RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 TMPRSS2O15393 492 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 VAMP1P23763 118 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 PTPN11Q06124 597 aaPredicted RBP6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 ZC3H12AQ5D1E8 599 aaKnown RBP6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 CDPF1Q6NVV7 123 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 RELL1Q8IUW5 271 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 MRRFQ96E11 262 aaKnown RBP6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 RSRP1Q9BUV0 290 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 GSX1Q9H4S2 264 aaPredicted RBP6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 CRIM1Q9NZV1 1036 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 AP4E1Q9UPM8 1137 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 RAXQ9Y2V3 346 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 ACTL7BQ9Y614 415 aa6.04□□□□□ -1.44
CKS1BP3-201ENST00000600888 DYRK3O43781 588 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 TFE3P19532 575 aaPredicted RBP6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 LMNB1P20700 586 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 MAP4P27816 1152 aaKnown RBP6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 ASPAP45381 313 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 ID3Q02535 119 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 TSNAXIP1Q2TAA8 658 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 SGO2Q562F6 1265 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 CLEC10AQ8IUN9 316 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 PHC3Q8NDX5 983 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 FANCD2OSQ96PS1 177 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 KCNF1Q9H3M0 494 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 SEMA6BQ9H3T3 888 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 DISC1Q9NRI5 854 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 FAM105AQ9NUU6 356 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 KIAA1522Q9P206 1035 aaPredicted RBP6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 STOML1Q9UBI4 398 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 PCDHA4Q9UN74 947 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 TLR6Q9Y2C9 796 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 PCDHB5Q9Y5E4 795 aa6.03□□□□□ -1.44
CKS1BP3-201ENST00000600888 DNMBPQ6XZF7 1577 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 F6X3S4 739 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 BEND4Q6ZU67 534 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 ERMP1Q7Z2K6 904 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 FBLIM1Q8WUP2 373 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 GAL3ST3Q96A11 431 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 TMEM74Q96NL1 305 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 FAM83CQ9BQN1 747 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 ATXN3LQ9H3M9 355 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 TOPBP1Q92547 1522 aa6.02□□□□□ -1.45
CKS1BP3-201ENST00000600888 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 HMX2A2RU54 273 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 MINDY4BA8MYZ0 360 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 RECKO95980 971 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 RXRBP28702 533 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 GBP2P32456 591 aaPredicted RBP6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 ERVK-24P63145 666 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 PWP1Q13610 501 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 SEPT6Q14141 434 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 INPP5AQ14642 412 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 HS2ST1Q7LGA3 356 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 TRIM42Q8IWZ5 723 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 EZH1Q92800 747 aaPredicted RBP6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 ZNF428Q96B54 188 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 YIPF2Q9BWQ6 316 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 MIR1-1HGQ9H1L0 117 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 ACSS3Q9H6R3 686 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 C7orf69Q9H7B7 122 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 COPRSQ9NQ92 184 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 GGT7Q9UJ14 662 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 IFT140Q96RY7 1462 aa6.01□□□□□ -1.45
CKS1BP3-201ENST00000600888 FAM95CA0A1B0GW59 222 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 DCDC2CA8MYV0 355 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 K7ELQ4 463 aaPredicted RBP6□□□□□ -1.45
CKS1BP3-201ENST00000600888 PF4P02776 101 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 NFICP08651 508 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 RAB6AP20340 208 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 LMNB2Q03252 620 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 RING1Q06587 406 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 CAMK2GQ13555 558 aaPredicted RBP6□□□□□ -1.45
CKS1BP3-201ENST00000600888 NFKBIBQ15653 356 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 PDZRN4Q6ZMN7 1036 aaPredicted RBP6□□□□□ -1.45
CKS1BP3-201ENST00000600888 C12orf40Q86WS4 652 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 RNF214Q8ND24 703 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 JARID2Q92833 1246 aaPredicted RBP6□□□□□ -1.45
CKS1BP3-201ENST00000600888 METTL5Q9NRN9 209 aaKnown RBP6□□□□□ -1.45
CKS1BP3-201ENST00000600888 KBTBD4Q9NVX7 518 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 CSADQ9Y600 493 aa6□□□□□ -1.45
CKS1BP3-201ENST00000600888 TARBP1Q13395 1621 aaKnown RBP5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 ZNF76P36508 570 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 FANCCQ00597 558 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 TTLL4Q14679 1199 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 PPM1JQ5JR12 505 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 LRFN4Q6PJG9 635 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 PAOXQ6QHF9 649 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 CCDC84Q86UT8 332 aaPredicted RBP5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 ELMO3Q96BJ8 720 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 RHOVQ96L33 236 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 SEMA6CQ9H3T2 930 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 PIDD1Q9HB75 910 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 SNCAIPQ9Y6H5 919 aa5.99□□□□□ -1.45
CKS1BP3-201ENST00000600888 SCAMP3O14828 347 aaKnown RBP5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 RNGTTO60942 597 aaKnown RBP5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 ADAM23O75077 832 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 FSTP19883 344 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 ITGB7P26010 798 aa5.98□□□□□ -1.45
CKS1BP3-201ENST00000600888 CDK8P49336 464 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms