RNA–Protein interactions for RNA: ENST00000457416.6

FGFR2-215, Transcript of fibroblast growth factor receptor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FGFR2, Length 3,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-215ENST00000457416 IGHV3-33P01772 117 aa12.31□□□□□ -0.44
FGFR2-215ENST00000457416 TMEM223A0PJW6 202 aa12.3□□□□□ -0.44
FGFR2-215ENST00000457416 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
FGFR2-215ENST00000457416 TMEM61Q8N0U2 210 aa12.3□□□□□ -0.44
FGFR2-215ENST00000457416 VWFP04275 2813 aa12.29□□□□□ -0.44
FGFR2-215ENST00000457416 NHLRC4P0CG21 123 aaPredicted RBP12.29□□□□□ -0.44
FGFR2-215ENST00000457416 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
FGFR2-215ENST00000457416 CDKN2A-AS1Q9UH64 79 aa12.29□□□□□ -0.44
FGFR2-215ENST00000457416 GAGE5Q13069 117 aa12.29□□□□□ -0.44
FGFR2-215ENST00000457416 GAGE6Q13070 117 aa12.29□□□□□ -0.44
FGFR2-215ENST00000457416 TOMM7Q9P0U1 55 aa12.29□□□□□ -0.44
FGFR2-215ENST00000457416 FASNP49327 2511 aaKnown RBP12.28□□□□□ -0.44
FGFR2-215ENST00000457416 RNF152Q8N8N0 203 aa12.28□□□□□ -0.44
FGFR2-215ENST00000457416 C2orf82Q6UX34 121 aa12.27□□□□□ -0.44
FGFR2-215ENST00000457416 WFDC10AQ9H1F0 79 aa12.27□□□□□ -0.44
FGFR2-215ENST00000457416 TRGV1A0A0A0MS02 117 aa12.27□□□□□ -0.45
FGFR2-215ENST00000457416 KRTAP10-9P60411 292 aa12.27□□□□□ -0.45
FGFR2-215ENST00000457416 RBMY1BA6NDE4 496 aaKnown RBP12.26□□□□□ -0.45
FGFR2-215ENST00000457416 RBMY1EA6NEQ0 496 aaKnown RBP12.26□□□□□ -0.45
FGFR2-215ENST00000457416 RBMY1DP0C7P1 496 aaKnown RBP12.26□□□□□ -0.45
FGFR2-215ENST00000457416 RHOHQ15669 191 aa12.26□□□□□ -0.45
FGFR2-215ENST00000457416 HIST2H2BCQ6DN03 193 aa12.26□□□□□ -0.45
FGFR2-215ENST00000457416 DYNLRB2Q8TF09 96 aa12.26□□□□□ -0.45
FGFR2-215ENST00000457416 TMEM263Q8WUH6 116 aaKnown RBP12.26□□□□□ -0.45
FGFR2-215ENST00000457416 RPL13AP40429 203 aaKnown RBP12.26□□□□□ -0.45
FGFR2-215ENST00000457416 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.26□□□□□ -0.45
FGFR2-215ENST00000457416 LEPROTO15243 131 aa12.25□□□□□ -0.45
FGFR2-215ENST00000457416 NSUN5P1Q3KNT7 163 aa12.25□□□□□ -0.45
FGFR2-215ENST00000457416 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
FGFR2-215ENST00000457416 LINC01620Q4KN68 170 aa12.25□□□□□ -0.45
FGFR2-215ENST00000457416 BBC3Q96PG8 261 aaPredicted RBP12.25□□□□□ -0.45
FGFR2-215ENST00000457416 CHCHD5Q9BSY4 110 aa12.25□□□□□ -0.45
FGFR2-215ENST00000457416 COX6A2Q02221 97 aa12.24□□□□□ -0.45
FGFR2-215ENST00000457416 LYRM7Q5U5X0 104 aa12.24□□□□□ -0.45
FGFR2-215ENST00000457416 NDUFV3P56181 108 aaKnown RBP12.24□□□□□ -0.45
FGFR2-215ENST00000457416 DEFB113Q30KQ7 82 aa12.24□□□□□ -0.45
FGFR2-215ENST00000457416 MEIG1Q5JSS6 88 aa12.24□□□□□ -0.45
FGFR2-215ENST00000457416 M0R2P5 195 aa12.24□□□□□ -0.45
FGFR2-215ENST00000457416 LINC00694P0DN24 101 aa12.24□□□□□ -0.45
FGFR2-215ENST00000457416 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
FGFR2-215ENST00000457416 GAGE4Q13068 117 aa12.23□□□□□ -0.45
FGFR2-215ENST00000457416 PEMTQ9UBM1 199 aa12.23□□□□□ -0.45
FGFR2-215ENST00000457416 CR1P17927 2039 aa12.23□□□□□ -0.45
FGFR2-215ENST00000457416 H3BMM0 161 aa12.22□□□□□ -0.45
FGFR2-215ENST00000457416 Q9H8V8 135 aa12.22□□□□□ -0.45
FGFR2-215ENST00000457416 PIK3CD-AS1Q5SR53 167 aa12.22□□□□□ -0.45
FGFR2-215ENST00000457416 Q96MF0 132 aa12.22□□□□□ -0.45
FGFR2-215ENST00000457416 Q8N2B8 174 aa12.21□□□□□ -0.45
FGFR2-215ENST00000457416 PDZD2O15018 2839 aa12.21□□□□□ -0.46
FGFR2-215ENST00000457416 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
FGFR2-215ENST00000457416 ICOSQ9Y6W8 199 aa12.2□□□□□ -0.46
FGFR2-215ENST00000457416 ATRQ13535 2644 aa12.2□□□□□ -0.46
FGFR2-215ENST00000457416 TRAV8-4A0A0B4J246 113 aa12.2□□□□□ -0.46
FGFR2-215ENST00000457416 GAGE7O76087 117 aa12.2□□□□□ -0.46
FGFR2-215ENST00000457416 GAGE12FP0CL80 117 aa12.2□□□□□ -0.46
FGFR2-215ENST00000457416 GAGE12GP0CL81 117 aa12.2□□□□□ -0.46
FGFR2-215ENST00000457416 GAGE12IP0CL82 117 aa12.2□□□□□ -0.46
FGFR2-215ENST00000457416 RPL35AP18077 110 aaKnown RBP12.2□□□□□ -0.46
FGFR2-215ENST00000457416 ZNF843Q8N446 348 aa12.2□□□□□ -0.46
FGFR2-215ENST00000457416 LOC100131303A0A0U1RQF7 123 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 ATP6V0E2Q8NHE4 81 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 C4orf3Q8WVX3 66 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 A0A096LPF7 62 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 IFITM1P13164 125 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 CLPSL2Q6UWE3 100 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 FAM104AQ969W3 186 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 Q9HAA7 133 aa12.19□□□□□ -0.46
FGFR2-215ENST00000457416 LRRC75A-AS1Q8N1F1 130 aa12.18□□□□□ -0.46
FGFR2-215ENST00000457416 A8MTW9 85 aa12.17□□□□□ -0.46
FGFR2-215ENST00000457416 Q6ZTI0 123 aa12.17□□□□□ -0.46
FGFR2-215ENST00000457416 UBE2WQ96B02 151 aa12.17□□□□□ -0.46
FGFR2-215ENST00000457416 ZNF415Q09FC8 603 aa12.17□□□□□ -0.46
FGFR2-215ENST00000457416 TEP1Q99973 2627 aaKnown RBP12.17□□□□□ -0.46
FGFR2-215ENST00000457416 MAP6D1Q9H9H5 199 aa12.17□□□□□ -0.46
FGFR2-215ENST00000457416 PRIMA1Q86XR5 153 aa12.16□□□□□ -0.46
FGFR2-215ENST00000457416 H7C423 109 aa12.16□□□□□ -0.46
FGFR2-215ENST00000457416 EDA2RQ9HAV5 297 aa12.16□□□□□ -0.46
FGFR2-215ENST00000457416 IGHV1-58A0A0C4DH39 117 aa12.15□□□□□ -0.46
FGFR2-215ENST00000457416 CITED1Q99966 193 aa12.15□□□□□ -0.46
FGFR2-215ENST00000457416 DEFB114Q30KQ6 69 aa12.14□□□□□ -0.47
FGFR2-215ENST00000457416 VSIG2Q96IQ7 327 aa12.14□□□□□ -0.47
FGFR2-215ENST00000457416 CHCHD7Q9BUK0 85 aa12.14□□□□□ -0.47
FGFR2-215ENST00000457416 TMEM262E9PQX1 116 aa12.14□□□□□ -0.47
FGFR2-215ENST00000457416 NOP10Q9NPE3 64 aaKnown RBP12.14□□□□□ -0.47
FGFR2-215ENST00000457416 UBE2D4Q9Y2X8 147 aa12.14□□□□□ -0.47
FGFR2-215ENST00000457416 TMEM101Q96IK0 257 aa12.14□□□□□ -0.47
FGFR2-215ENST00000457416 LITAFQ99732 161 aa12.14□□□□□ -0.47
FGFR2-215ENST00000457416 UNC79Q9P2D8 2635 aa12.13□□□□□ -0.47
FGFR2-215ENST00000457416 HIVEP1P15822 2718 aa12.13□□□□□ -0.47
FGFR2-215ENST00000457416 PFN2P35080 140 aa12.13□□□□□ -0.47
FGFR2-215ENST00000457416 MRPL23Q16540 153 aaKnown RBP12.13□□□□□ -0.47
FGFR2-215ENST00000457416 COX6CP09669 75 aa12.13□□□□□ -0.47
FGFR2-215ENST00000457416 ESM1Q9NQ30 184 aa12.13□□□□□ -0.47
FGFR2-215ENST00000457416 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
FGFR2-215ENST00000457416 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
FGFR2-215ENST00000457416 INSP01308 110 aa12.11□□□□□ -0.47
FGFR2-215ENST00000457416 TRGV2A0A075B6R0 118 aa12.11□□□□□ -0.47
FGFR2-215ENST00000457416 RNASE1P07998 156 aaKnown RBP12.11□□□□□ -0.47
FGFR2-215ENST00000457416 KLK5Q9Y337 293 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms