RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 AP1S3Q96PC3 154 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 HSPB11Q9Y547 144 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 FAM25EA8MYX2 175 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 PEX7O00628 323 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 SMIM17P0DL12 118 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 RAB5CP51148 216 aa1.55□□□□□ -2.16
HIF1A-201ENST00000323441 EIF5AP63241 154 aaKnown RBP1.55□□□□□ -2.16
HIF1A-201ENST00000323441 PSMG3Q9BT73 122 aaPredicted RBP1.55□□□□□ -2.16
HIF1A-201ENST00000323441 GRIFINA4D1Z8 144 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 S100A5P33763 92 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 FHITP49789 147 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 SERF2P84101 59 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 GAGE2BQ13066 116 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 COTL1Q14019 142 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 PCOTHQ58A44 107 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 TRIQKQ629K1 86 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 RASL11AQ6T310 242 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 Q6ZNX1 250 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 NUDT10Q8NFP7 164 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 OR10AG1Q8NH19 301 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 NUDT11Q96G61 164 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 NIT2Q9NQR4 276 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 A0A087WZ39 114 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 LINC00959A0A1B0GUT2 108 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 FAM168BA1KXE4 195 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 C19orf71A6NCJ1 209 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 G3V3Q6 166 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 S100A9P06702 114 aaKnown RBP1.54□□□□□ -2.16
HIF1A-201ENST00000323441 PET100P0DJ07 73 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 Q8N377 158 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 RAB24Q969Q5 203 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 SEC22CQ9BRL7 303 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 MRPL35Q9NZE8 188 aaKnown RBP1.54□□□□□ -2.16
HIF1A-201ENST00000323441 IGLV8-61A0A075B6I0 122 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 H0YIZ8 118 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 M0R036 132 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 BCL2P10415 239 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 TWIST1Q15672 202 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 SPANXN1Q5VSR9 72 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 SUMO4Q6EEV6 95 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 IMMP2LQ96T52 175 aa1.54□□□□□ -2.16
HIF1A-201ENST00000323441 CCDC160A6NGH7 325 aa1.53□□□□□ -2.16
HIF1A-201ENST00000323441 EIF5AL1Q6IS14 154 aaKnown RBP1.53□□□□□ -2.16
HIF1A-201ENST00000323441 MRPL52Q86TS9 123 aaKnown RBP1.53□□□□□ -2.16
HIF1A-201ENST00000323441 OR10D4PQ8NGN7 298 aa1.53□□□□□ -2.16
HIF1A-201ENST00000323441 SDHCQ99643 169 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-201ENST00000323441 TNFSF18Q9UNG2 199 aa1.53□□□□□ -2.16
HIF1A-201ENST00000323441 FAM74A7A6NL05 159 aa1.53□□□□□ -2.16
HIF1A-201ENST00000323441 BCL2L11O43521 198 aa1.53□□□□□ -2.16
HIF1A-201ENST00000323441 NTF3P20783 257 aa1.53□□□□□ -2.16
HIF1A-201ENST00000323441 TMEM241Q24JQ0 296 aa1.53□□□□□ -2.16
HIF1A-201ENST00000323441 ACTR3CQ9C0K3 210 aaPredicted RBP1.53□□□□□ -2.16
HIF1A-201ENST00000323441 CSDC2Q9Y534 153 aaKnown RBP1.53□□□□□ -2.16
HIF1A-201ENST00000323441 LYRM1O43325 122 aa1.53□□□□□ -2.17
HIF1A-201ENST00000323441 NOL3O60936 208 aaKnown RBP1.53□□□□□ -2.17
HIF1A-201ENST00000323441 IGLC6P0CF74 106 aa1.53□□□□□ -2.17
HIF1A-201ENST00000323441 XCL1P47992 114 aa1.53□□□□□ -2.17
HIF1A-201ENST00000323441 NKX2-5P52952 324 aaPredicted RBP1.53□□□□□ -2.17
HIF1A-201ENST00000323441 UBE2G1P62253 170 aa1.53□□□□□ -2.17
HIF1A-201ENST00000323441 AMMECR1LQ6DCA0 310 aa1.53□□□□□ -2.17
HIF1A-201ENST00000323441 DAND5Q8N907 189 aa1.53□□□□□ -2.17
HIF1A-201ENST00000323441 CAMK2N2Q96S95 79 aa1.53□□□□□ -2.17
HIF1A-201ENST00000323441 F2Z2F3 143 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 COX7A2LO14548 114 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 PLA2G10O15496 165 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 BCE1O60756 84 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 MPC2O95563 127 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 TRGC1P0CF51 173 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 IL7P13232 177 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 ATP6V0CP27449 155 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 RPS20P60866 119 aaKnown RBP1.52□□□□□ -2.17
HIF1A-201ENST00000323441 TMEM101Q96IK0 257 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 CCDC32Q9BV29 185 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 CNFNQ9BYD5 112 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 CDC42SE2Q9NRR3 84 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 NUDT15Q9NV35 164 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
HIF1A-201ENST00000323441 TMSB15BA0A087X1C1 80 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 CTXND1A0A1B0GTU2 59 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 C1orf196B1AJZ1 125 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 HMGB3O15347 200 aaKnown RBP1.52□□□□□ -2.17
HIF1A-201ENST00000323441 APCSP02743 223 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 MZT2BQ6NZ67 158 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 TEX261Q6UWH6 196 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 OR2D3Q8NGH3 330 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 PPP1R1CQ8WVI7 109 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 BTF3L4Q96K17 158 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 SMDT1Q9H4I9 107 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 CYTL1Q9NRR1 136 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 TP73-AS1Q9UF72 201 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 TRBV6-5A0A0K0K1A5 114 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 B5MCH6 92 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 M0QXV9 152 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 CTRLP40313 264 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 RPL28P46779 137 aaKnown RBP1.52□□□□□ -2.17
HIF1A-201ENST00000323441 SMAGPQ0VAQ4 97 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 RNASEKQ6P5S7 137 aaKnown RBP1.52□□□□□ -2.17
HIF1A-201ENST00000323441 SMIM12Q96EX1 92 aa1.52□□□□□ -2.17
HIF1A-201ENST00000323441 IGKV3OR2-268A0A0C4DH90 116 aa1.51□□□□□ -2.17
HIF1A-201ENST00000323441 SPINK1P00995 79 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms