RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 GAGE12JA6NER3 117 aa11.11□□□□□ -0.63
TOP3A-202ENST00000461127 RPL36AP83881 106 aaKnown RBP11.11□□□□□ -0.63
TOP3A-202ENST00000461127 GAGE1Q13065 139 aa11.11□□□□□ -0.63
TOP3A-202ENST00000461127 GAGE4Q13068 117 aa11.11□□□□□ -0.63
TOP3A-202ENST00000461127 GAGE5Q13069 117 aa11.11□□□□□ -0.63
TOP3A-202ENST00000461127 GAGE13Q4V321 117 aa11.11□□□□□ -0.63
TOP3A-202ENST00000461127 RPL36ALQ969Q0 106 aaKnown RBP11.11□□□□□ -0.63
TOP3A-202ENST00000461127 UBE2WQ96B02 151 aa11.11□□□□□ -0.63
TOP3A-202ENST00000461127 MAP1LC3AQ9H492 121 aa11.11□□□□□ -0.63
TOP3A-202ENST00000461127 KLK12Q9UKR0 248 aa11.11□□□□□ -0.63
TOP3A-202ENST00000461127 NEXN-AS1Q8NBZ9 246 aa11.1□□□□□ -0.63
TOP3A-202ENST00000461127 C20orf78Q9BR46 151 aa11.1□□□□□ -0.63
TOP3A-202ENST00000461127 TRBV6-5A0A0K0K1A5 114 aa11.09□□□□□ -0.63
TOP3A-202ENST00000461127 LOC389332A0A1B0GUA5 103 aa11.09□□□□□ -0.63
TOP3A-202ENST00000461127 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
TOP3A-202ENST00000461127 NIT1Q86X76 327 aa11.09□□□□□ -0.63
TOP3A-202ENST00000461127 A0A087WX48 190 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 SDHAF1A6NFY7 115 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BKO60814 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BJP06899 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 PMCHP20382 165 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BOP23527 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BBP33778 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BDP58876 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BCP62807 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 Q0VG73 95 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST2H2BEQ16778 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 IQCJQ1A5X6 159 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.08□□□□□ -0.64
TOP3A-202ENST00000461127 PRSS3P2Q8NHM4 247 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 C18orf32Q8TCD1 76 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BHQ93079 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BNQ99877 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 HIST1H2BMQ99879 126 aa11.08□□□□□ -0.64
TOP3A-202ENST00000461127 TRBV7-3A0A075B6L6 115 aa11.07□□□□□ -0.64
TOP3A-202ENST00000461127 LINC00694P0DN24 101 aa11.07□□□□□ -0.64
TOP3A-202ENST00000461127 BAGE3Q86Y29 109 aa11.07□□□□□ -0.64
TOP3A-202ENST00000461127 C1orf43Q9BWL3 253 aa11.07□□□□□ -0.64
TOP3A-202ENST00000461127 Q9UF83 564 aa11.07□□□□□ -0.64
TOP3A-202ENST00000461127 VCYO14598 125 aa11.06□□□□□ -0.64
TOP3A-202ENST00000461127 CHCHD7Q9BUK0 85 aa11.06□□□□□ -0.64
TOP3A-202ENST00000461127 SMIM2Q9BVW6 85 aa11.06□□□□□ -0.64
TOP3A-202ENST00000461127 RPL32P62910 135 aaKnown RBP11.05□□□□□ -0.64
TOP3A-202ENST00000461127 DGAT2L7PQ6IED9 249 aa11.05□□□□□ -0.64
TOP3A-202ENST00000461127 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
TOP3A-202ENST00000461127 NXT2Q9NPJ8 142 aaKnown RBP11.05□□□□□ -0.64
TOP3A-202ENST00000461127 PRSS47A8MTI9 375 aa11.04□□□□□ -0.64
TOP3A-202ENST00000461127 I3L3M4 83 aa11.04□□□□□ -0.64
TOP3A-202ENST00000461127 IFI27P40305 119 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-202ENST00000461127 POLR2KP53803 58 aaKnown RBP11.04□□□□□ -0.64
TOP3A-202ENST00000461127 UBE2D3P61077 147 aa11.04□□□□□ -0.64
TOP3A-202ENST00000461127 UBE2D2P62837 147 aa11.04□□□□□ -0.64
TOP3A-202ENST00000461127 Q8N8P6 123 aa11.04□□□□□ -0.64
TOP3A-202ENST00000461127 KIR2DL4Q99706 377 aa11.04□□□□□ -0.64
TOP3A-202ENST00000461127 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.04□□□□□ -0.64
TOP3A-202ENST00000461127 FCER1GP30273 86 aa11.03□□□□□ -0.64
TOP3A-202ENST00000461127 RNASEKQ6P5S7 137 aaKnown RBP11.03□□□□□ -0.64
TOP3A-202ENST00000461127 C9orf163Q8N9P6 203 aa11.03□□□□□ -0.64
TOP3A-202ENST00000461127 TMA7Q9Y2S6 64 aaKnown RBP11.03□□□□□ -0.64
TOP3A-202ENST00000461127 TRBV27A0A0K0K1C4 114 aa11.02□□□□□ -0.65
TOP3A-202ENST00000461127 USP17L23D6RBM5 183 aa11.02□□□□□ -0.65
TOP3A-202ENST00000461127 CRPP02741 224 aa11.02□□□□□ -0.65
TOP3A-202ENST00000461127 NDUFA6P56556 154 aa11.02□□□□□ -0.65
TOP3A-202ENST00000461127 TCAPO15273 167 aa11.01□□□□□ -0.65
TOP3A-202ENST00000461127 S100A6P06703 90 aa11.01□□□□□ -0.65
TOP3A-202ENST00000461127 COTL1Q14019 142 aa11.01□□□□□ -0.65
TOP3A-202ENST00000461127 LINC00614P0C842 121 aa11□□□□□ -0.65
TOP3A-202ENST00000461127 TMEM97Q5BJF2 176 aa11□□□□□ -0.65
TOP3A-202ENST00000461127 CHCHD1Q96BP2 118 aaKnown RBP11□□□□□ -0.65
TOP3A-202ENST00000461127 DPH3Q96FX2 82 aa11□□□□□ -0.65
TOP3A-202ENST00000461127 AP5S1Q9NUS5 200 aa11□□□□□ -0.65
TOP3A-202ENST00000461127 K7EMI3 77 aa10.99□□□□□ -0.65
TOP3A-202ENST00000461127 SERF1AO75920 110 aa10.99□□□□□ -0.65
TOP3A-202ENST00000461127 TSHBP01222 138 aa10.99□□□□□ -0.65
TOP3A-202ENST00000461127 PRSS1P07477 247 aa10.99□□□□□ -0.65
TOP3A-202ENST00000461127 TMEM262E9PQX1 116 aa10.98□□□□□ -0.65
TOP3A-202ENST00000461127 PANO1I0J062 215 aa10.98□□□□□ -0.65
TOP3A-202ENST00000461127 HSBP1O75506 76 aa10.98□□□□□ -0.65
TOP3A-202ENST00000461127 ORMDL2Q53FV1 153 aa10.98□□□□□ -0.65
TOP3A-202ENST00000461127 LINC01600Q96MT4 127 aa10.98□□□□□ -0.65
TOP3A-202ENST00000461127 AMTP48728 403 aa10.97□□□□□ -0.65
TOP3A-202ENST00000461127 SDIM1Q6ZPB5 146 aa10.97□□□□□ -0.65
TOP3A-202ENST00000461127 URB1-AS1Q96HZ7 61 aa10.97□□□□□ -0.65
TOP3A-202ENST00000461127 COA6Q5JTJ3 125 aaKnown RBP10.96□□□□□ -0.65
TOP3A-202ENST00000461127 ENHOQ6UWT2 76 aa10.96□□□□□ -0.65
TOP3A-202ENST00000461127 TRBV25-1A0A075B6N4 114 aa10.95□□□□□ -0.66
TOP3A-202ENST00000461127 IGHV1-24A0A0C4DH33 117 aa10.95□□□□□ -0.66
TOP3A-202ENST00000461127 LINC01546A6NGU7 62 aa10.95□□□□□ -0.66
TOP3A-202ENST00000461127 G0S2P27469 103 aa10.95□□□□□ -0.66
TOP3A-202ENST00000461127 TRBV6-8A0A0A6YYG3 113 aa10.94□□□□□ -0.66
TOP3A-202ENST00000461127 ANGP03950 147 aaKnown RBP10.94□□□□□ -0.66
TOP3A-202ENST00000461127 LINC00310P59036 64 aa10.94□□□□□ -0.66
TOP3A-202ENST00000461127 CIRBPQ14011 172 aaKnown RBP10.94□□□□□ -0.66
TOP3A-202ENST00000461127 MIAQ16674 131 aa10.94□□□□□ -0.66
TOP3A-202ENST00000461127 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
TOP3A-202ENST00000461127 C7orf33Q8WU49 177 aa10.94□□□□□ -0.66
TOP3A-202ENST00000461127 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
TOP3A-202ENST00000461127 PMCHL1Q16048 86 aa10.93□□□□□ -0.66
TOP3A-202ENST00000461127 TMEM18Q96B42 140 aa10.93□□□□□ -0.66
TOP3A-202ENST00000461127 UBE2L6O14933 153 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms