RNA–Protein interactions for RNA: ENST00000629667.2

PDLIM3-213, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-213ENST00000629667 CIAO1O76071 339 aa19.48■□□□□ 0.71
PDLIM3-213ENST00000629667 RGS3P49796 1198 aa19.48■□□□□ 0.71
PDLIM3-213ENST00000629667 GADL1Q6ZQY3 521 aa19.48■□□□□ 0.71
PDLIM3-213ENST00000629667 PRRT2Q7Z6L0 340 aaPredicted RBP19.48■□□□□ 0.71
PDLIM3-213ENST00000629667 ZGPATQ8N5A5 531 aaKnown RBP19.48■□□□□ 0.71
PDLIM3-213ENST00000629667 DOCK1Q14185 1865 aa19.48■□□□□ 0.71
PDLIM3-213ENST00000629667 PHF20L1A8MW92 1017 aa19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 ADCY3O60266 1144 aa19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 ENTPD3O75355 529 aa19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 FARP2O94887 1054 aaPredicted RBP19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 PTPRAP18433 802 aa19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 PHKA1P46020 1223 aa19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 IDI2Q9BXS1 227 aa19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 UNC93B1Q9H1C4 597 aa19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 LRRFIP2Q9Y608 721 aaKnown RBP19.47■□□□□ 0.71
PDLIM3-213ENST00000629667 ATRNL1Q5VV63 1379 aa19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 E9PSI1 815 aa19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 SGPL1O95470 568 aa19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 UBTFL1P0CB47 393 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 FLT3LGP49771 235 aa19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 SMCR8Q8TEV9 937 aaPredicted RBP19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 SLC45A1Q9Y2W3 748 aa19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 AFG3L2Q9Y4W6 797 aa19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 PHIPQ8WWQ0 1821 aa19.46■□□□□ 0.71
PDLIM3-213ENST00000629667 RANBP2P49792 3224 aaKnown RBP19.46■□□□□ 0.7
PDLIM3-213ENST00000629667 TNPO2O14787 897 aaKnown RBP19.45■□□□□ 0.7
PDLIM3-213ENST00000629667 IL15P40933 162 aaPredicted RBP19.45■□□□□ 0.7
PDLIM3-213ENST00000629667 DZIP1Q86YF9 867 aaKnown RBP19.45■□□□□ 0.7
PDLIM3-213ENST00000629667 SLF2Q8IX21 1173 aa19.45■□□□□ 0.7
PDLIM3-213ENST00000629667 ELNP15502 786 aa19.44■□□□□ 0.7
PDLIM3-213ENST00000629667 SH3BP5LQ7L8J4 393 aa19.44■□□□□ 0.7
PDLIM3-213ENST00000629667 PXYLP1Q8TE99 480 aa19.44■□□□□ 0.7
PDLIM3-213ENST00000629667 ABCF2Q9UG63 623 aa19.44■□□□□ 0.7
PDLIM3-213ENST00000629667 GAKO14976 1311 aa19.44■□□□□ 0.7
PDLIM3-213ENST00000629667 DOCK3Q8IZD9 2030 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 TRIM75PA6NK02 468 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 CTNND1O60716 968 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 TFRCP02786 760 aaKnown RBP19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 INHAP05111 366 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 MAP3K10Q02779 954 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 PICALMQ13492 652 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 ALDH1L2Q3SY69 923 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 CCDC102BQ68D86 513 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 SMC4Q9NTJ3 1288 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
PDLIM3-213ENST00000629667 DDTLA6NHG4 134 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 EVI5O60447 810 aa19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 CAPN2P17655 700 aa19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 ADORA1P30542 326 aa19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 IRF5Q13568 498 aa19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 DEFB118Q96PH6 123 aa19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 PRO3102Q9H379 93 aa19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 PA2G4Q9UQ80 394 aaKnown RBP19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 HDAC5Q9UQL6 1122 aa19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 RFX7Q2KHR2 1363 aa19.42■□□□□ 0.7
PDLIM3-213ENST00000629667 ZBTB22O15209 634 aa19.41■□□□□ 0.7
PDLIM3-213ENST00000629667 SLURP2P0DP57 97 aa19.41■□□□□ 0.7
PDLIM3-213ENST00000629667 BTDP43251 543 aa19.41■□□□□ 0.7
PDLIM3-213ENST00000629667 SPTY2D1Q68D10 685 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-213ENST00000629667 COA7Q96BR5 231 aa19.41■□□□□ 0.7
PDLIM3-213ENST00000629667 FAM163AQ96GL9 167 aaPredicted RBP19.41■□□□□ 0.7
PDLIM3-213ENST00000629667 DDX4Q9NQI0 724 aaKnown RBP19.41■□□□□ 0.7
PDLIM3-213ENST00000629667 AGTPBP1Q9UPW5 1226 aa19.41■□□□□ 0.7
PDLIM3-213ENST00000629667 SLFN5Q08AF3 891 aa19.4■□□□□ 0.7
PDLIM3-213ENST00000629667 RASGRF1Q13972 1273 aa19.4■□□□□ 0.7
PDLIM3-213ENST00000629667 ANKRD13CQ8N6S4 541 aa19.4■□□□□ 0.7
PDLIM3-213ENST00000629667 PNMA3Q9UL41 463 aa19.4■□□□□ 0.7
PDLIM3-213ENST00000629667 TIMM10P62072 90 aa19.39■□□□□ 0.69
PDLIM3-213ENST00000629667 CCDC84Q86UT8 332 aaPredicted RBP19.39■□□□□ 0.69
PDLIM3-213ENST00000629667 COPRSQ9NQ92 184 aa19.39■□□□□ 0.69
PDLIM3-213ENST00000629667 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.39■□□□□ 0.69
PDLIM3-213ENST00000629667 MROH7-TTC4A0A0A0MT08 1334 aa19.39■□□□□ 0.69
PDLIM3-213ENST00000629667 PDS5AQ29RF7 1337 aaKnown RBP19.39■□□□□ 0.69
PDLIM3-213ENST00000629667 ATAD5Q96QE3 1844 aa19.39■□□□□ 0.69
PDLIM3-213ENST00000629667 A0A1W2PPC1 479 aa19.38■□□□□ 0.69
PDLIM3-213ENST00000629667 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
PDLIM3-213ENST00000629667 ERICH6Q7L0X2 663 aa19.38■□□□□ 0.69
PDLIM3-213ENST00000629667 PAK6Q9NQU5 681 aaPredicted RBP19.38■□□□□ 0.69
PDLIM3-213ENST00000629667 TBC1D12O60347 775 aa19.37■□□□□ 0.69
PDLIM3-213ENST00000629667 FAM110CQ1W6H9 321 aa19.37■□□□□ 0.69
PDLIM3-213ENST00000629667 TREML2Q5T2D2 321 aa19.37■□□□□ 0.69
PDLIM3-213ENST00000629667 PAWRQ96IZ0 340 aaKnown RBP19.37■□□□□ 0.69
PDLIM3-213ENST00000629667 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.37■□□□□ 0.69
PDLIM3-213ENST00000629667 ALPK3Q96L96 1907 aa19.37■□□□□ 0.69
PDLIM3-213ENST00000629667 GPR75-ASB3A0A0A6YYF3 556 aa19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 A0A1B0GUL7 405 aa19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 MECOMQ03112 1051 aa19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 MVPQ14764 893 aaKnown RBP19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 NECAB2Q7Z6G3 386 aa19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 PROCA1Q8NCQ7 364 aaPredicted RBP19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 XAGE2Q96GT9 111 aa19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 CRISPLD2Q9H0B8 497 aa19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 OSBPL5Q9H0X9 879 aaPredicted RBP19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 NOB1Q9ULX3 412 aaKnown RBP19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 AKAP2Q9Y2D5 859 aa19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 LOC285556D6RIA3 1793 aa19.36■□□□□ 0.69
PDLIM3-213ENST00000629667 FAM196BA6NMK8 535 aa19.35■□□□□ 0.69
PDLIM3-213ENST00000629667 GCLCP48506 637 aaPredicted RBP19.35■□□□□ 0.69
PDLIM3-213ENST00000629667 RHBDL3P58872 404 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms