RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 TIMM17AQ99595 171 aa8.37□□□□□ -1.07
CLDN4-202ENST00000431918 CHCHD5Q9BSY4 110 aa8.37□□□□□ -1.07
CLDN4-202ENST00000431918 CFAP126Q5VTH2 177 aa8.36□□□□□ -1.07
CLDN4-202ENST00000431918 Q6ZTI0 123 aa8.36□□□□□ -1.07
CLDN4-202ENST00000431918 NF1P21359 2839 aa8.36□□□□□ -1.07
CLDN4-202ENST00000431918 RBMY1BA6NDE4 496 aaKnown RBP8.36□□□□□ -1.07
CLDN4-202ENST00000431918 RBMY1EA6NEQ0 496 aaKnown RBP8.36□□□□□ -1.07
CLDN4-202ENST00000431918 RBMY1DP0C7P1 496 aaKnown RBP8.36□□□□□ -1.07
CLDN4-202ENST00000431918 ODF3L2Q3SX64 289 aa8.36□□□□□ -1.07
CLDN4-202ENST00000431918 TMEM101Q96IK0 257 aa8.36□□□□□ -1.07
CLDN4-202ENST00000431918 KIF25-AS1Q9Y6Z4 181 aa8.36□□□□□ -1.07
CLDN4-202ENST00000431918 TRBV27A0A0K0K1C4 114 aa8.36□□□□□ -1.07
CLDN4-202ENST00000431918 TAL2Q16559 108 aa8.36□□□□□ -1.07
CLDN4-202ENST00000431918 PLA2G2AP14555 144 aa8.35□□□□□ -1.07
CLDN4-202ENST00000431918 TRAV8-3A0A0A6YYJ7 113 aa8.35□□□□□ -1.07
CLDN4-202ENST00000431918 LINC00315P59091 139 aa8.35□□□□□ -1.07
CLDN4-202ENST00000431918 CSDC2Q9Y534 153 aaKnown RBP8.35□□□□□ -1.07
CLDN4-202ENST00000431918 ZMAT4Q9H898 229 aa8.35□□□□□ -1.07
CLDN4-202ENST00000431918 TSHBP01222 138 aa8.34□□□□□ -1.07
CLDN4-202ENST00000431918 RPL13AP40429 203 aaKnown RBP8.34□□□□□ -1.07
CLDN4-202ENST00000431918 A0A096LPF7 62 aa8.34□□□□□ -1.07
CLDN4-202ENST00000431918 SLC25A20O43772 301 aa8.34□□□□□ -1.07
CLDN4-202ENST00000431918 FSHBP01225 129 aa8.34□□□□□ -1.07
CLDN4-202ENST00000431918 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.07
CLDN4-202ENST00000431918 A4D1N5 150 aa8.34□□□□□ -1.07
CLDN4-202ENST00000431918 PRO0461Q9UI25 63 aa8.34□□□□□ -1.07
CLDN4-202ENST00000431918 FBN2P35556 2912 aa8.34□□□□□ -1.08
CLDN4-202ENST00000431918 CMC4P56277 68 aaPredicted RBP8.33□□□□□ -1.08
CLDN4-202ENST00000431918 CIRBPQ14011 172 aaKnown RBP8.33□□□□□ -1.08
CLDN4-202ENST00000431918 Q9UF83 564 aa8.33□□□□□ -1.08
CLDN4-202ENST00000431918 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
CLDN4-202ENST00000431918 ATRQ13535 2644 aa8.33□□□□□ -1.08
CLDN4-202ENST00000431918 FHL3Q13643 280 aa8.33□□□□□ -1.08
CLDN4-202ENST00000431918 APCP25054 2843 aa8.33□□□□□ -1.08
CLDN4-202ENST00000431918 UNC79Q9P2D8 2635 aa8.33□□□□□ -1.08
CLDN4-202ENST00000431918 IGIPA6NJ69 53 aa8.33□□□□□ -1.08
CLDN4-202ENST00000431918 IGLV4-3A0A075B6K6 122 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 TRBV6-5A0A0K0K1A5 114 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 SMIM9A6NGZ8 99 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 NXPH4O95158 308 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 NHLRC4P0CG21 123 aaPredicted RBP8.32□□□□□ -1.08
CLDN4-202ENST00000431918 CR1P17927 2039 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 LINC00694P0DN24 101 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 LINC00467Q9BRT7 94 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 MXRA5Q9NR99 2828 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 CARD19Q96LW7 228 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 F8P00451 2351 aa8.32□□□□□ -1.08
CLDN4-202ENST00000431918 LOC107984640A0A0U1RRK4 108 aa8.31□□□□□ -1.08
CLDN4-202ENST00000431918 Q6ZSN1 163 aa8.31□□□□□ -1.08
CLDN4-202ENST00000431918 C11orf68Q9H3H3 251 aaKnown RBP8.31□□□□□ -1.08
CLDN4-202ENST00000431918 RNF152Q8N8N0 203 aa8.31□□□□□ -1.08
CLDN4-202ENST00000431918 EDA2RQ9HAV5 297 aa8.31□□□□□ -1.08
CLDN4-202ENST00000431918 INAFM1C9JVW0 142 aa8.31□□□□□ -1.08
CLDN4-202ENST00000431918 J3KT08 172 aa8.31□□□□□ -1.08
CLDN4-202ENST00000431918 A8MZ25 164 aa8.31□□□□□ -1.08
CLDN4-202ENST00000431918 DEFB4AO15263 64 aa8.31□□□□□ -1.08
CLDN4-202ENST00000431918 TRBV7-3A0A075B6L6 115 aa8.3□□□□□ -1.08
CLDN4-202ENST00000431918 CRLF1O75462 422 aa8.3□□□□□ -1.08
CLDN4-202ENST00000431918 TCL1BO95988 128 aa8.3□□□□□ -1.08
CLDN4-202ENST00000431918 SMCPP49901 116 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-202ENST00000431918 MORN3Q6PF18 240 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-202ENST00000431918 DAND5Q8N907 189 aa8.3□□□□□ -1.08
CLDN4-202ENST00000431918 LINC01546A6NGU7 62 aa8.3□□□□□ -1.08
CLDN4-202ENST00000431918 ZNF22P17026 224 aaPredicted RBP8.3□□□□□ -1.08
CLDN4-202ENST00000431918 GCN1Q92616 2671 aaKnown RBP8.29□□□□□ -1.08
CLDN4-202ENST00000431918 K7EQD1 137 aa8.29□□□□□ -1.08
CLDN4-202ENST00000431918 LEPROTO15243 131 aa8.29□□□□□ -1.08
CLDN4-202ENST00000431918 RNASE1P07998 156 aaKnown RBP8.29□□□□□ -1.08
CLDN4-202ENST00000431918 PRIMA1Q86XR5 153 aa8.29□□□□□ -1.08
CLDN4-202ENST00000431918 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
CLDN4-202ENST00000431918 IGHV3-30-3P0DP02 117 aa8.29□□□□□ -1.08
CLDN4-202ENST00000431918 Q8N2B8 174 aa8.29□□□□□ -1.08
CLDN4-202ENST00000431918 TMEM263Q8WUH6 116 aaKnown RBP8.29□□□□□ -1.08
CLDN4-202ENST00000431918 TMEM243Q9BU79 118 aa8.29□□□□□ -1.08
CLDN4-202ENST00000431918 LY6G6DO95868 133 aa8.28□□□□□ -1.08
CLDN4-202ENST00000431918 COX6CP09669 75 aa8.28□□□□□ -1.08
CLDN4-202ENST00000431918 DNAJC30Q96LL9 226 aa8.28□□□□□ -1.08
CLDN4-202ENST00000431918 SETXQ7Z333 2677 aaKnown RBP8.28□□□□□ -1.08
CLDN4-202ENST00000431918 MUSTN1Q8IVN3 82 aa8.28□□□□□ -1.08
CLDN4-202ENST00000431918 C1orf158Q8N1D5 194 aa8.28□□□□□ -1.08
CLDN4-202ENST00000431918 CLPSL2Q6UWE3 100 aa8.28□□□□□ -1.08
CLDN4-202ENST00000431918 A0A0J9YY99 117 aa8.27□□□□□ -1.08
CLDN4-202ENST00000431918 FAM236AA0A1B0GUQ0 79 aa8.27□□□□□ -1.08
CLDN4-202ENST00000431918 FAM236BA0A1B0GV22 79 aa8.27□□□□□ -1.08
CLDN4-202ENST00000431918 TSPEAR-AS2P59090 65 aa8.27□□□□□ -1.08
CLDN4-202ENST00000431918 GAGE2AQ6NT46 116 aa8.27□□□□□ -1.08
CLDN4-202ENST00000431918 PRO1854Q9UHT4 67 aa8.27□□□□□ -1.08
CLDN4-202ENST00000431918 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.09
CLDN4-202ENST00000431918 SLC25A29Q8N8R3 303 aa8.27□□□□□ -1.09
CLDN4-202ENST00000431918 FAM19A5Q7Z5A7 132 aaPredicted RBP8.27□□□□□ -1.09
CLDN4-202ENST00000431918 LINC00482Q8N8I6 264 aa8.27□□□□□ -1.09
CLDN4-202ENST00000431918 C16orf74Q96GX8 76 aa8.27□□□□□ -1.09
CLDN4-202ENST00000431918 LOC100131303A0A0U1RQF7 123 aa8.26□□□□□ -1.09
CLDN4-202ENST00000431918 HILS1P60008 231 aa8.26□□□□□ -1.09
CLDN4-202ENST00000431918 CDKN2A-AS1Q9UH64 79 aa8.26□□□□□ -1.09
CLDN4-202ENST00000431918 CSMD2Q7Z408 3487 aa8.26□□□□□ -1.09
CLDN4-202ENST00000431918 C2orf82Q6UX34 121 aa8.26□□□□□ -1.09
CLDN4-202ENST00000431918 UBE2WQ96B02 151 aa8.26□□□□□ -1.09
CLDN4-202ENST00000431918 Q9H8V8 135 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms