RNA–Protein interactions for RNA: ENST00000600237.5

SYMPK-215, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 5,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-215ENST00000600237 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 ARHGAP6O43182 974 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 GPAA1O43292 621 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 PARP1P09874 1014 aaKnown RBP16.3■□□□□ 0.2
SYMPK-215ENST00000600237 OTUD6BQ8N6M0 293 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 FAM76AQ8TAV0 307 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 ZNF174Q15697 407 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 DNAJC10Q8IXB1 793 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 RRAGDQ9NQL2 400 aaPredicted RBP16.3■□□□□ 0.2
SYMPK-215ENST00000600237 FAM173BQ6P4H8 233 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 MYRIPQ8NFW9 859 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
SYMPK-215ENST00000600237 MTUS1Q9ULD2 1270 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 PLXNC1O60486 1568 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 PLEKHG1Q9ULL1 1385 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 MYCNP04198 464 aaPredicted RBP16.3■□□□□ 0.2
SYMPK-215ENST00000600237 CYP26C1Q6V0L0 522 aa16.3■□□□□ 0.2
SYMPK-215ENST00000600237 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
SYMPK-215ENST00000600237 CNNM4Q6P4Q7 775 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 FERP16591 822 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 CEP63Q96MT8 703 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 PPP1R9BQ96SB3 815 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 ABCC4O15439 1325 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 ZNF202O95125 648 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
SYMPK-215ENST00000600237 NLRP12P59046 1061 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 ATP6V0A2Q9Y487 856 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 TRAF5O00463 557 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 ZNF496Q96IT1 587 aaPredicted RBP16.29■□□□□ 0.2
SYMPK-215ENST00000600237 ZKSCAN3Q9BRR0 538 aa16.29■□□□□ 0.2
SYMPK-215ENST00000600237 NCOA5Q9HCD5 579 aaKnown RBP16.29■□□□□ 0.2
SYMPK-215ENST00000600237 CALCOCO2Q13137 446 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 CPLX4Q7Z7G2 160 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 IFT81Q8WYA0 676 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 NUP58Q9BVL2 599 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 UFL1O94874 794 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 CCDC6Q16204 474 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 LETM2Q2VYF4 491 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 NAP1L3Q99457 506 aaPredicted RBP16.28■□□□□ 0.2
SYMPK-215ENST00000600237 GLT8D2Q9H1C3 349 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 TMEM94Q12767 1356 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 EFCAB6Q5THR3 1501 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 B4DLN1 442 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 RBM26Q5T8P6 1007 aaKnown RBP16.28■□□□□ 0.2
SYMPK-215ENST00000600237 TMTC1Q8IUR5 882 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 TCHPQ9BT92 498 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 A6NNZ2 444 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 RIOK3O14730 519 aaKnown RBP16.28■□□□□ 0.2
SYMPK-215ENST00000600237 GCKRQ14397 625 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 TUBB8Q3ZCM7 444 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 LRRC45Q96CN5 670 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 ZFP91Q96JP5 570 aaPredicted RBP16.28■□□□□ 0.2
SYMPK-215ENST00000600237 MLH3Q9UHC1 1453 aa16.28■□□□□ 0.2
SYMPK-215ENST00000600237 GSTA5Q7RTV2 222 aa16.27■□□□□ 0.2
SYMPK-215ENST00000600237 SMAP1Q8IYB5 467 aaPredicted RBP16.27■□□□□ 0.2
SYMPK-215ENST00000600237 CCDC26Q8TAB7 109 aa16.27■□□□□ 0.2
SYMPK-215ENST00000600237 JAKMIP2Q96AA8 810 aa16.27■□□□□ 0.2
SYMPK-215ENST00000600237 CCDC97Q96F63 343 aaPredicted RBP16.27■□□□□ 0.2
SYMPK-215ENST00000600237 CTNND2Q9UQB3 1225 aa16.27■□□□□ 0.2
SYMPK-215ENST00000600237 SYNRGQ9UMZ2 1314 aa16.27■□□□□ 0.2
SYMPK-215ENST00000600237 POLR2DO15514 142 aaKnown RBP16.27■□□□□ 0.2
SYMPK-215ENST00000600237 HIBADHP31937 336 aaKnown RBP16.27■□□□□ 0.2
SYMPK-215ENST00000600237 PDE4DQ08499 809 aa16.27■□□□□ 0.2
SYMPK-215ENST00000600237 SUCLG2Q96I99 432 aa16.27■□□□□ 0.2
SYMPK-215ENST00000600237 MICALL1Q8N3F8 863 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 MSANTD4Q8NCY6 345 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 PAIP2Q9BPZ3 127 aaKnown RBP16.27■□□□□ 0.19
SYMPK-215ENST00000600237 DSCC1Q9BVC3 393 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 VPS16Q9H269 839 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 COMMD10Q9Y6G5 202 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 ZEB2O60315 1214 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.19
SYMPK-215ENST00000600237 PLCB3Q01970 1234 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 RGS22Q8NE09 1264 aa16.27■□□□□ 0.19
SYMPK-215ENST00000600237 ATP5JP18859 108 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 EIF4A1P60842 406 aaKnown RBP16.26■□□□□ 0.19
SYMPK-215ENST00000600237 NFE2L3Q9Y4A8 694 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 CEP83Q9Y592 693 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 PAK1Q13153 545 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 PLIN2Q99541 437 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 SELENOSQ9BQE4 189 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 TTC38Q5R3I4 469 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 CDC37L1Q7L3B6 337 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 CSGALNACT2Q8N6G5 542 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 KLHDC4Q8TBB5 520 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 TMEM63CQ9P1W3 806 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 V9GY48 417 aaPredicted RBP16.26■□□□□ 0.19
SYMPK-215ENST00000600237 IBTKQ9P2D0 1353 aaPredicted RBP16.26■□□□□ 0.19
SYMPK-215ENST00000600237 KRT40Q6A162 431 aa16.26■□□□□ 0.19
SYMPK-215ENST00000600237 GADD45BO75293 160 aaPredicted RBP16.25■□□□□ 0.19
SYMPK-215ENST00000600237 U2AF2P26368 475 aaKnown RBP eCLIP16.25■□□□□ 0.194e-7■■■■■ 30.7
SYMPK-215ENST00000600237 SSH3Q8TE77 659 aa16.25■□□□□ 0.19
SYMPK-215ENST00000600237 NPHP4O75161 1426 aaPredicted RBP16.25■□□□□ 0.19
SYMPK-215ENST00000600237 EPB41P11171 864 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms