RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 A0A1B0GV90 55 aa13.34□□□□□ -0.27
CLDND1-203ENST00000394181 GTSF1LQ9H1H1 148 aa13.34□□□□□ -0.27
CLDND1-203ENST00000394181 A0A096LPF7 62 aa13.33□□□□□ -0.28
CLDND1-203ENST00000394181 A0A0J9YY99 117 aa13.33□□□□□ -0.28
CLDND1-203ENST00000394181 PRO0255Q9UI72 69 aa13.33□□□□□ -0.28
CLDND1-203ENST00000394181 E9PLD3 99 aa13.32□□□□□ -0.28
CLDND1-203ENST00000394181 PAPPA-AS1Q5QFB9 102 aa13.32□□□□□ -0.28
CLDND1-203ENST00000394181 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
CLDND1-203ENST00000394181 SPART-AS1P0CW21 52 aa13.32□□□□□ -0.28
CLDND1-203ENST00000394181 DGAT2L7PQ6IED9 249 aa13.32□□□□□ -0.28
CLDND1-203ENST00000394181 ZNF22P17026 224 aaPredicted RBP13.31□□□□□ -0.28
CLDND1-203ENST00000394181 LBHQ53QV2 105 aaPredicted RBP13.31□□□□□ -0.28
CLDND1-203ENST00000394181 TMEM243Q9BU79 118 aa13.31□□□□□ -0.28
CLDND1-203ENST00000394181 TRBV25-1A0A075B6N4 114 aa13.31□□□□□ -0.28
CLDND1-203ENST00000394181 PAX4O43316 350 aa13.31□□□□□ -0.28
CLDND1-203ENST00000394181 TIMM21Q9BVV7 248 aa13.31□□□□□ -0.28
CLDND1-203ENST00000394181 NPSP0C0P6 89 aa13.3□□□□□ -0.28
CLDND1-203ENST00000394181 HTN3P15516 51 aa13.3□□□□□ -0.28
CLDND1-203ENST00000394181 TSPEAR-AS2P59090 65 aa13.3□□□□□ -0.28
CLDND1-203ENST00000394181 BVES-AS1Q5T3Y7 98 aa13.3□□□□□ -0.28
CLDND1-203ENST00000394181 MGAM2Q2M2H8 2515 aa13.3□□□□□ -0.28
CLDND1-203ENST00000394181 IGHV3-64A0A075B6Q5 118 aa13.3□□□□□ -0.28
CLDND1-203ENST00000394181 TRBV6-8A0A0A6YYG3 113 aa13.3□□□□□ -0.28
CLDND1-203ENST00000394181 MRPS36P82909 103 aaKnown RBP13.3□□□□□ -0.28
CLDND1-203ENST00000394181 TMEM97Q5BJF2 176 aa13.3□□□□□ -0.28
CLDND1-203ENST00000394181 GAGE6Q13070 117 aa13.29□□□□□ -0.28
CLDND1-203ENST00000394181 ATP6V0E2Q8NHE4 81 aa13.29□□□□□ -0.28
CLDND1-203ENST00000394181 SIVA1O15304 175 aa13.28□□□□□ -0.28
CLDND1-203ENST00000394181 TRAV26-1A0A087WT03 109 aa13.28□□□□□ -0.28
CLDND1-203ENST00000394181 TMEM223A0PJW6 202 aa13.28□□□□□ -0.28
CLDND1-203ENST00000394181 F5H768 121 aa13.28□□□□□ -0.28
CLDND1-203ENST00000394181 ATP5G1P05496 136 aa13.28□□□□□ -0.28
CLDND1-203ENST00000394181 UBE2D1P51668 147 aa13.28□□□□□ -0.28
CLDND1-203ENST00000394181 UBE2L6O14933 153 aa13.27□□□□□ -0.28
CLDND1-203ENST00000394181 CDC42SE2Q9NRR3 84 aa13.27□□□□□ -0.28
CLDND1-203ENST00000394181 MYMXA0A1B0GTQ4 84 aa13.27□□□□□ -0.29
CLDND1-203ENST00000394181 C12orf74Q32Q52 190 aa13.27□□□□□ -0.29
CLDND1-203ENST00000394181 CSDC2Q9Y534 153 aaKnown RBP13.27□□□□□ -0.29
CLDND1-203ENST00000394181 AMMECR1LQ6DCA0 310 aa13.26□□□□□ -0.29
CLDND1-203ENST00000394181 Q6ZVH6 145 aa13.26□□□□□ -0.29
CLDND1-203ENST00000394181 HERVK_113P61574 105 aa13.25□□□□□ -0.29
CLDND1-203ENST00000394181 COX6A2Q02221 97 aa13.25□□□□□ -0.29
CLDND1-203ENST00000394181 COL5A1-AS1Q5SY13 56 aa13.25□□□□□ -0.29
CLDND1-203ENST00000394181 OR5A1Q8NGJ0 315 aa13.25□□□□□ -0.29
CLDND1-203ENST00000394181 CHCHD5Q9BSY4 110 aa13.25□□□□□ -0.29
CLDND1-203ENST00000394181 TINCRA0A1B0GVN0 87 aa13.25□□□□□ -0.29
CLDND1-203ENST00000394181 PLEKHB2Q96CS7 222 aa13.25□□□□□ -0.29
CLDND1-203ENST00000394181 IGLV4-60A0A075B6I1 120 aa13.24□□□□□ -0.29
CLDND1-203ENST00000394181 ZNF815PA8K554 130 aa13.24□□□□□ -0.29
CLDND1-203ENST00000394181 TRAV8-3A0A0A6YYJ7 113 aa13.24□□□□□ -0.29
CLDND1-203ENST00000394181 TRAV13-1A0A0B4J241 112 aa13.24□□□□□ -0.29
CLDND1-203ENST00000394181 ZNF25P17030 456 aaPredicted RBP13.24□□□□□ -0.29
CLDND1-203ENST00000394181 K7EIL1 84 aa13.23□□□□□ -0.29
CLDND1-203ENST00000394181 HIGD1BQ9P298 99 aa13.23□□□□□ -0.29
CLDND1-203ENST00000394181 K7EP13 123 aa13.22□□□□□ -0.29
CLDND1-203ENST00000394181 LINC00242Q5T6M2 205 aa13.22□□□□□ -0.29
CLDND1-203ENST00000394181 HSD52Q0P140 79 aa13.22□□□□□ -0.29
CLDND1-203ENST00000394181 LINC00469Q8N7U9 141 aa13.22□□□□□ -0.29
CLDND1-203ENST00000394181 CDKN2A-AS1Q9UH64 79 aa13.22□□□□□ -0.29
CLDND1-203ENST00000394181 J3QQQ9 107 aa13.21□□□□□ -0.29
CLDND1-203ENST00000394181 TMEM101Q96IK0 257 aa13.21□□□□□ -0.29
CLDND1-203ENST00000394181 H7C423 109 aa13.21□□□□□ -0.3
CLDND1-203ENST00000394181 SPINK8P0C7L1 97 aa13.21□□□□□ -0.3
CLDND1-203ENST00000394181 GEMIN7Q9H840 131 aaKnown RBP13.21□□□□□ -0.3
CLDND1-203ENST00000394181 A0A0J9YWU9 116 aa13.2□□□□□ -0.3
CLDND1-203ENST00000394181 LEPROTO15243 131 aa13.2□□□□□ -0.3
CLDND1-203ENST00000394181 MRAPQ8TCY5 172 aa13.2□□□□□ -0.3
CLDND1-203ENST00000394181 IGKV3OR2-268A0A0C4DH90 116 aa13.19□□□□□ -0.3
CLDND1-203ENST00000394181 DEFB121Q5J5C9 76 aa13.19□□□□□ -0.3
CLDND1-203ENST00000394181 IGHV3-30-3P0DP02 117 aa13.18□□□□□ -0.3
CLDND1-203ENST00000394181 Q6ZTC4 211 aa13.18□□□□□ -0.3
CLDND1-203ENST00000394181 GCSHP23434 173 aa13.18□□□□□ -0.3
CLDND1-203ENST00000394181 TIRAPP58753 221 aa13.18□□□□□ -0.3
CLDND1-203ENST00000394181 Q8N3U1 123 aa13.18□□□□□ -0.3
CLDND1-203ENST00000394181 ORAOV1Q8WV07 137 aa13.18□□□□□ -0.3
CLDND1-203ENST00000394181 HUWE1Q7Z6Z7 4374 aaKnown RBP13.18□□□□□ -0.3
CLDND1-203ENST00000394181 TMEM262E9PQX1 116 aa13.17□□□□□ -0.3
CLDND1-203ENST00000394181 LGALS3P17931 250 aaKnown RBP13.17□□□□□ -0.3
CLDND1-203ENST00000394181 FXYD2P54710 66 aa13.17□□□□□ -0.3
CLDND1-203ENST00000394181 IGLV5-45A0A087WSX0 123 aa13.17□□□□□ -0.3
CLDND1-203ENST00000394181 SMAGPQ0VAQ4 97 aa13.17□□□□□ -0.3
CLDND1-203ENST00000394181 SCGB1D4Q6XE38 83 aa13.17□□□□□ -0.3
CLDND1-203ENST00000394181 C11orf68Q9H3H3 251 aaKnown RBP13.16□□□□□ -0.3
CLDND1-203ENST00000394181 IGHV1-58A0A0C4DH39 117 aa13.15□□□□□ -0.3
CLDND1-203ENST00000394181 NANOS2P60321 138 aaKnown RBP13.15□□□□□ -0.3
CLDND1-203ENST00000394181 FAM19A3Q7Z5A8 133 aa13.15□□□□□ -0.3
CLDND1-203ENST00000394181 TEX48A0A1B0GUV7 120 aa13.15□□□□□ -0.3
CLDND1-203ENST00000394181 RBX1P62877 108 aa13.15□□□□□ -0.3
CLDND1-203ENST00000394181 HIST1H4GQ99525 98 aa13.15□□□□□ -0.3
CLDND1-203ENST00000394181 TAX1BP3O14907 124 aa13.14□□□□□ -0.31
CLDND1-203ENST00000394181 KPRPQ5T749 579 aaPredicted RBP13.14□□□□□ -0.31
CLDND1-203ENST00000394181 HERVK_113P63121 156 aa13.14□□□□□ -0.31
CLDND1-203ENST00000394181 MRPL23Q16540 153 aaKnown RBP13.14□□□□□ -0.31
CLDND1-203ENST00000394181 CEND1Q8N111 149 aa13.14□□□□□ -0.31
CLDND1-203ENST00000394181 SEC11AP67812 179 aa13.13□□□□□ -0.31
CLDND1-203ENST00000394181 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
CLDND1-203ENST00000394181 ICOSQ9Y6W8 199 aa13.13□□□□□ -0.31
CLDND1-203ENST00000394181 TM2D2Q9BX73 214 aa13.12□□□□□ -0.31
CLDND1-203ENST00000394181 CLPSL2Q6UWE3 100 aa13.11□□□□□ -0.31
CLDND1-203ENST00000394181 TM2D3Q9BRN9 247 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms