RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
DDX56-202ENST00000415758 PMCHP20382 165 aa9.4□□□□□ -0.9
DDX56-202ENST00000415758 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
DDX56-202ENST00000415758 GAGE2BQ13066 116 aa9.4□□□□□ -0.9
DDX56-202ENST00000415758 SMIM15Q7Z3B0 74 aa9.4□□□□□ -0.9
DDX56-202ENST00000415758 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.9
DDX56-202ENST00000415758 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
DDX56-202ENST00000415758 IGLV4-69A0A075B6H9 119 aa9.39□□□□□ -0.91
DDX56-202ENST00000415758 TEX46H3BTG2 121 aa9.39□□□□□ -0.91
DDX56-202ENST00000415758 EIF5AL1Q6IS14 154 aaKnown RBP9.39□□□□□ -0.91
DDX56-202ENST00000415758 NUP35Q8NFH5 326 aa9.39□□□□□ -0.91
DDX56-202ENST00000415758 BATF3Q9NR55 127 aa9.39□□□□□ -0.91
DDX56-202ENST00000415758 TSHBP01222 138 aa9.38□□□□□ -0.91
DDX56-202ENST00000415758 C9orf116Q5BN46 136 aaPredicted RBP9.38□□□□□ -0.91
DDX56-202ENST00000415758 MRAP2Q96G30 205 aa9.38□□□□□ -0.91
DDX56-202ENST00000415758 RNASE7Q9H1E1 156 aaKnown RBP9.38□□□□□ -0.91
DDX56-202ENST00000415758 MUC2Q02817 5179 aa9.37□□□□□ -0.91
DDX56-202ENST00000415758 APOMO95445 188 aa9.37□□□□□ -0.91
DDX56-202ENST00000415758 MT-ND6P03923 174 aa9.37□□□□□ -0.91
DDX56-202ENST00000415758 C1orf196B1AJZ1 125 aa9.36□□□□□ -0.91
DDX56-202ENST00000415758 K7EN84 100 aa9.36□□□□□ -0.91
DDX56-202ENST00000415758 BCL2P10415 239 aa9.36□□□□□ -0.91
DDX56-202ENST00000415758 OCC1Q8TAD7 63 aa9.36□□□□□ -0.91
DDX56-202ENST00000415758 TRBV27A0A0K0K1C4 114 aa9.35□□□□□ -0.91
DDX56-202ENST00000415758 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.35□□□□□ -0.91
DDX56-202ENST00000415758 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
DDX56-202ENST00000415758 RGS21Q2M5E4 152 aa9.35□□□□□ -0.91
DDX56-202ENST00000415758 C1orf137Q5JT78 98 aa9.35□□□□□ -0.91
DDX56-202ENST00000415758 DIRC1Q969H9 104 aa9.35□□□□□ -0.91
DDX56-202ENST00000415758 C2orf48Q96LS8 159 aa9.35□□□□□ -0.91
DDX56-202ENST00000415758 ST20Q9HBF5 79 aa9.35□□□□□ -0.91
DDX56-202ENST00000415758 COX7A2LO14548 114 aa9.34□□□□□ -0.91
DDX56-202ENST00000415758 MALP21145 153 aa9.34□□□□□ -0.91
DDX56-202ENST00000415758 PRR26Q8N8Z3 221 aa9.34□□□□□ -0.91
DDX56-202ENST00000415758 CAMK2N2Q96S95 79 aa9.34□□□□□ -0.91
DDX56-202ENST00000415758 TMEM242Q9NWH2 141 aa9.34□□□□□ -0.91
DDX56-202ENST00000415758 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
DDX56-202ENST00000415758 IGLV7-43P04211 117 aa9.33□□□□□ -0.92
DDX56-202ENST00000415758 TAGLN2P37802 199 aaKnown RBP9.33□□□□□ -0.92
DDX56-202ENST00000415758 RNF151Q2KHN1 245 aa9.33□□□□□ -0.92
DDX56-202ENST00000415758 PHF5AQ7RTV0 110 aaKnown RBP9.33□□□□□ -0.92
DDX56-202ENST00000415758 C7orf77A4D0Y5 90 aa9.32□□□□□ -0.92
DDX56-202ENST00000415758 A8MWL6 223 aa9.31□□□□□ -0.92
DDX56-202ENST00000415758 H0Y9J4 135 aa9.31□□□□□ -0.92
DDX56-202ENST00000415758 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
DDX56-202ENST00000415758 RPL18AQ02543 176 aaKnown RBP9.3□□□□□ -0.92
DDX56-202ENST00000415758 TSKUQ8WUA8 353 aa9.3□□□□□ -0.92
DDX56-202ENST00000415758 TMEM191AQ9H0A3 160 aa9.3□□□□□ -0.92
DDX56-202ENST00000415758 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
DDX56-202ENST00000415758 GATCO43716 136 aaKnown RBP9.29□□□□□ -0.92
DDX56-202ENST00000415758 CT83Q5H943 113 aa9.29□□□□□ -0.92
DDX56-202ENST00000415758 OPRPNQ99935 248 aaPredicted RBP9.29□□□□□ -0.92
DDX56-202ENST00000415758 UBE2D4Q9Y2X8 147 aa9.29□□□□□ -0.92
DDX56-202ENST00000415758 F8WDY8 70 aa9.28□□□□□ -0.92
DDX56-202ENST00000415758 VCYO14598 125 aa9.28□□□□□ -0.92
DDX56-202ENST00000415758 KRTAP1-4P0C5Y4 121 aa9.28□□□□□ -0.92
DDX56-202ENST00000415758 RAB4AP20338 218 aa9.28□□□□□ -0.92
DDX56-202ENST00000415758 SMAGPQ0VAQ4 97 aa9.28□□□□□ -0.92
DDX56-202ENST00000415758 MRPL35Q9NZE8 188 aaKnown RBP9.28□□□□□ -0.92
DDX56-202ENST00000415758 TRAV13-1A0A0B4J241 112 aa9.27□□□□□ -0.93
DDX56-202ENST00000415758 C5orf38Q86SI9 138 aa9.27□□□□□ -0.93
DDX56-202ENST00000415758 KRTAP11-1Q8IUC1 163 aa9.27□□□□□ -0.93
DDX56-202ENST00000415758 OR10D4PQ8NGN7 298 aa9.27□□□□□ -0.93
DDX56-202ENST00000415758 KRTAP9-2Q9BYQ4 174 aa9.27□□□□□ -0.93
DDX56-202ENST00000415758 A0A087WZ39 114 aa9.26□□□□□ -0.93
DDX56-202ENST00000415758 A0A1B0GUT8 65 aa9.26□□□□□ -0.93
DDX56-202ENST00000415758 SPAG11BQ08648 103 aa9.26□□□□□ -0.93
DDX56-202ENST00000415758 BORCS7Q96B45 105 aa9.26□□□□□ -0.93
DDX56-202ENST00000415758 IMMP2LQ96T52 175 aa9.26□□□□□ -0.93
DDX56-202ENST00000415758 TMEM250H0YL14 139 aa9.25□□□□□ -0.93
DDX56-202ENST00000415758 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
DDX56-202ENST00000415758 FCER1GP30273 86 aa9.25□□□□□ -0.93
DDX56-202ENST00000415758 RNASE13Q5GAN3 156 aaKnown RBP9.25□□□□□ -0.93
DDX56-202ENST00000415758 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
DDX56-202ENST00000415758 A0A0U1RQV1 116 aa9.24□□□□□ -0.93
DDX56-202ENST00000415758 PPP1R17O96001 155 aa9.24□□□□□ -0.93
DDX56-202ENST00000415758 TMEM241Q24JQ0 296 aa9.24□□□□□ -0.93
DDX56-202ENST00000415758 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
DDX56-202ENST00000415758 FAM168BA1KXE4 195 aa9.23□□□□□ -0.93
DDX56-202ENST00000415758 HIGD1CA8MV81 97 aa9.23□□□□□ -0.93
DDX56-202ENST00000415758 RPL13AP40429 203 aaKnown RBP9.23□□□□□ -0.93
DDX56-202ENST00000415758 SUMO2P61956 95 aaKnown RBP9.23□□□□□ -0.93
DDX56-202ENST00000415758 PRR4Q16378 134 aa9.23□□□□□ -0.93
DDX56-202ENST00000415758 NRACQ8N912 160 aa9.23□□□□□ -0.93
DDX56-202ENST00000415758 KIR2DL4Q99706 377 aa9.23□□□□□ -0.93
DDX56-202ENST00000415758 IGHV3OR16-9A0A0B4J2B5 98 aa9.22□□□□□ -0.93
DDX56-202ENST00000415758 NDUFA1O15239 70 aa9.22□□□□□ -0.93
DDX56-202ENST00000415758 Q6ZUT4 128 aa9.22□□□□□ -0.93
DDX56-202ENST00000415758 C10orf25Q5T742 122 aa9.21□□□□□ -0.94
DDX56-202ENST00000415758 SLC51BQ86UW2 128 aa9.21□□□□□ -0.94
DDX56-202ENST00000415758 KRTAP7-1Q8IUC3 87 aa9.21□□□□□ -0.94
DDX56-202ENST00000415758 ORAOV1Q8WV07 137 aa9.21□□□□□ -0.94
DDX56-202ENST00000415758 FAM104AQ969W3 186 aa9.21□□□□□ -0.94
DDX56-202ENST00000415758 TMEM18Q96B42 140 aa9.21□□□□□ -0.94
DDX56-202ENST00000415758 CARHSP1Q9Y2V2 147 aaKnown RBP9.21□□□□□ -0.94
DDX56-202ENST00000415758 SMKR1H3BMG3 65 aa9.2□□□□□ -0.94
DDX56-202ENST00000415758 PPP1R2P9O14990 202 aa9.2□□□□□ -0.94
DDX56-202ENST00000415758 UBE2D1P51668 147 aa9.2□□□□□ -0.94
DDX56-202ENST00000415758 UNQ6190/PRO20217Q6UXQ8 127 aa9.2□□□□□ -0.94
DDX56-202ENST00000415758 FAM19A5Q7Z5A7 132 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 1158.1 ms