RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 MROH7-TTC4A0A0A0MT08 1334 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 TTC41PQ6P2S7 1318 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 ECM29Q5VYK3 1845 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 GPR75-ASB3A0A0A6YYF3 556 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 WDHD1O75717 1129 aaPredicted RBP6.35□□□□□ -1.39
SHMT1-211ENST00000618902 IDH1O75874 414 aaKnown RBP6.35□□□□□ -1.39
SHMT1-211ENST00000618902 SLC10A3P09131 477 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 GSPT1P15170 499 aaKnown RBP6.35□□□□□ -1.39
SHMT1-211ENST00000618902 ZNF157P51786 506 aaPredicted RBP6.35□□□□□ -1.39
SHMT1-211ENST00000618902 RBM5P52756 815 aaKnown RBP eCLIP6.35□□□□□ -1.39
SHMT1-211ENST00000618902 HTRA3P83110 453 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 LDLRAD1Q5T700 205 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 DCAF15Q66K64 600 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 DZIP1Q86YF9 867 aaKnown RBP6.35□□□□□ -1.39
SHMT1-211ENST00000618902 ANKRD13AQ8IZ07 590 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 MAGEB6Q8N7X4 407 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 IDI2Q9BXS1 227 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 TBC1D2Q9BYX2 928 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 OSBPL3Q9H4L5 887 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 DDX4Q9NQI0 724 aaKnown RBP6.35□□□□□ -1.39
SHMT1-211ENST00000618902 LRP2BPQ9P2M1 347 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 FAM198AQ9UFP1 575 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 MKRN1Q9UHC7 482 aaKnown RBP6.35□□□□□ -1.39
SHMT1-211ENST00000618902 THSD7BQ9C0I4 1608 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 SSC5DA1L4H1 1573 aa6.35□□□□□ -1.39
SHMT1-211ENST00000618902 ZNF532Q9HCE3 1301 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 HTTP42858 3142 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 MANSC4A6NHS7 340 aaPredicted RBP6.34□□□□□ -1.39
SHMT1-211ENST00000618902 TCP10L2B9ZVM9 353 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 SMIM22K7EJ46 135 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 ENTPD3O75355 529 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 GLRX3O76003 335 aaKnown RBP6.34□□□□□ -1.39
SHMT1-211ENST00000618902 BAG3O95817 575 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 CYP7A1P22680 504 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 ADD2P35612 726 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 BTDP43251 543 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 TM4SF4P48230 202 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 PPP4CP60510 307 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 EVX2Q03828 476 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 RASA3Q14644 834 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 TTF1Q15361 905 aaPredicted RBP6.34□□□□□ -1.39
SHMT1-211ENST00000618902 NAA16Q6N069 864 aaPredicted RBP6.34□□□□□ -1.39
SHMT1-211ENST00000618902 MOB2Q70IA6 237 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 SH3BP5LQ7L8J4 393 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 KBTBD3Q8NAB2 608 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 MIGA1Q8NAN2 632 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 SH3RF3Q8TEJ3 882 aaPredicted RBP6.34□□□□□ -1.39
SHMT1-211ENST00000618902 FAM151AQ8WW52 585 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 TEPSINQ96N21 525 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 SEC62Q99442 399 aaKnown RBP6.34□□□□□ -1.39
SHMT1-211ENST00000618902 RIOK1Q9BRS2 568 aaKnown RBP6.34□□□□□ -1.39
SHMT1-211ENST00000618902 TMEM39BQ9GZU3 492 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 VEZTQ9HBM0 779 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 GINM1Q9NU53 330 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 USP40Q9NVE5 1235 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 FZD1Q9UP38 647 aa6.34□□□□□ -1.39
SHMT1-211ENST00000618902 MAST2Q6P0Q8 1798 aa6.34□□□□□ -1.4
SHMT1-211ENST00000618902 FAM155AB1AL88 458 aaPredicted RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 FOXP2O15409 715 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 PRKAB2O43741 272 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 TBC1D12O60347 775 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 HSPA1AP0DMV8 641 aaKnown RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 HSPA1BP0DMV9 641 aaKnown RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 RGS3P49796 1198 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 MAP3K10Q02779 954 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 ARHGEF6Q15052 776 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 PKN2Q16513 984 aaKnown RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 LRRFIP1Q32MZ4 808 aaKnown RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 NBPF12Q5TAG4 269 aaPredicted RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 SLC9C2Q5TAH2 1124 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 LCORLQ8N3X6 602 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 OSBP2Q969R2 916 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 SLC10A4Q96EP9 437 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 NOL10Q9BSC4 688 aaKnown RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 PUS7LQ9H0K6 701 aaKnown RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 DHX36Q9H2U1 1008 aaKnown RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 AATFQ9NY61 560 aaKnown RBP eCLIP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 CSADQ9Y600 493 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 COL2A1P02458 1487 aaPredicted RBP6.33□□□□□ -1.4
SHMT1-211ENST00000618902 MYH7P12883 1935 aa6.33□□□□□ -1.4
SHMT1-211ENST00000618902 BRCA2P51587 3418 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 ATRNL1Q5VV63 1379 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 CDK5RAP2Q96SN8 1893 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 TESPA1A2RU30 521 aaPredicted RBP6.32□□□□□ -1.4
SHMT1-211ENST00000618902 DDTLA6NHG4 134 aaPredicted RBP6.32□□□□□ -1.4
SHMT1-211ENST00000618902 M0R2C6 588 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 ERC2O15083 957 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 MBD4O95243 580 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 CAPN2P17655 700 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 TCP10Q12799 353 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 MAP3K12Q12852 859 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 TTLL12Q14166 644 aaPredicted RBP6.32□□□□□ -1.4
SHMT1-211ENST00000618902 UBE3CQ15386 1083 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 ZMYM1Q5SVZ6 1142 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 TTC22Q5TAA0 569 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 CYP4F22Q6NT55 531 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 PAXIP1Q6ZW49 1069 aaPredicted RBP6.32□□□□□ -1.4
SHMT1-211ENST00000618902 TEX11Q8IYF3 940 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 GPATCH3Q96I76 525 aa6.32□□□□□ -1.4
SHMT1-211ENST00000618902 FAM227BQ96M60 508 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms