RNA–Protein interactions for RNA: ENST00000626119.2

COPS7A-222, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-222ENST00000626119 RIOK1Q9BRS2 568 aaKnown RBP23.3■■□□□ 1.32
COPS7A-222ENST00000626119 GOLPH3LQ9H4A5 285 aa23.3■■□□□ 1.32
COPS7A-222ENST00000626119 COL4A1P02462 1669 aa23.3■■□□□ 1.32
COPS7A-222ENST00000626119 FMNL1O95466 1100 aaPredicted RBP23.29■■□□□ 1.32
COPS7A-222ENST00000626119 POLR3DP05423 398 aaPredicted RBP23.29■■□□□ 1.32
COPS7A-222ENST00000626119 KRT40Q6A162 431 aa23.29■■□□□ 1.32
COPS7A-222ENST00000626119 JMYQ8N9B5 988 aa23.29■■□□□ 1.32
COPS7A-222ENST00000626119 MIGA1Q8NAN2 632 aa23.29■■□□□ 1.32
COPS7A-222ENST00000626119 FAM217BQ9NTX9 383 aaPredicted RBP23.29■■□□□ 1.32
COPS7A-222ENST00000626119 U2AF2P26368 475 aaKnown RBP eCLIP23.29■■□□□ 1.32
COPS7A-222ENST00000626119 RAB11FIP4Q86YS3 637 aa23.29■■□□□ 1.32
COPS7A-222ENST00000626119 TRIM22Q8IYM9 498 aa23.29■■□□□ 1.32
COPS7A-222ENST00000626119 FMR1NBQ8N0W7 255 aaPredicted RBP23.29■■□□□ 1.32
COPS7A-222ENST00000626119 NKX2-3Q8TAU0 364 aa23.29■■□□□ 1.32
COPS7A-222ENST00000626119 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.29■■□□□ 1.32
COPS7A-222ENST00000626119 PPP6R2O75170 966 aa23.28■■□□□ 1.32
COPS7A-222ENST00000626119 SLC39A14Q15043 492 aa23.28■■□□□ 1.32
COPS7A-222ENST00000626119 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.28■■□□□ 1.32
COPS7A-222ENST00000626119 NAP1L5Q96NT1 182 aaPredicted RBP23.28■■□□□ 1.32
COPS7A-222ENST00000626119 ANO10Q9NW15 660 aa23.28■■□□□ 1.32
COPS7A-222ENST00000626119 CLIC4Q9Y696 253 aa23.28■■□□□ 1.32
COPS7A-222ENST00000626119 CACNA1SQ13698 1873 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 NT5C2P49902 561 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 UBAC1Q9BSL1 405 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 SENP2Q9HC62 589 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 TOMM22Q9NS69 142 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 COL1A1P02452 1464 aaPredicted RBP23.27■■□□□ 1.32
COPS7A-222ENST00000626119 KIF28PB7ZC32 967 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 CMA1P23946 247 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 HIBADHP31937 336 aaKnown RBP23.27■■□□□ 1.32
COPS7A-222ENST00000626119 PLCB2Q00722 1185 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 GNL2Q13823 731 aaKnown RBP23.27■■□□□ 1.32
COPS7A-222ENST00000626119 RTN1Q16799 776 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 TACC3Q9Y6A5 838 aa23.27■■□□□ 1.32
COPS7A-222ENST00000626119 LY75O60449 1722 aa23.27■■□□□ 1.31
COPS7A-222ENST00000626119 FGRP09769 529 aa23.26■■□□□ 1.31
COPS7A-222ENST00000626119 ADGRA1Q86SQ6 560 aa23.26■■□□□ 1.31
COPS7A-222ENST00000626119 LUZP1Q86V48 1076 aa23.26■■□□□ 1.31
COPS7A-222ENST00000626119 ARHGEF1Q92888 912 aaKnown RBP23.26■■□□□ 1.31
COPS7A-222ENST00000626119 INCENPQ9NQS7 918 aa23.26■■□□□ 1.31
COPS7A-222ENST00000626119 SRP68Q9UHB9 627 aaKnown RBP23.26■■□□□ 1.31
COPS7A-222ENST00000626119 IQSEC3Q9UPP2 1182 aaPredicted RBP23.26■■□□□ 1.31
COPS7A-222ENST00000626119 RANBP6O60518 1105 aaKnown RBP23.25■■□□□ 1.31
COPS7A-222ENST00000626119 KCNQ4P56696 695 aa23.25■■□□□ 1.31
COPS7A-222ENST00000626119 SAFBQ15424 915 aaKnown RBP eCLIP23.25■■□□□ 1.31
COPS7A-222ENST00000626119 RRP12Q5JTH9 1297 aaKnown RBP23.25■■□□□ 1.31
COPS7A-222ENST00000626119 PHKBQ93100 1093 aa23.25■■□□□ 1.31
COPS7A-222ENST00000626119 NAT10Q9H0A0 1025 aaKnown RBP23.25■■□□□ 1.31
COPS7A-222ENST00000626119 DNAJC25Q9H1X3 360 aa23.25■■□□□ 1.31
COPS7A-222ENST00000626119 DEXIO95424 95 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 RXRAP19793 462 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.24■■□□□ 1.31
COPS7A-222ENST00000626119 GOLGA6L19H0YKK7 550 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 AP5Z1O43299 807 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 ADRA2BP18089 450 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 TRAPPC3LQ5T215 181 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 SPTY2D1Q68D10 685 aaPredicted RBP23.24■■□□□ 1.31
COPS7A-222ENST00000626119 PTF1AQ7RTS3 328 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 SDR42E1Q8WUS8 393 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 NSUN4Q96CB9 384 aaKnown RBP23.24■■□□□ 1.31
COPS7A-222ENST00000626119 TIGD1Q96MW7 591 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 SDF4Q9BRK5 362 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 SLC26A6Q9BXS9 759 aa23.24■■□□□ 1.31
COPS7A-222ENST00000626119 RFC4P35249 363 aa23.23■■□□□ 1.31
COPS7A-222ENST00000626119 SARM1Q6SZW1 724 aa23.23■■□□□ 1.31
COPS7A-222ENST00000626119 FANCBQ8NB91 859 aa23.23■■□□□ 1.31
COPS7A-222ENST00000626119 PIBF1Q8WXW3 757 aa23.23■■□□□ 1.31
COPS7A-222ENST00000626119 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.23■■□□□ 1.31
COPS7A-222ENST00000626119 TAF1LQ8IZX4 1826 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 MINDY4BA8MYZ0 360 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 ONECUT3O60422 494 aaPredicted RBP23.22■■□□□ 1.31
COPS7A-222ENST00000626119 TM4SF1P30408 202 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 CCDC144CPQ8IYA2 1237 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 ZNF654Q8IZM8 581 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 GJD4Q96KN9 370 aaPredicted RBP23.22■■□□□ 1.31
COPS7A-222ENST00000626119 ATP8A2Q9NTI2 1148 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 GJB4Q9NTQ9 266 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 FAM237AA0A1B0GTK4 181 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 NDUFA8P51970 172 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 IQCB1Q15051 598 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 SEC23AQ15436 765 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 AXDND1Q5T1B0 1012 aaPredicted RBP23.22■■□□□ 1.31
COPS7A-222ENST00000626119 IQCA1Q86XH1 822 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 PLA2G4DQ86XP0 818 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 CRACR2BQ8N4Y2 399 aaPredicted RBP23.22■■□□□ 1.31
COPS7A-222ENST00000626119 MYL10Q9BUA6 226 aa23.22■■□□□ 1.31
COPS7A-222ENST00000626119 CRNKL1Q9BZJ0 848 aaKnown RBP23.22■■□□□ 1.31
COPS7A-222ENST00000626119 FOXP1Q9H334 677 aaPredicted RBP23.22■■□□□ 1.31
COPS7A-222ENST00000626119 A0A1B0GVL5 298 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 MMP1P03956 469 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 TPM2P07951 284 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 CALM1P0DP23 149 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 CALM2P0DP24 149 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 CALM3P0DP25 149 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 CDC25BP30305 580 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 CEP57L1Q8IYX8 460 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 AIFM3Q96NN9 605 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 RNF26Q9BY78 433 aaPredicted RBP23.21■■□□□ 1.31
COPS7A-222ENST00000626119 LEMD3Q9Y2U8 911 aa23.21■■□□□ 1.31
COPS7A-222ENST00000626119 TAF1P21675 1872 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms