RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 PEMTQ9UBM1 199 aa9.83□□□□□ -0.84
VHL-201ENST00000256474 RPL13AP40429 203 aaKnown RBP9.82□□□□□ -0.84
VHL-201ENST00000256474 RPL32P62910 135 aaKnown RBP9.82□□□□□ -0.84
VHL-201ENST00000256474 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.82□□□□□ -0.84
VHL-201ENST00000256474 PLA2G2AP14555 144 aa9.82□□□□□ -0.84
VHL-201ENST00000256474 C11orf68Q9H3H3 251 aaKnown RBP9.82□□□□□ -0.84
VHL-201ENST00000256474 Q9H8V8 135 aa9.82□□□□□ -0.84
VHL-201ENST00000256474 INSP01308 110 aa9.82□□□□□ -0.84
VHL-201ENST00000256474 ATXN8Q156A1 80 aa9.81□□□□□ -0.84
VHL-201ENST00000256474 LINC01620Q4KN68 170 aa9.81□□□□□ -0.84
VHL-201ENST00000256474 GCN1Q92616 2671 aaKnown RBP9.81□□□□□ -0.84
VHL-201ENST00000256474 COX6CP09669 75 aa9.81□□□□□ -0.84
VHL-201ENST00000256474 FASNP49327 2511 aaKnown RBP9.81□□□□□ -0.84
VHL-201ENST00000256474 TRGV2A0A075B6R0 118 aa9.81□□□□□ -0.84
VHL-201ENST00000256474 IGHV1-58A0A0C4DH39 117 aa9.81□□□□□ -0.84
VHL-201ENST00000256474 IGHV4-31P0DP07 118 aa9.81□□□□□ -0.84
VHL-201ENST00000256474 Q6YL49 198 aa9.81□□□□□ -0.84
VHL-201ENST00000256474 Q6ZTI0 123 aa9.81□□□□□ -0.84
VHL-201ENST00000256474 COX6A2Q02221 97 aa9.8□□□□□ -0.84
VHL-201ENST00000256474 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
VHL-201ENST00000256474 GAGE7O76087 117 aa9.8□□□□□ -0.84
VHL-201ENST00000256474 GAGE12FP0CL80 117 aa9.8□□□□□ -0.84
VHL-201ENST00000256474 GAGE12GP0CL81 117 aa9.8□□□□□ -0.84
VHL-201ENST00000256474 GAGE12IP0CL82 117 aa9.8□□□□□ -0.84
VHL-201ENST00000256474 LINC00694P0DN24 101 aa9.8□□□□□ -0.84
VHL-201ENST00000256474 DSCR9P59020 149 aa9.8□□□□□ -0.84
VHL-201ENST00000256474 SETXQ7Z333 2677 aaKnown RBP9.79□□□□□ -0.84
VHL-201ENST00000256474 BRI3O95415 125 aa9.79□□□□□ -0.84
VHL-201ENST00000256474 PRIMA1Q86XR5 153 aa9.79□□□□□ -0.84
VHL-201ENST00000256474 ODF3Q96PU9 254 aa9.79□□□□□ -0.84
VHL-201ENST00000256474 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
VHL-201ENST00000256474 VSIG2Q96IQ7 327 aa9.79□□□□□ -0.84
VHL-201ENST00000256474 CHCHD7Q9BUK0 85 aa9.79□□□□□ -0.84
VHL-201ENST00000256474 ICOSQ9Y6W8 199 aa9.79□□□□□ -0.84
VHL-201ENST00000256474 SNCGO76070 127 aa9.79□□□□□ -0.84
VHL-201ENST00000256474 TEX29Q8N6K0 151 aa9.78□□□□□ -0.84
VHL-201ENST00000256474 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.78□□□□□ -0.84
VHL-201ENST00000256474 UBE2L6O14933 153 aa9.78□□□□□ -0.84
VHL-201ENST00000256474 LOC100131303A0A0U1RQF7 123 aa9.77□□□□□ -0.85
VHL-201ENST00000256474 TMEM89A2RUT3 159 aa9.77□□□□□ -0.85
VHL-201ENST00000256474 BBC3Q96PG8 261 aaPredicted RBP9.77□□□□□ -0.85
VHL-201ENST00000256474 TRAV8-4A0A0B4J246 113 aa9.77□□□□□ -0.85
VHL-201ENST00000256474 CIRBPQ14011 172 aaKnown RBP9.77□□□□□ -0.85
VHL-201ENST00000256474 DEFB114Q30KQ6 69 aa9.77□□□□□ -0.85
VHL-201ENST00000256474 MRPS36P82909 103 aaKnown RBP9.77□□□□□ -0.85
VHL-201ENST00000256474 RNF183Q96D59 192 aa9.77□□□□□ -0.85
VHL-201ENST00000256474 APCP25054 2843 aa9.76□□□□□ -0.85
VHL-201ENST00000256474 RS1O15537 224 aa9.76□□□□□ -0.85
VHL-201ENST00000256474 HERV-K104P63124 156 aa9.76□□□□□ -0.85
VHL-201ENST00000256474 TMEM101Q96IK0 257 aa9.76□□□□□ -0.85
VHL-201ENST00000256474 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
VHL-201ENST00000256474 ZFAND6Q6FIF0 208 aa9.76□□□□□ -0.85
VHL-201ENST00000256474 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
VHL-201ENST00000256474 A0A096LPF7 62 aa9.75□□□□□ -0.85
VHL-201ENST00000256474 A0A0B4J2C4 111 aa9.75□□□□□ -0.85
VHL-201ENST00000256474 CRLF1O75462 422 aa9.75□□□□□ -0.85
VHL-201ENST00000256474 GAGE6Q13070 117 aa9.75□□□□□ -0.85
VHL-201ENST00000256474 UBE2WQ96B02 151 aa9.75□□□□□ -0.85
VHL-201ENST00000256474 PIK3CD-AS1Q5SR53 167 aa9.75□□□□□ -0.85
VHL-201ENST00000256474 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
VHL-201ENST00000256474 FAM104AQ969W3 186 aa9.75□□□□□ -0.85
VHL-201ENST00000256474 TRAV4A0A0B4J268 109 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 J3QLI3 93 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 GAGE2BQ13066 116 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 ODF3L2Q3SX64 289 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 GAGE2EQ4V326 116 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 GAGE2DQ9UEU5 116 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 MIAQ16674 131 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 WFDC11Q8NEX6 87 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 DEFB130BP0DP73 79 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 DEFB130AP0DP74 79 aa9.74□□□□□ -0.85
VHL-201ENST00000256474 CITED2Q99967 270 aaPredicted RBP9.74□□□□□ -0.85
VHL-201ENST00000256474 MRPL23Q16540 153 aaKnown RBP9.73□□□□□ -0.85
VHL-201ENST00000256474 CLPSL2Q6UWE3 100 aa9.73□□□□□ -0.85
VHL-201ENST00000256474 TRGV4A0A0C4DH28 118 aa9.73□□□□□ -0.85
VHL-201ENST00000256474 TINCRA0A1B0GVN0 87 aa9.73□□□□□ -0.85
VHL-201ENST00000256474 CCL24O00175 119 aa9.73□□□□□ -0.85
VHL-201ENST00000256474 C15orf53Q8NAA6 179 aa9.73□□□□□ -0.85
VHL-201ENST00000256474 LITAFQ99732 161 aa9.72□□□□□ -0.85
VHL-201ENST00000256474 CHCHD5Q9BSY4 110 aa9.72□□□□□ -0.85
VHL-201ENST00000256474 PYGO1Q9Y3Y4 419 aa9.72□□□□□ -0.85
VHL-201ENST00000256474 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
VHL-201ENST00000256474 SCGB1A1P11684 91 aa9.72□□□□□ -0.85
VHL-201ENST00000256474 PFN2P35080 140 aa9.72□□□□□ -0.85
VHL-201ENST00000256474 C1orf158Q8N1D5 194 aa9.72□□□□□ -0.85
VHL-201ENST00000256474 C11orf72Q8NBR9 251 aa9.72□□□□□ -0.85
VHL-201ENST00000256474 DEFB113Q30KQ7 82 aa9.71□□□□□ -0.85
VHL-201ENST00000256474 ITPR2Q14571 2701 aa9.71□□□□□ -0.86
VHL-201ENST00000256474 H7C423 109 aa9.71□□□□□ -0.86
VHL-201ENST00000256474 HECTD1Q9ULT8 2610 aa9.7□□□□□ -0.86
VHL-201ENST00000256474 TRBV10-2A0A0K0K1G8 114 aa9.7□□□□□ -0.86
VHL-201ENST00000256474 LINC00242Q5T6M2 205 aa9.7□□□□□ -0.86
VHL-201ENST00000256474 C4orf3Q8WVX3 66 aa9.7□□□□□ -0.86
VHL-201ENST00000256474 LINC00158P58513 81 aa9.7□□□□□ -0.86
VHL-201ENST00000256474 C5orf38Q86SI9 138 aa9.7□□□□□ -0.86
VHL-201ENST00000256474 YAE1D1Q9NRH1 226 aa9.7□□□□□ -0.86
VHL-201ENST00000256474 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
VHL-201ENST00000256474 Q9HAA7 133 aa9.69□□□□□ -0.86
VHL-201ENST00000256474 A0A096LNT2 108 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms