RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 C9orf170A2RU37 121 aa4.61□□□□□ -1.67
RPE-209ENST00000438191 NCR2O95944 276 aa4.61□□□□□ -1.67
RPE-209ENST00000438191 RPL37P61927 97 aaKnown RBP4.61□□□□□ -1.67
RPE-209ENST00000438191 LRRC37A5PQ49AS3 106 aa4.61□□□□□ -1.67
RPE-209ENST00000438191 MZT2AQ6P582 158 aa4.61□□□□□ -1.67
RPE-209ENST00000438191 LYZL1Q6UWQ5 148 aa4.61□□□□□ -1.67
RPE-209ENST00000438191 COX8CQ7Z4L0 72 aa4.61□□□□□ -1.67
RPE-209ENST00000438191 LINC00167Q96N53 147 aa4.61□□□□□ -1.67
RPE-209ENST00000438191 LSM5Q9Y4Y9 91 aaKnown RBP4.61□□□□□ -1.67
RPE-209ENST00000438191 CTDSP2O14595 271 aa4.6□□□□□ -1.67
RPE-209ENST00000438191 APCSP02743 223 aa4.6□□□□□ -1.67
RPE-209ENST00000438191 UBE2G2P60604 165 aa4.6□□□□□ -1.67
RPE-209ENST00000438191 RPS20P60866 119 aaKnown RBP4.6□□□□□ -1.67
RPE-209ENST00000438191 SUMO1P63165 101 aaKnown RBP4.6□□□□□ -1.67
RPE-209ENST00000438191 PRLHP81277 87 aa4.6□□□□□ -1.67
RPE-209ENST00000438191 Q86TA4 180 aa4.6□□□□□ -1.67
RPE-209ENST00000438191 MCFD2Q8NI22 146 aa4.6□□□□□ -1.67
RPE-209ENST00000438191 CNBD2Q96M20 576 aa4.6□□□□□ -1.67
RPE-209ENST00000438191 SPRR2EP22531 72 aa4.59□□□□□ -1.67
RPE-209ENST00000438191 SPRR2BP35325 72 aa4.59□□□□□ -1.67
RPE-209ENST00000438191 SPRR2AP35326 72 aa4.59□□□□□ -1.67
RPE-209ENST00000438191 STX12Q86Y82 276 aa4.59□□□□□ -1.67
RPE-209ENST00000438191 TRBV30A0A0K0K1B3 111 aa4.58□□□□□ -1.68
RPE-209ENST00000438191 CXCL1P09341 107 aa4.58□□□□□ -1.68
RPE-209ENST00000438191 SPRR4Q96PI1 79 aa4.58□□□□□ -1.68
RPE-209ENST00000438191 WDR61Q9GZS3 305 aaKnown RBP4.58□□□□□ -1.68
RPE-209ENST00000438191 C20orf202A1L168 122 aa4.57□□□□□ -1.68
RPE-209ENST00000438191 C17orf112F2Z3M2 114 aa4.57□□□□□ -1.68
RPE-209ENST00000438191 PNRC1Q12796 327 aaPredicted RBP4.57□□□□□ -1.68
RPE-209ENST00000438191 LINC00469Q8N7U9 141 aa4.57□□□□□ -1.68
RPE-209ENST00000438191 XAGE1AQ9HD64 81 aa4.57□□□□□ -1.68
RPE-209ENST00000438191 HMGB3O15347 200 aaKnown RBP4.56□□□□□ -1.68
RPE-209ENST00000438191 UPK1BO75841 260 aa4.56□□□□□ -1.68
RPE-209ENST00000438191 IGLV6-57P01721 117 aa4.56□□□□□ -1.68
RPE-209ENST00000438191 NEDD8Q15843 81 aa4.56□□□□□ -1.68
RPE-209ENST00000438191 MRPL52Q86TS9 123 aaKnown RBP4.56□□□□□ -1.68
RPE-209ENST00000438191 RBM38Q9H0Z9 239 aaKnown RBP4.56□□□□□ -1.68
RPE-209ENST00000438191 GAGE10A6NGK3 116 aa4.55□□□□□ -1.68
RPE-209ENST00000438191 ZNF727A8MUV8 499 aa4.55□□□□□ -1.68
RPE-209ENST00000438191 PVALBP20472 110 aaPredicted RBP4.55□□□□□ -1.68
RPE-209ENST00000438191 NCS1P62166 190 aa4.55□□□□□ -1.68
RPE-209ENST00000438191 NHLH2Q02577 135 aa4.55□□□□□ -1.68
RPE-209ENST00000438191 KIAA0087Q14695 138 aa4.55□□□□□ -1.68
RPE-209ENST00000438191 ZFP30Q9Y2G7 519 aa4.55□□□□□ -1.68
RPE-209ENST00000438191 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
RPE-209ENST00000438191 ARL14EPLP0DKL9 152 aa4.54□□□□□ -1.68
RPE-209ENST00000438191 FOXA3P55318 350 aaPredicted RBP4.54□□□□□ -1.68
RPE-209ENST00000438191 C2orf82Q6UX34 121 aa4.54□□□□□ -1.68
RPE-209ENST00000438191 FAM19A1Q7Z5A9 133 aa4.54□□□□□ -1.68
RPE-209ENST00000438191 GNB1LQ9BYB4 327 aa4.54□□□□□ -1.68
RPE-209ENST00000438191 A0A1W2PPV4 95 aa4.53□□□□□ -1.68
RPE-209ENST00000438191 RNASE13Q5GAN3 156 aaKnown RBP4.53□□□□□ -1.68
RPE-209ENST00000438191 FAUP35544 74 aaKnown RBP4.52□□□□□ -1.69
RPE-209ENST00000438191 VBP1P61758 197 aa4.52□□□□□ -1.69
RPE-209ENST00000438191 RPL32P62910 135 aaKnown RBP4.52□□□□□ -1.69
RPE-209ENST00000438191 CBLN2Q8IUK8 224 aa4.52□□□□□ -1.69
RPE-209ENST00000438191 CCDC32Q9BV29 185 aa4.52□□□□□ -1.69
RPE-209ENST00000438191 IGHV3OR16-9A0A0B4J2B5 98 aa4.51□□□□□ -1.69
RPE-209ENST00000438191 A6NN06 94 aa4.51□□□□□ -1.69
RPE-209ENST00000438191 PEX7O00628 323 aa4.51□□□□□ -1.69
RPE-209ENST00000438191 GCHFRP30047 84 aa4.51□□□□□ -1.69
RPE-209ENST00000438191 MRAP2Q96G30 205 aa4.51□□□□□ -1.69
RPE-209ENST00000438191 STAG3L2P0CL84 134 aa4.5□□□□□ -1.69
RPE-209ENST00000438191 STAG3L3P0CL85 134 aa4.5□□□□□ -1.69
RPE-209ENST00000438191 GATD1Q8NB37 220 aa4.5□□□□□ -1.69
RPE-209ENST00000438191 RPL39LQ96EH5 51 aaKnown RBP4.5□□□□□ -1.69
RPE-209ENST00000438191 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
RPE-209ENST00000438191 GEMIN7Q9H840 131 aaKnown RBP4.5□□□□□ -1.69
RPE-209ENST00000438191 IGKV2-28A0A075B6P5 120 aa4.49□□□□□ -1.69
RPE-209ENST00000438191 SDHAF1A6NFY7 115 aa4.49□□□□□ -1.69
RPE-209ENST00000438191 IGKV2D-28P01615 120 aa4.49□□□□□ -1.69
RPE-209ENST00000438191 SSBP3-AS1Q7Z2R9 100 aa4.49□□□□□ -1.69
RPE-209ENST00000438191 HIGD2AQ9BW72 106 aa4.49□□□□□ -1.69
RPE-209ENST00000438191 RGS5O15539 181 aa4.48□□□□□ -1.69
RPE-209ENST00000438191 PMCHP20382 165 aa4.48□□□□□ -1.69
RPE-209ENST00000438191 RAB32Q13637 225 aa4.48□□□□□ -1.69
RPE-209ENST00000438191 MOBPQ13875 183 aa4.48□□□□□ -1.69
RPE-209ENST00000438191 TMEM126AQ9H061 195 aa4.48□□□□□ -1.69
RPE-209ENST00000438191 ZNF706Q9Y5V0 76 aaPredicted RBP4.48□□□□□ -1.69
RPE-209ENST00000438191 IGLV5-37A0A075B6J1 123 aa4.47□□□□□ -1.69
RPE-209ENST00000438191 A0A1W2PRE2 83 aa4.47□□□□□ -1.69
RPE-209ENST00000438191 I3L3M4 83 aa4.47□□□□□ -1.69
RPE-209ENST00000438191 LTAP01374 205 aa4.47□□□□□ -1.69
RPE-209ENST00000438191 MZT2BQ6NZ67 158 aa4.47□□□□□ -1.69
RPE-209ENST00000438191 LINC01551Q86U37 167 aa4.47□□□□□ -1.69
RPE-209ENST00000438191 CSDC2Q9Y534 153 aaKnown RBP4.47□□□□□ -1.69
RPE-209ENST00000438191 FAM25EA8MYX2 175 aa4.46□□□□□ -1.7
RPE-209ENST00000438191 TMEM238C9JI98 176 aa4.46□□□□□ -1.7
RPE-209ENST00000438191 UBE2G1P62253 170 aa4.46□□□□□ -1.7
RPE-209ENST00000438191 IL15RAQ13261 267 aa4.46□□□□□ -1.7
RPE-209ENST00000438191 HIST1H2BAQ96A08 127 aa4.46□□□□□ -1.7
RPE-209ENST00000438191 FMC1Q96HJ9 113 aa4.46□□□□□ -1.7
RPE-209ENST00000438191 TMEM167BQ9NRX6 74 aa4.46□□□□□ -1.7
RPE-209ENST00000438191 TMEM242Q9NWH2 141 aa4.46□□□□□ -1.7
RPE-209ENST00000438191 M0R378 163 aa4.45□□□□□ -1.7
RPE-209ENST00000438191 NDUFB6O95139 128 aa4.45□□□□□ -1.7
RPE-209ENST00000438191 TRGC1P0CF51 173 aa4.45□□□□□ -1.7
RPE-209ENST00000438191 IGLC6P0CF74 106 aa4.45□□□□□ -1.7
RPE-209ENST00000438191 SPRR2DP22532 72 aa4.45□□□□□ -1.7
RPE-209ENST00000438191 CDC34P49427 236 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms