RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 PUS7LQ9H0K6 701 aaKnown RBP18.08■□□□□ 0.48
TRIM28-207ENST00000597136 MAGEB6P1A0A0J9YX57 407 aa18.07■□□□□ 0.48
TRIM28-207ENST00000597136 RNF113AO15541 343 aaKnown RBP18.07■□□□□ 0.48
TRIM28-207ENST00000597136 UBE3CQ15386 1083 aa18.07■□□□□ 0.48
TRIM28-207ENST00000597136 FSD1Q9BTV5 496 aa18.07■□□□□ 0.48
TRIM28-207ENST00000597136 ABT1Q9ULW3 272 aaKnown RBP18.07■□□□□ 0.48
TRIM28-207ENST00000597136 DDTLA6NHG4 134 aaPredicted RBP18.06■□□□□ 0.48
TRIM28-207ENST00000597136 UBE2Q2LH0YL09 131 aa18.06■□□□□ 0.48
TRIM28-207ENST00000597136 SAPCD2Q86UD0 394 aa18.06■□□□□ 0.48
TRIM28-207ENST00000597136 MAPKAPK5Q8IW41 473 aa18.06■□□□□ 0.48
TRIM28-207ENST00000597136 LCORLQ8N3X6 602 aa18.06■□□□□ 0.48
TRIM28-207ENST00000597136 C2orf69Q8N8R5 385 aa18.06■□□□□ 0.48
TRIM28-207ENST00000597136 ARMT1Q9H993 441 aa18.06■□□□□ 0.48
TRIM28-207ENST00000597136 DDX60LQ5H9U9 1706 aaKnown RBP18.06■□□□□ 0.48
TRIM28-207ENST00000597136 ENTPD3O75355 529 aa18.05■□□□□ 0.48
TRIM28-207ENST00000597136 USP2O75604 605 aaPredicted RBP18.05■□□□□ 0.48
TRIM28-207ENST00000597136 SUPT20HL1Q3ZLR7 823 aa18.05■□□□□ 0.48
TRIM28-207ENST00000597136 ZSCAN25Q6NSZ9 544 aa18.05■□□□□ 0.48
TRIM28-207ENST00000597136 OSBP2Q969R2 916 aa18.05■□□□□ 0.48
TRIM28-207ENST00000597136 SEC62Q99442 399 aaKnown RBP18.05■□□□□ 0.48
TRIM28-207ENST00000597136 MKRN1Q9UHC7 482 aaKnown RBP18.05■□□□□ 0.48
TRIM28-207ENST00000597136 TLL2Q9Y6L7 1015 aa18.05■□□□□ 0.48
TRIM28-207ENST00000597136 PRKAB2O43741 272 aa18.04■□□□□ 0.48
TRIM28-207ENST00000597136 PLCG2P16885 1265 aa18.04■□□□□ 0.48
TRIM28-207ENST00000597136 NF2P35240 595 aa18.04■□□□□ 0.48
TRIM28-207ENST00000597136 TTLL12Q14166 644 aaPredicted RBP18.04■□□□□ 0.48
TRIM28-207ENST00000597136 TMED8Q6PL24 325 aaPredicted RBP18.04■□□□□ 0.48
TRIM28-207ENST00000597136 MIGA2Q7L4E1 593 aa18.04■□□□□ 0.48
TRIM28-207ENST00000597136 DNAJC5GQ8N7S2 189 aa18.04■□□□□ 0.48
TRIM28-207ENST00000597136 ANGEL1Q9UNK9 670 aaKnown RBP18.04■□□□□ 0.48
TRIM28-207ENST00000597136 MBD4O95243 580 aa18.04■□□□□ 0.48
TRIM28-207ENST00000597136 HUNKP57058 714 aa18.04■□□□□ 0.48
TRIM28-207ENST00000597136 ZSCAN29Q8IWY8 852 aaPredicted RBP18.04■□□□□ 0.48
TRIM28-207ENST00000597136 OSBPL5Q9H0X9 879 aaPredicted RBP18.04■□□□□ 0.48
TRIM28-207ENST00000597136 FLT1P17948 1338 aa18.03■□□□□ 0.48
TRIM28-207ENST00000597136 M0R2C6 588 aa18.03■□□□□ 0.48
TRIM28-207ENST00000597136 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
TRIM28-207ENST00000597136 DEFB115Q30KQ5 88 aa18.03■□□□□ 0.48
TRIM28-207ENST00000597136 SDR42E1Q8WUS8 393 aa18.03■□□□□ 0.48
TRIM28-207ENST00000597136 APPBP2Q92624 585 aa18.03■□□□□ 0.48
TRIM28-207ENST00000597136 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.03■□□□□ 0.48
TRIM28-207ENST00000597136 SAP30BPQ9UHR5 308 aaKnown RBP18.03■□□□□ 0.48
TRIM28-207ENST00000597136 PHIPQ8WWQ0 1821 aa18.02■□□□□ 0.48
TRIM28-207ENST00000597136 RPAP1Q9BWH6 1393 aaPredicted RBP18.02■□□□□ 0.48
TRIM28-207ENST00000597136 CDC45O75419 566 aa18.02■□□□□ 0.48
TRIM28-207ENST00000597136 ZFYP08048 801 aaPredicted RBP18.02■□□□□ 0.48
TRIM28-207ENST00000597136 SLC4A8Q2Y0W8 1093 aa18.02■□□□□ 0.48
TRIM28-207ENST00000597136 TICAM2Q86XR7 235 aa18.02■□□□□ 0.48
TRIM28-207ENST00000597136 CSRNP1Q96S65 589 aa18.02■□□□□ 0.48
TRIM28-207ENST00000597136 PALD1Q9ULE6 856 aa18.02■□□□□ 0.48
TRIM28-207ENST00000597136 PPP1R12BO60237 982 aaPredicted RBP18.01■□□□□ 0.47
TRIM28-207ENST00000597136 USP5P45974 858 aa18.01■□□□□ 0.47
TRIM28-207ENST00000597136 ZMYM1Q5SVZ6 1142 aa18.01■□□□□ 0.47
TRIM28-207ENST00000597136 CYP4F22Q6NT55 531 aa18.01■□□□□ 0.47
TRIM28-207ENST00000597136 STRBPQ96SI9 672 aaKnown RBP18.01■□□□□ 0.47
TRIM28-207ENST00000597136 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
TRIM28-207ENST00000597136 DOCK1Q14185 1865 aa18.01■□□□□ 0.47
TRIM28-207ENST00000597136 RASSF10A6NK89 507 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 FAM196BA6NMK8 535 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 CHMLP26374 656 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 FKBP1BP68106 108 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 EVX2Q03828 476 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 C8orf34Q49A92 452 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 LDLRAD1Q5T700 205 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 AIDAQ96BJ3 306 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 CLMNQ96JQ2 1002 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 FAM227BQ96M60 508 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 CRNKL1Q9BZJ0 848 aaKnown RBP18■□□□□ 0.47
TRIM28-207ENST00000597136 LAMB1P07942 1786 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 GRM1Q13255 1194 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 MAP3K11Q16584 847 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 ARMC9Q7Z3E5 817 aa18■□□□□ 0.47
TRIM28-207ENST00000597136 PTPRFP10586 1907 aa17.99■□□□□ 0.47
TRIM28-207ENST00000597136 HIP1O00291 1037 aa17.99■□□□□ 0.47
TRIM28-207ENST00000597136 GPAA1O43292 621 aa17.99■□□□□ 0.47
TRIM28-207ENST00000597136 VEGFBP49765 207 aa17.99■□□□□ 0.47
TRIM28-207ENST00000597136 LRRFIP1Q32MZ4 808 aaKnown RBP17.99■□□□□ 0.47
TRIM28-207ENST00000597136 PAXIP1Q6ZW49 1069 aaPredicted RBP17.99■□□□□ 0.47
TRIM28-207ENST00000597136 CERS3Q8IU89 383 aa17.99■□□□□ 0.47
TRIM28-207ENST00000597136 KLRG1Q96E93 195 aa17.99■□□□□ 0.47
TRIM28-207ENST00000597136 DCP1AQ9NPI6 582 aaPredicted RBP17.99■□□□□ 0.47
TRIM28-207ENST00000597136 SLC4A4Q9Y6R1 1079 aa17.99■□□□□ 0.47
TRIM28-207ENST00000597136 COL2A1P02458 1487 aaPredicted RBP17.98■□□□□ 0.47
TRIM28-207ENST00000597136 A0A0D9SFI3 127 aa17.98■□□□□ 0.47
TRIM28-207ENST00000597136 SMIM22K7EJ46 135 aa17.98■□□□□ 0.47
TRIM28-207ENST00000597136 NMIQ13287 307 aaPredicted RBP17.98■□□□□ 0.47
TRIM28-207ENST00000597136 RGMBQ6NW40 437 aa17.98■□□□□ 0.47
TRIM28-207ENST00000597136 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.98■□□□□ 0.47
TRIM28-207ENST00000597136 ZKSCAN4Q969J2 545 aaPredicted RBP17.98■□□□□ 0.47
TRIM28-207ENST00000597136 DIAPH3Q9NSV4 1193 aa17.98■□□□□ 0.47
TRIM28-207ENST00000597136 GSG1L2A8MUP6 293 aa17.97■□□□□ 0.47
TRIM28-207ENST00000597136 CYP2D6P10635 497 aa17.97■□□□□ 0.47
TRIM28-207ENST00000597136 INPP5BP32019 993 aa17.97■□□□□ 0.47
TRIM28-207ENST00000597136 IREB2P48200 963 aaKnown RBP17.97■□□□□ 0.47
TRIM28-207ENST00000597136 PLCD1P51178 756 aa17.97■□□□□ 0.47
TRIM28-207ENST00000597136 ZNF157P51786 506 aaPredicted RBP17.97■□□□□ 0.47
TRIM28-207ENST00000597136 MAP3K10Q02779 954 aa17.97■□□□□ 0.47
TRIM28-207ENST00000597136 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
TRIM28-207ENST00000597136 ZIC5Q96T25 663 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms