RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 EGFRP00533 1210 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 TNNI2P48788 182 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 PPP4CP60510 307 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 PTH1RQ03431 593 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 UBE3CQ15386 1083 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 APOBEC3HQ6NTF7 200 aaKnown RBP12.2□□□□□ -0.46
PHGDH-224ENST00000641711 FAM83AQ86UY5 434 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 RASEFQ8IZ41 740 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
PHGDH-224ENST00000641711 TRAK2O60296 914 aa12.19□□□□□ -0.46
PHGDH-224ENST00000641711 PDE6AP16499 860 aa12.19□□□□□ -0.46
PHGDH-224ENST00000641711 DIXDC1Q155Q3 683 aa12.19□□□□□ -0.46
PHGDH-224ENST00000641711 SKOR2Q2VWA4 1001 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-224ENST00000641711 NBPF9Q3BBW0 867 aa12.19□□□□□ -0.46
PHGDH-224ENST00000641711 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
PHGDH-224ENST00000641711 KRT26Q7Z3Y9 468 aa12.19□□□□□ -0.46
PHGDH-224ENST00000641711 ZNF384Q8TF68 577 aa12.19□□□□□ -0.46
PHGDH-224ENST00000641711 PRMT6Q96LA8 375 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-224ENST00000641711 FAM227BQ96M60 508 aa12.19□□□□□ -0.46
PHGDH-224ENST00000641711 ZNF70Q9UC06 446 aaPredicted RBP12.19□□□□□ -0.46
PHGDH-224ENST00000641711 PAPPA2Q9BXP8 1791 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 PASKQ96RG2 1323 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 A0A0D9SFI3 127 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 POTEIP0CG38 1075 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 ADD2P35612 726 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 BTDP43251 543 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 ANGEL2Q5VTE6 544 aaKnown RBP12.18□□□□□ -0.46
PHGDH-224ENST00000641711 HOOK2Q96ED9 719 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 IDI2Q9BXS1 227 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 UPF3BQ9BZI7 483 aaKnown RBP12.18□□□□□ -0.46
PHGDH-224ENST00000641711 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
PHGDH-224ENST00000641711 RBM8AQ9Y5S9 174 aaKnown RBP12.18□□□□□ -0.46
PHGDH-224ENST00000641711 DDX60LQ5H9U9 1706 aaKnown RBP12.17□□□□□ -0.46
PHGDH-224ENST00000641711 NAV1Q8NEY1 1877 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 ENTPD3O75355 529 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 BAG4O95429 457 aaKnown RBP12.17□□□□□ -0.46
PHGDH-224ENST00000641711 ZKSCAN1P17029 563 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-224ENST00000641711 CYP7A1P22680 504 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 SLC9C2Q5TAH2 1124 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 VPS53Q5VIR6 699 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 RNF20Q5VTR2 975 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 MAGEB6Q8N7X4 407 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 TDRD3Q9H7E2 651 aaKnown RBP12.17□□□□□ -0.46
PHGDH-224ENST00000641711 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 MYH1P12882 1939 aa12.17□□□□□ -0.46
PHGDH-224ENST00000641711 TCRBV5S4A2TA0A5A2 114 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 GOLGA6L22H0YM25 854 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-224ENST00000641711 NF2P35240 595 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 RHBDL3P58872 404 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 FKBP1BP68106 108 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 MAP1SQ66K74 1059 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-224ENST00000641711 CDC42EP5Q6NZY7 148 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 APPBP2Q92624 585 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 EDC3Q96F86 508 aaKnown RBP12.16□□□□□ -0.46
PHGDH-224ENST00000641711 ALDH8A1Q9H2A2 487 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-224ENST00000641711 VEZTQ9HBM0 779 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 LIMCH1Q9UPQ0 1083 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 ZDHHC9Q9Y397 364 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 NDUFB9Q9Y6M9 179 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 ATRNL1Q5VV63 1379 aa12.16□□□□□ -0.46
PHGDH-224ENST00000641711 ZNF532Q9HCE3 1301 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 SLC27A2O14975 620 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 RNF113AO15541 343 aaKnown RBP12.15□□□□□ -0.46
PHGDH-224ENST00000641711 BRD1O95696 1058 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 PSMA5P28066 241 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 AK2P54819 239 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 MCMDC2Q4G0Z9 681 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 FAM151AQ8WW52 585 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 ZSCAN31Q96LW9 406 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-224ENST00000641711 DEFB129Q9H1M3 183 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 HELLSQ9NRZ9 838 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 USP40Q9NVE5 1235 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 CYP46A1Q9Y6A2 500 aa12.15□□□□□ -0.46
PHGDH-224ENST00000641711 ASTN2O75129 1339 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 CLRN2A0PK11 232 aa12.14□□□□□ -0.47
PHGDH-224ENST00000641711 UNCXA6NJT0 531 aa12.14□□□□□ -0.47
PHGDH-224ENST00000641711 WDHD1O75717 1129 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 CASTP20810 708 aaKnown RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 C1QTNF8P60827 252 aa12.14□□□□□ -0.47
PHGDH-224ENST00000641711 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
PHGDH-224ENST00000641711 RUFY3Q7L099 469 aa12.14□□□□□ -0.47
PHGDH-224ENST00000641711 ZNF589Q86UQ0 364 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 TEX11Q8IYF3 940 aa12.14□□□□□ -0.47
PHGDH-224ENST00000641711 JAKMIP1Q96N16 626 aaKnown RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 RIOK1Q9BRS2 568 aaKnown RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 GLIS2Q9BZE0 524 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 CRNKL1Q9BZJ0 848 aaKnown RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 SH2B1Q9NRF2 756 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 AATFQ9NY61 560 aaKnown RBP eCLIP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 PCDHAC2Q9Y5I4 1007 aa12.14□□□□□ -0.47
PHGDH-224ENST00000641711 U3KPZ7 1027 aaPredicted RBP12.14□□□□□ -0.47
PHGDH-224ENST00000641711 LAMB1P07942 1786 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 MAGEB6P1A0A0J9YX57 407 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 GNAT2P19087 354 aa12.13□□□□□ -0.47
PHGDH-224ENST00000641711 PKP1Q13835 747 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms