RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 MMRN2Q9H8L6 949 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 SPHKAPQ2M3C7 1700 aa16.53■□□□□ 0.24
VPS36-207ENST00000611132 USP27XA6NNY8 438 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 A6NNZ2 444 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 GIGYF1O75420 1035 aaPredicted RBP16.52■□□□□ 0.24
VPS36-207ENST00000611132 TUBB8Q3ZCM7 444 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 GBP6Q6ZN66 633 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 EXOC4Q96A65 974 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 VWA3AA6NCI4 1184 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 HSPD1P10809 573 aaKnown RBP16.52■□□□□ 0.24
VPS36-207ENST00000611132 HAUS7Q99871 368 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 POLR3EQ9NVU0 708 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 TLR7Q9NYK1 1049 aaKnown RBP16.52■□□□□ 0.24
VPS36-207ENST00000611132 SERTAD1Q9UHV2 236 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 CDC23Q9UJX2 597 aa16.52■□□□□ 0.24
VPS36-207ENST00000611132 RRP15Q9Y3B9 282 aaKnown RBP16.52■□□□□ 0.24
VPS36-207ENST00000611132 DEXIO95424 95 aa16.52■□□□□ 0.23
VPS36-207ENST00000611132 LINC00301Q8NCQ3 95 aa16.52■□□□□ 0.23
VPS36-207ENST00000611132 NEURL1BA8MQ27 555 aa16.52■□□□□ 0.23
VPS36-207ENST00000611132 MED4Q9NPJ6 270 aa16.52■□□□□ 0.23
VPS36-207ENST00000611132 IKQ13123 557 aaPredicted RBP16.51■□□□□ 0.23
VPS36-207ENST00000611132 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 CEP57Q86XR8 500 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 FAM71BQ8TC56 605 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 PCDHA5Q9Y5H7 936 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 GBP2P32456 591 aaPredicted RBP16.51■□□□□ 0.23
VPS36-207ENST00000611132 LONRF3Q496Y0 759 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 TICAM2Q86XR7 235 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 IFT81Q8WYA0 676 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 EZRP15311 586 aaKnown RBP16.51■□□□□ 0.23
VPS36-207ENST00000611132 ASIC1P78348 528 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 CCDC114Q96M63 670 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 PARD6BQ9BYG5 372 aa16.51■□□□□ 0.23
VPS36-207ENST00000611132 TSPY2A6NKD2 308 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 SLC39A14Q15043 492 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 SIRT1Q96EB6 747 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 TSGA10Q9BZW7 698 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 ABCA6Q8N139 1617 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 BICDL2A1A5D9 508 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 USP5P45974 858 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 KRT28Q7Z3Y7 464 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 JAKMIP2Q96AA8 810 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 CARMIL3Q8ND23 1372 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 GCOM1H8Y6P7 765 aaPredicted RBP16.5■□□□□ 0.23
VPS36-207ENST00000611132 MYZAPP0CAP1 466 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 GOLGA8FQ08AF8 430 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 GOLGA8DPQ0D2H9 430 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 IFI16Q16666 785 aaKnown RBP16.5■□□□□ 0.23
VPS36-207ENST00000611132 RPGRIP1Q96KN7 1286 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 RTL9Q8NET4 1388 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 ZFYVE16Q7Z3T8 1539 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 NEFHP12036 1026 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 ATP2B2Q01814 1243 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 ZNF174Q15697 407 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 OSBPL5Q9H0X9 879 aaPredicted RBP16.5■□□□□ 0.23
VPS36-207ENST00000611132 RABEP2Q9H5N1 569 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 TAB2Q9NYJ8 693 aa16.5■□□□□ 0.23
VPS36-207ENST00000611132 TBC1D8BQ0IIM8 1120 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 PPFIA1Q13136 1202 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 ZRSR2Q15696 482 aaKnown RBP16.49■□□□□ 0.23
VPS36-207ENST00000611132 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 TRIML1Q8N9V2 468 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 PLBD2Q8NHP8 589 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 DBNLQ9UJU6 430 aaKnown RBP16.49■□□□□ 0.23
VPS36-207ENST00000611132 IGSF1Q8N6C5 1336 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 PAK1Q13153 545 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 TOB2Q14106 344 aaPredicted RBP16.49■□□□□ 0.23
VPS36-207ENST00000611132 NBPF6Q5VWK0 638 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 NBPF4Q96M43 638 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 ZKSCAN3Q9BRR0 538 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 MYL10Q9BUA6 226 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 KAT14Q9H8E8 782 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 PPP1R12BO60237 982 aaPredicted RBP16.49■□□□□ 0.23
VPS36-207ENST00000611132 GNAT2P19087 354 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 SEPT7Q16181 437 aaKnown RBP16.49■□□□□ 0.23
VPS36-207ENST00000611132 GDAP1L1Q96MZ0 367 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 SAR1BQ9Y6B6 198 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 EFCAB6Q5THR3 1501 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 CYP7A1P22680 504 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 MCM7P33993 719 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 TEX13AQ9BXU3 409 aaPredicted RBP16.49■□□□□ 0.23
VPS36-207ENST00000611132 COPRSQ9NQ92 184 aa16.49■□□□□ 0.23
VPS36-207ENST00000611132 ADD1P35611 737 aaKnown RBP16.48■□□□□ 0.23
VPS36-207ENST00000611132 SND1Q7KZF4 910 aaKnown RBP eCLIP16.48■□□□□ 0.23
VPS36-207ENST00000611132 XAGE2Q96GT9 111 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 CLIC6Q96NY7 704 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 CALM1P0DP23 149 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 CALM2P0DP24 149 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 CALM3P0DP25 149 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 CALML3P27482 149 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 PDE4BQ07343 736 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 ZNF444Q8N0Y2 327 aaPredicted RBP16.48■□□□□ 0.23
VPS36-207ENST00000611132 MAPK8IP1Q9UQF2 711 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 GOLGA6L10A0A0M3HER8 536 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 GCP02774 474 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 PRPF4BQ13523 1007 aaKnown RBP16.48■□□□□ 0.23
VPS36-207ENST00000611132 VSTM4Q8IW00 320 aa16.48■□□□□ 0.23
VPS36-207ENST00000611132 ZNF594Q96JF6 807 aaPredicted RBP16.48■□□□□ 0.23
VPS36-207ENST00000611132 INCENPQ9NQS7 918 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 178.6 ms