RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 CLEC2BQ92478 149 aa4.83□□□□□ -1.64
HMG20A-201ENST00000336216 ZMAT4Q9H898 229 aa4.83□□□□□ -1.64
HMG20A-201ENST00000336216 TRAV4A0A0B4J268 109 aa4.83□□□□□ -1.64
HMG20A-201ENST00000336216 XCL1P47992 114 aa4.83□□□□□ -1.64
HMG20A-201ENST00000336216 DEFB135Q30KP9 77 aa4.83□□□□□ -1.64
HMG20A-201ENST00000336216 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.83□□□□□ -1.64
HMG20A-201ENST00000336216 INAFM1C9JVW0 142 aa4.83□□□□□ -1.64
HMG20A-201ENST00000336216 DAD1P61803 113 aa4.83□□□□□ -1.64
HMG20A-201ENST00000336216 RHODO00212 210 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 SMCPP49901 116 aaPredicted RBP4.82□□□□□ -1.64
HMG20A-201ENST00000336216 LINC01620Q4KN68 170 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 Q6ZSV7 163 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 CARD19Q96LW7 228 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 ITPR2Q14571 2701 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 DNAH3Q8TD57 4116 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 CDIP1Q9H305 208 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 A8MZ25 164 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 CCDC179H3BU77 68 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 K7EMT4 169 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 ANGP03950 147 aaKnown RBP4.82□□□□□ -1.64
HMG20A-201ENST00000336216 HERV-K104P63124 156 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 Q6YL49 198 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 Q6ZTI0 123 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 PIFOQ8TCI5 191 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 TMEM141Q96I45 108 aa4.82□□□□□ -1.64
HMG20A-201ENST00000336216 IGLV2-18A0A075B6J9 118 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 CRPP02741 224 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 LINC00482Q8N8I6 264 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 TMEM243Q9BU79 118 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 ZNF580Q9UK33 172 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 K7EQG2 157 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 PSMB8P28062 276 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 TSPEAR-AS2P59090 65 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 MAP6D1Q9H9H5 199 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
HMG20A-201ENST00000336216 HRNRQ86YZ3 2850 aaPredicted RBP4.8□□□□□ -1.64
HMG20A-201ENST00000336216 CRLF1O75462 422 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
HMG20A-201ENST00000336216 ATP6V0E2Q8NHE4 81 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 CNFNQ9BYD5 112 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 Q9H8V8 135 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 SLC25A29Q8N8R3 303 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 NF1P21359 2839 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 UNC79Q9P2D8 2635 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 GYPEP15421 78 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 DEFB114Q30KQ6 69 aa4.8□□□□□ -1.64
HMG20A-201ENST00000336216 IGHV3-30P01768 117 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 IGHV3-30-5P0DP03 117 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 RNASE3P12724 160 aaKnown RBP4.79□□□□□ -1.64
HMG20A-201ENST00000336216 S100A7L2Q5SY68 101 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 GAGE2AQ6NT46 116 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 EDA2RQ9HAV5 297 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 CMYA5Q8N3K9 4069 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 IGHV3-33P01772 117 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 UBE2D1P51668 147 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 CMC4P56277 68 aaPredicted RBP4.79□□□□□ -1.64
HMG20A-201ENST00000336216 FHL3Q13643 280 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 C9orf153Q5TBE3 101 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 TMEM86BQ8N661 226 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 ZNF702PQ9H963 129 aa4.79□□□□□ -1.64
HMG20A-201ENST00000336216 CELSR2Q9HCU4 2923 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 MRPL23Q16540 153 aaKnown RBP4.78□□□□□ -1.64
HMG20A-201ENST00000336216 LINC01006Q8NI28 216 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 Q9HAA7 133 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 BAHCC1Q9P281 2608 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 LEPROTO15243 131 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 TRIAP1O43715 76 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 IGHV3-30-3P0DP02 117 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 ICOSQ9Y6W8 199 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 SS18Q15532 418 aa4.78□□□□□ -1.64
HMG20A-201ENST00000336216 DCANP1Q8TF63 244 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 C4orf3Q8WVX3 66 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 COPS9Q8WXC6 57 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 CUBNO60494 3623 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 A0A0J9YXY3 114 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 UBE2D3P61077 147 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 UBE2D2P62837 147 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 C20orf203Q8NBC4 194 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 IGLV1-40P01703 118 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 CRYGDP07320 174 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 PLA2G2AP14555 144 aa4.77□□□□□ -1.65
HMG20A-201ENST00000336216 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-201ENST00000336216 IGLV4-69A0A075B6H9 119 aa4.76□□□□□ -1.65
HMG20A-201ENST00000336216 TRBV10-2A0A0K0K1G8 114 aa4.76□□□□□ -1.65
HMG20A-201ENST00000336216 RBMY1BA6NDE4 496 aaKnown RBP4.76□□□□□ -1.65
HMG20A-201ENST00000336216 RBMY1EA6NEQ0 496 aaKnown RBP4.76□□□□□ -1.65
HMG20A-201ENST00000336216 PRB2P02812 416 aaPredicted RBP4.76□□□□□ -1.65
HMG20A-201ENST00000336216 RBMY1DP0C7P1 496 aaKnown RBP4.76□□□□□ -1.65
HMG20A-201ENST00000336216 RBMY1A1P0DJD3 496 aaKnown RBP4.76□□□□□ -1.65
HMG20A-201ENST00000336216 RBMY1CP0DJD4 496 aa4.76□□□□□ -1.65
HMG20A-201ENST00000336216 TIMM17AQ99595 171 aa4.76□□□□□ -1.65
HMG20A-201ENST00000336216 CELSR1Q9NYQ6 3014 aa4.76□□□□□ -1.65
HMG20A-201ENST00000336216 NSD1Q96L73 2696 aaPredicted RBP4.76□□□□□ -1.65
HMG20A-201ENST00000336216 TSHBP01222 138 aa4.76□□□□□ -1.65
HMG20A-201ENST00000336216 RHOHQ15669 191 aa4.76□□□□□ -1.65
HMG20A-201ENST00000336216 LOC100131303A0A0U1RQF7 123 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 FAM110AQ9BQ89 295 aa4.75□□□□□ -1.65
HMG20A-201ENST00000336216 LINC00467Q9BRT7 94 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms