RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 ANKHD1Q8IWZ3 2542 aaKnown RBP8.59□□□□□ -1.03
PTPN4-201ENST00000263708 C10orf25Q5T742 122 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 LINC00322Q6ZN03 302 aaPredicted RBP8.59□□□□□ -1.03
PTPN4-201ENST00000263708 LINC00482Q8N8I6 264 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 NDUFC1O43677 76 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 C22orf34Q6ZV56 151 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 MT-ATP8P03928 68 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 DHRS4-AS1Q9P1J3 65 aa8.59□□□□□ -1.03
PTPN4-201ENST00000263708 H7C423 109 aa8.58□□□□□ -1.04
PTPN4-201ENST00000263708 A6NDX4 124 aa8.58□□□□□ -1.04
PTPN4-201ENST00000263708 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
PTPN4-201ENST00000263708 COA6Q5JTJ3 125 aaKnown RBP8.58□□□□□ -1.04
PTPN4-201ENST00000263708 C1orf147Q96MC9 270 aaPredicted RBP8.58□□□□□ -1.04
PTPN4-201ENST00000263708 SPINK1P00995 79 aa8.58□□□□□ -1.04
PTPN4-201ENST00000263708 PATE2Q6UY27 113 aa8.58□□□□□ -1.04
PTPN4-201ENST00000263708 LINC00526Q96FQ7 95 aa8.58□□□□□ -1.04
PTPN4-201ENST00000263708 CCDC168Q8NDH2 2452 aa8.58□□□□□ -1.04
PTPN4-201ENST00000263708 TRAV10A0A0B4J240 114 aa8.57□□□□□ -1.04
PTPN4-201ENST00000263708 ABCA2Q9BZC7 2435 aa8.57□□□□□ -1.04
PTPN4-201ENST00000263708 PLA2G2AP14555 144 aa8.57□□□□□ -1.04
PTPN4-201ENST00000263708 TMEM89A2RUT3 159 aa8.57□□□□□ -1.04
PTPN4-201ENST00000263708 TRBV6-5A0A0K0K1A5 114 aa8.57□□□□□ -1.04
PTPN4-201ENST00000263708 PIP4P1Q86T03 277 aa8.57□□□□□ -1.04
PTPN4-201ENST00000263708 RNASE8Q8TDE3 154 aaKnown RBP8.57□□□□□ -1.04
PTPN4-201ENST00000263708 C6orf99Q4VX62 202 aa8.56□□□□□ -1.04
PTPN4-201ENST00000263708 ALPK3Q96L96 1907 aa8.56□□□□□ -1.04
PTPN4-201ENST00000263708 RSPO1Q2MKA7 263 aaPredicted RBP8.56□□□□□ -1.04
PTPN4-201ENST00000263708 TRBV7-6A0A0J9YX20 115 aa8.56□□□□□ -1.04
PTPN4-201ENST00000263708 IGF1P05019 195 aa8.56□□□□□ -1.04
PTPN4-201ENST00000263708 DOPEY1Q5JWR5 2465 aa8.56□□□□□ -1.04
PTPN4-201ENST00000263708 LOC107984640A0A0U1RRK4 108 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 NUPR2A6NF83 97 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 IBA57-AS1B1ANH7 110 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 LINC01548A6NM66 108 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 MIFP14174 115 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 FAM167A-AS1Q96KT0 104 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 TRBV6-8A0A0A6YYG3 113 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 LOC100131303A0A0U1RQF7 123 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 DAZAP2Q15038 168 aaPredicted RBP8.55□□□□□ -1.04
PTPN4-201ENST00000263708 NEXN-AS1Q8NBZ9 246 aa8.55□□□□□ -1.04
PTPN4-201ENST00000263708 Q8N7P7 452 aa8.54□□□□□ -1.04
PTPN4-201ENST00000263708 PMAIP1Q13794 54 aa8.53□□□□□ -1.04
PTPN4-201ENST00000263708 SPRY4Q9C004 299 aa8.53□□□□□ -1.04
PTPN4-201ENST00000263708 CACNA1AO00555 2505 aa8.53□□□□□ -1.04
PTPN4-201ENST00000263708 TRIAP1O43715 76 aa8.53□□□□□ -1.04
PTPN4-201ENST00000263708 LINC00308Q8TCZ7 52 aa8.53□□□□□ -1.04
PTPN4-201ENST00000263708 KPRPQ5T749 579 aaPredicted RBP8.53□□□□□ -1.04
PTPN4-201ENST00000263708 SHISA2Q6UWI4 295 aa8.53□□□□□ -1.04
PTPN4-201ENST00000263708 IGHV6-1A0A0B4J1U7 121 aa8.53□□□□□ -1.04
PTPN4-201ENST00000263708 CRIPAKQ8N1N5 446 aa8.53□□□□□ -1.04
PTPN4-201ENST00000263708 LRP4O75096 1905 aa8.52□□□□□ -1.04
PTPN4-201ENST00000263708 ZNF843Q8N446 348 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 E7EUB6 86 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 M0R378 163 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 CFAP126Q5VTH2 177 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 ZNF524Q96C55 264 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 CLUHP3Q96NS8 147 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 NAV3Q8IVL0 2385 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 CELA1Q9UNI1 258 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 PIEZO2Q9H5I5 2752 aa8.52□□□□□ -1.05
PTPN4-201ENST00000263708 NANOS2P60321 138 aaKnown RBP8.52□□□□□ -1.05
PTPN4-201ENST00000263708 BBC3Q96PG8 261 aaPredicted RBP8.52□□□□□ -1.05
PTPN4-201ENST00000263708 Q8N976 141 aa8.51□□□□□ -1.05
PTPN4-201ENST00000263708 IGLV4-69A0A075B6H9 119 aa8.51□□□□□ -1.05
PTPN4-201ENST00000263708 Q6ZQY7 126 aa8.51□□□□□ -1.05
PTPN4-201ENST00000263708 DEFB114Q30KQ6 69 aa8.5□□□□□ -1.05
PTPN4-201ENST00000263708 HIVEP3Q5T1R4 2406 aa8.5□□□□□ -1.05
PTPN4-201ENST00000263708 CCDC140Q96MF4 163 aa8.5□□□□□ -1.05
PTPN4-201ENST00000263708 FSHBP01225 129 aa8.5□□□□□ -1.05
PTPN4-201ENST00000263708 C20orf173Q96LM9 149 aa8.5□□□□□ -1.05
PTPN4-201ENST00000263708 NDUFA7O95182 113 aa8.49□□□□□ -1.05
PTPN4-201ENST00000263708 IGLV5-52A0A0A0MRZ9 124 aa8.49□□□□□ -1.05
PTPN4-201ENST00000263708 IGLV3-1P01715 115 aa8.49□□□□□ -1.05
PTPN4-201ENST00000263708 C19orf71A6NCJ1 209 aa8.49□□□□□ -1.05
PTPN4-201ENST00000263708 A0A1B0GXF2 115 aa8.49□□□□□ -1.05
PTPN4-201ENST00000263708 PROK1P58294 105 aa8.49□□□□□ -1.05
PTPN4-201ENST00000263708 IGLV4-3A0A075B6K6 122 aa8.49□□□□□ -1.05
PTPN4-201ENST00000263708 Q6YL49 198 aa8.48□□□□□ -1.05
PTPN4-201ENST00000263708 IGLV2-8P01709 118 aa8.48□□□□□ -1.05
PTPN4-201ENST00000263708 RPL28P46779 137 aaKnown RBP8.48□□□□□ -1.05
PTPN4-201ENST00000263708 Q6Q795 121 aa8.48□□□□□ -1.05
PTPN4-201ENST00000263708 ODF3Q96PU9 254 aa8.48□□□□□ -1.05
PTPN4-201ENST00000263708 ZNF80P51504 273 aaPredicted RBP8.47□□□□□ -1.05
PTPN4-201ENST00000263708 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
PTPN4-201ENST00000263708 IGLV2-11P01706 119 aa8.47□□□□□ -1.05
PTPN4-201ENST00000263708 MYO9AB2RTY4 2548 aa8.47□□□□□ -1.05
PTPN4-201ENST00000263708 M0QXV9 152 aa8.47□□□□□ -1.05
PTPN4-201ENST00000263708 EBI3Q14213 229 aa8.47□□□□□ -1.05
PTPN4-201ENST00000263708 PTPRSQ13332 1948 aa8.47□□□□□ -1.05
PTPN4-201ENST00000263708 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
PTPN4-201ENST00000263708 CSDC2Q9Y534 153 aaKnown RBP8.46□□□□□ -1.05
PTPN4-201ENST00000263708 FRMD6-AS1P0C7T7 363 aa8.46□□□□□ -1.06
PTPN4-201ENST00000263708 LY6G6DO95868 133 aa8.46□□□□□ -1.06
PTPN4-201ENST00000263708 GDF5OSQ5U4N7 250 aa8.46□□□□□ -1.06
PTPN4-201ENST00000263708 SMIM11BQ8TCY0 68 aa8.45□□□□□ -1.06
PTPN4-201ENST00000263708 ZNF22P17026 224 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms