RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 SLC35F6Q8N357 371 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 RIN2Q8WYP3 895 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 HVCN1Q96D96 273 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 PPFIA2O75334 1257 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 PTH1RQ03431 593 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ARHGAP18Q8N392 663 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 GCFC2P16383 781 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ALDH1L2Q3SY69 923 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 AKNAD1Q5T1N1 836 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 C8orf74Q6P047 294 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 SELENOOQ9BVL4 669 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 MAEAQ7L5Y9 396 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 DHX40Q8IX18 779 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 EVI5LQ96CN4 794 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ANLNQ9NQW6 1124 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ZRANB1Q9UGI0 708 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 SFI1A8K8P3 1242 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 EEF2P13639 858 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ARMCX5Q6P1M9 558 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 CEP85Q6P2H3 762 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 GSTA5Q7RTV2 222 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 TTC6Q86TZ1 520 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 TMCO5AQ8N6Q1 288 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 JDP2Q8WYK2 163 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ECT2Q9H8V3 914 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 MTMR6Q9Y217 621 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 EMILIN1Q9Y6C2 1016 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 IGF1RP08069 1367 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 SMYD4Q8IYR2 804 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 KRT12Q99456 494 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 MYL10Q9BUA6 226 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 STIM2Q9P246 746 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 SLC27A2O14975 620 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 KCTD19Q17RG1 926 aaPredicted RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 OLFML2BQ68BL8 750 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 NBPF10Q6P3W6 841 aaKnown RBP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS13D-214ENST00000620676 IMPACTQ9P2X3 320 aa5.63□□□□□ -1.51
VPS13D-214ENST00000620676 ZNF189O75820 626 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 HNRNPCP07910 306 aaKnown RBP eCLIP5.62□□□□□ -1.519e-6■■■□□ 16.8
VPS13D-214ENST00000620676 TTC5Q8N0Z6 440 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 NELFBQ8WX92 580 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 C2CD5Q86YS7 1000 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 RHPN1Q8TCX5 695 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 ZBTB7BO15156 539 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 PLS1Q14651 629 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 AMOTQ4VCS5 1084 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 SPATA17Q96L03 361 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 VAT1LQ9HCJ6 419 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 MED4Q9NPJ6 270 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 PFDN4Q9NQP4 134 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 CLIC4Q9Y696 253 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 CTNNA1P35221 906 aaKnown RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 ANKRD44Q8N8A2 993 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 MYOM3Q5VTT5 1437 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 CORO7P57737 925 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 KIF2BQ8N4N8 673 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 TSG101Q99816 390 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 SAR1BQ9Y6B6 198 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 GRIPAP1Q4V328 841 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 IRX2Q9BZI1 471 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 DCTPP1Q9H773 170 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 TPD52L2O43399 206 aaKnown RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 CCDC197Q8NCU1 140 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 KLHDC4Q8TBB5 520 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 PHF20L1A8MW92 1017 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 ARHGAP6O43182 974 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 RPS6KB1P23443 525 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 ALDH3A1P30838 453 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 KRT83P78385 493 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 ARHGAP42A6NI28 874 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 DIAPH2O60879 1101 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 ASIC1P78348 528 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 CAPN12Q6ZSI9 719 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 SRGAP1Q7Z6B7 1085 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 MARCH10Q8NA82 808 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 TTLL11Q8NHH1 800 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 CTNNA2P26232 953 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 RASSF10A6NK89 507 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 CHUKO15111 745 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 PRC1O43663 620 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 IRX1P78414 480 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 KIAA0825Q8IV33 1275 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 MPHOSPH6Q99547 160 aaKnown RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 BTBD11A6QL63 1104 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 DNAJC6O75061 913 aa5.62□□□□□ -1.51
VPS13D-214ENST00000620676 TRIP13Q15645 432 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-214ENST00000620676 VWA3AA6NCI4 1184 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 STAT6P42226 847 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 NLRP5P59047 1200 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 ANO1Q5XXA6 986 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 TAB3Q8N5C8 712 aaPredicted RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 TBC1D7Q9P0N9 293 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 ZNF449Q6P9G9 518 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 DDX23Q9BUQ8 820 aaKnown RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 NCOA2Q15596 1464 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 MIER3Q7Z3K6 550 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 ELAC2Q9BQ52 826 aaKnown RBP5.61□□□□□ -1.51
VPS13D-214ENST00000620676 DMPKQ09013 629 aa5.61□□□□□ -1.51
VPS13D-214ENST00000620676 G2E3Q7L622 706 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms