□□□ -0.09
PDLIM7-206ENST00000463411 USP17L23D6RBM5 183 aa14.47□□□□□ -0.09
PDLIM7-206ENST00000463411 LINC00269Q8N2A0 174 aa14.47□□□□□ -0.09
PDLIM7-206ENST00000463411 PRR34Q9NV39 138 aa14.47□□□□□ -0.09
PDLIM7-206ENST00000463411 TCAPO15273 167 aa14.46□□□□□ -0.09
PDLIM7-206ENST00000463411 CHAC1Q9BUX1 264 aa14.46□□□□□ -0.09
PDLIM7-206ENST00000463411 FLG2Q5D862 2391 aaPredicted RBP14.45□□□□□ -0.1
PDLIM7-206ENST00000463411 PMCHP20382 165 aa14.45□□□□□ -0.1
PDLIM7-206ENST00000463411 COTL1Q14019 142 aa14.45□□□□□ -0.1
PDLIM7-206ENST00000463411 NXT2Q9NPJ8 142 aaKnown RBP14.45□□□□□ -0.1
PDLIM7-206ENST00000463411 K7EMI3 77 aa14.44□□□□□ -0.1
PDLIM7-206ENST00000463411 Q8N8P6 123 aa14.44□□□□□ -0.1
PDLIM7-206ENST00000463411 C18orf32Q8TCD1 76 aa14.44□□□□□ -0.1
PDLIM7-206ENST00000463411 KIR2DL4Q99706 377 aa14.44□□□□□ -0.1
PDLIM7-206ENST00000463411 TMEM243Q9BU79 118 aa14.44□□□□□ -0.1
PDLIM7-206ENST00000463411 REG3AQ06141 175 aa14.43□□□□□ -0.1
PDLIM7-206ENST00000463411 MYCBP2O75592 4640 aa14.42□□□□□ -0.1
PDLIM7-206ENST00000463411 UBE2L6O14933 153 aa14.42□□□□□ -0.1
PDLIM7-206ENST00000463411 TSHBP01222 138 aa14.42□□□□□ -0.1
PDLIM7-206ENST00000463411 LINC01546A6NGU7 62 aa14.41□□□□□ -0.1
PDLIM7-206ENST00000463411 CIRBP-AS1Q8TBR5 109 aa14.41□□□□□ -0.1
PDLIM7-206ENST00000463411 HERC1Q15751 4861 aa14.4□□□□□ -0.1
PDLIM7-206ENST00000463411 LOC389332A0A1B0GUA5 103 aa14.4□□□□□ -0.1
PDLIM7-206ENST00000463411 J3QL48 77 aa14.4□□□□□ -0.1
PDLIM7-206ENST00000463411 DGAT2L7PQ6IED9 249 aa14.4□□□□□ -0.1
PDLIM7-206ENST00000463411 DEFB104AQ8WTQ1 72 aa14.4□□□□□ -0.1
PDLIM7-206ENST00000463411 TRAV8-4A0A0B4J246 113 aa14.39□□□□□ -0.11
PDLIM7-206ENST00000463411 A0A1B0GUV1 79 aa14.39□□□□□ -0.11
PDLIM7-206ENST00000463411 PRSS1P07477 247 aa14.39□□□□□ -0.11
PDLIM7-206ENST00000463411 IFI27P40305 119 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-206ENST00000463411 AMTP48728 403 aa14.39□□□□□ -0.11
PDLIM7-206ENST00000463411 IGLV10-54A0A075B6I4 117 aa14.38□□□□□ -0.11
PDLIM7-206ENST00000463411 ESDP10768 282 aa14.38□□□□□ -0.11
PDLIM7-206ENST00000463411 FCER1GP30273 86 aa14.38□□□□□ -0.11
PDLIM7-206ENST00000463411 C20orf203Q8NBC4 194 aa14.38□□□□□ -0.11
PDLIM7-206ENST00000463411 PRSS3P2Q8NHM4 247 aa14.38□□□□□ -0.11
PDLIM7-206ENST00000463411 RAB5BP61020 215 aa14.37□□□□□ -0.11
PDLIM7-206ENST00000463411 KRTAP26-1Q6PEX3 210 aa14.37□□□□□ -0.11
PDLIM7-206ENST00000463411 H7C423 109 aa14.36□□□□□ -0.11
PDLIM7-206ENST00000463411 ORMDL2Q53FV1 153 aa14.36□□□□□ -0.11
PDLIM7-206ENST00000463411 IGLV4-60A0A075B6I1 120 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 C1orf196B1AJZ1 125 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BKO60814 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BJP06899 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BOP23527 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BBP33778 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BDP58876 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BCP62807 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST2H2BEQ16778 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 C9orf163Q8N9P6 203 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BHQ93079 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BNQ99877 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 HIST1H2BMQ99879 126 aa14.35□□□□□ -0.11
PDLIM7-206ENST00000463411 FA2HQ7L5A8 372 aa14.34□□□□□ -0.11
PDLIM7-206ENST00000463411 URB1-AS1Q96HZ7 61 aa14.34□□□□□ -0.11
PDLIM7-206ENST00000463411 LINC00614P0C842 121 aa14.33□□□□□ -0.12
PDLIM7-206ENST00000463411 AP5S1Q9NUS5 200 aa14.33□□□□□ -0.12
PDLIM7-206ENST00000463411 hDV102S1A0JD36 115 aa14.32□□□□□ -0.12
PDLIM7-206ENST00000463411 G0S2P27469 103 aa14.32□□□□□ -0.12
PDLIM7-206ENST00000463411 TMEM18Q96B42 140 aa14.32□□□□□ -0.12
PDLIM7-206ENST00000463411 CHCHD1Q96BP2 118 aaKnown RBP14.32□□□□□ -0.12
PDLIM7-206ENST00000463411 AMMECR1LQ6DCA0 310 aa14.31□□□□□ -0.12
PDLIM7-206ENST00000463411 LINC01549A6NIU2 74 aa14.3□□□□□ -0.12
PDLIM7-206ENST00000463411 SMAGPQ0VAQ4 97 aa14.3□□□□□ -0.12
PDLIM7-206ENST00000463411 BAGE3Q86Y29 109 aa14.3□□□□□ -0.12
PDLIM7-206ENST00000463411 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-206ENST00000463411 KRTAP29-1A8MX34 341 aaPredicted RBP14.29□□□□□ -0.12
PDLIM7-206ENST00000463411 CNBPP62633 177 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-206ENST00000463411 MRPL52Q86TS9 123 aaKnown RBP14.29□□□□□ -0.12
PDLIM7-206ENST00000463411 TIMM21Q9BVV7 248 aa14.29□□□□□ -0.12
PDLIM7-206ENST00000463411 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-206ENST00000463411 IGKV2-29A2NJV5 120 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-206ENST00000463411 ZNF25P17030 456 aaPredicted RBP14.28□□□□□ -0.12
PDLIM7-206ENST00000463411 RNASEKQ6P5S7 137 aaKnown RBP14.28□□□□□ -0.12
PDLIM7-206ENST00000463411 RPL37AP61513 92 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-206ENST00000463411 COA6Q5JTJ3 125 aaKnown RBP14.27□□□□□ -0.13
PDLIM7-206ENST00000463411 CYSLTR1Q9Y271 337 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms