RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 DDX4Q9NQI0 724 aaKnown RBP31.14■■■□□ 2.58
TRIM28-204ENST00000594806 FOCADQ5VW36 1801 aa31.14■■■□□ 2.58
TRIM28-204ENST00000594806 CDK5RAP2Q96SN8 1893 aa31.13■■■□□ 2.57
TRIM28-204ENST00000594806 MAGEB6P1A0A0J9YX57 407 aa31.13■■■□□ 2.57
TRIM28-204ENST00000594806 UBE2Q2LH0YL09 131 aa31.13■■■□□ 2.57
TRIM28-204ENST00000594806 USP2O75604 605 aaPredicted RBP31.13■■■□□ 2.57
TRIM28-204ENST00000594806 PICALMQ13492 652 aa31.13■■■□□ 2.57
TRIM28-204ENST00000594806 TICAM2Q86XR7 235 aa31.13■■■□□ 2.57
TRIM28-204ENST00000594806 CDAN1Q8IWY9 1227 aa31.13■■■□□ 2.57
TRIM28-204ENST00000594806 MIGA1Q8NAN2 632 aa31.13■■■□□ 2.57
TRIM28-204ENST00000594806 WDR33Q9C0J8 1336 aaKnown RBP31.13■■■□□ 2.57
TRIM28-204ENST00000594806 PRKG1Q13976 671 aa31.12■■■□□ 2.57
TRIM28-204ENST00000594806 MOB2Q70IA6 237 aa31.12■■■□□ 2.57
TRIM28-204ENST00000594806 PLEKHM2Q8IWE5 1019 aa31.12■■■□□ 2.57
TRIM28-204ENST00000594806 RIOK1Q9BRS2 568 aaKnown RBP31.12■■■□□ 2.57
TRIM28-204ENST00000594806 OSBPL5Q9H0X9 879 aaPredicted RBP31.12■■■□□ 2.57
TRIM28-204ENST00000594806 ATRNL1Q5VV63 1379 aa31.12■■■□□ 2.57
TRIM28-204ENST00000594806 ZNF157P51786 506 aaPredicted RBP31.11■■■□□ 2.57
TRIM28-204ENST00000594806 DYNLL1P63167 89 aaKnown RBP31.11■■■□□ 2.57
TRIM28-204ENST00000594806 CYP4F22Q6NT55 531 aa31.11■■■□□ 2.57
TRIM28-204ENST00000594806 ZSCAN29Q8IWY8 852 aaPredicted RBP31.11■■■□□ 2.57
TRIM28-204ENST00000594806 ZFPM1Q8IX07 1006 aa31.11■■■□□ 2.57
TRIM28-204ENST00000594806 JMYQ8N9B5 988 aa31.11■■■□□ 2.57
TRIM28-204ENST00000594806 DHX36Q9H2U1 1008 aaKnown RBP31.11■■■□□ 2.57
TRIM28-204ENST00000594806 ANKRD13AQ8IZ07 590 aa31.1■■■□□ 2.57
TRIM28-204ENST00000594806 TGFBRAP1Q8WUH2 860 aa31.1■■■□□ 2.57
TRIM28-204ENST00000594806 EVI5LQ96CN4 794 aa31.1■■■□□ 2.57
TRIM28-204ENST00000594806 CSRNP1Q96S65 589 aa31.1■■■□□ 2.57
TRIM28-204ENST00000594806 ERICH6BQ5W0A0 696 aa31.09■■■□□ 2.57
TRIM28-204ENST00000594806 ZNF341Q9BYN7 854 aa31.09■■■□□ 2.57
TRIM28-204ENST00000594806 RNF113AO15541 343 aaKnown RBP31.08■■■□□ 2.57
TRIM28-204ENST00000594806 MAP2K2P36507 400 aa31.08■■■□□ 2.57
TRIM28-204ENST00000594806 NOGQ13253 232 aa31.08■■■□□ 2.57
TRIM28-204ENST00000594806 CENPQQ7L2Z9 268 aaPredicted RBP31.08■■■□□ 2.57
TRIM28-204ENST00000594806 CRNKL1Q9BZJ0 848 aaKnown RBP31.08■■■□□ 2.57
TRIM28-204ENST00000594806 FLT1P17948 1338 aa31.07■■■□□ 2.56
TRIM28-204ENST00000594806 DDTLA6NHG4 134 aaPredicted RBP31.07■■■□□ 2.56
TRIM28-204ENST00000594806 USP5P45974 858 aa31.07■■■□□ 2.56
TRIM28-204ENST00000594806 MAP3K9P80192 1104 aa31.07■■■□□ 2.56
TRIM28-204ENST00000594806 MAP3K10Q02779 954 aa31.07■■■□□ 2.56
TRIM28-204ENST00000594806 SH3BP5LQ7L8J4 393 aa31.07■■■□□ 2.56
TRIM28-204ENST00000594806 FSD1Q9BTV5 496 aa31.07■■■□□ 2.56
TRIM28-204ENST00000594806 TBC1D12O60347 775 aa31.06■■■□□ 2.56
TRIM28-204ENST00000594806 SLC10A3P09131 477 aa31.06■■■□□ 2.56
TRIM28-204ENST00000594806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.06■■■□□ 2.562e-6■□□□□ 8
TRIM28-204ENST00000594806 APPBP2Q92624 585 aa31.06■■■□□ 2.56
TRIM28-204ENST00000594806 FZD1Q9UP38 647 aa31.06■■■□□ 2.56
TRIM28-204ENST00000594806 MAPKAPK5Q8IW41 473 aa31.05■■■□□ 2.56
TRIM28-204ENST00000594806 SLC10A4Q96EP9 437 aa31.05■■■□□ 2.56
TRIM28-204ENST00000594806 PI4KBQ9UBF8 816 aa31.05■■■□□ 2.56
TRIM28-204ENST00000594806 CEP350Q5VT06 3117 aa31.04■■■□□ 2.56
TRIM28-204ENST00000594806 FAM155AB1AL88 458 aaPredicted RBP31.04■■■□□ 2.56
TRIM28-204ENST00000594806 MIGA2Q7L4E1 593 aa31.04■■■□□ 2.56
TRIM28-204ENST00000594806 RASAL3Q86YV0 1011 aa31.04■■■□□ 2.56
TRIM28-204ENST00000594806 AIDAQ96BJ3 306 aa31.04■■■□□ 2.56
TRIM28-204ENST00000594806 ZNF112Q9UJU3 913 aa31.04■■■□□ 2.56
TRIM28-204ENST00000594806 MYH1P12882 1939 aa31.04■■■□□ 2.56
TRIM28-204ENST00000594806 THSD7BQ9C0I4 1608 aa31.03■■■□□ 2.56
TRIM28-204ENST00000594806 GRM1Q13255 1194 aa31.03■■■□□ 2.56
TRIM28-204ENST00000594806 CSADQ9Y600 493 aa31.03■■■□□ 2.56
TRIM28-204ENST00000594806 MBD4O95243 580 aa31.02■■■□□ 2.56
TRIM28-204ENST00000594806 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.02■■■□□ 2.56
TRIM28-204ENST00000594806 FOXP4Q8IVH2 680 aaPredicted RBP31.02■■■□□ 2.56
TRIM28-204ENST00000594806 REM2Q8IYK8 340 aaPredicted RBP31.02■■■□□ 2.56
TRIM28-204ENST00000594806 LCORLQ8N3X6 602 aa31.02■■■□□ 2.56
TRIM28-204ENST00000594806 WRNIP1Q96S55 665 aa31.02■■■□□ 2.56
TRIM28-204ENST00000594806 HERC5Q9UII4 1024 aaKnown RBP31.02■■■□□ 2.56
TRIM28-204ENST00000594806 OTOFQ9HC10 1997 aa31.02■■■□□ 2.56
TRIM28-204ENST00000594806 HLA-DOAP06340 250 aa31.01■■■□□ 2.55
TRIM28-204ENST00000594806 CCDC136Q96JN2 1154 aa31.01■■■□□ 2.55
TRIM28-204ENST00000594806 PUS7LQ9H0K6 701 aaKnown RBP31.01■■■□□ 2.55
TRIM28-204ENST00000594806 ARMT1Q9H993 441 aa31.01■■■□□ 2.55
TRIM28-204ENST00000594806 ATP8A2Q9NTI2 1148 aa31.01■■■□□ 2.55
TRIM28-204ENST00000594806 TRIM6-TRIM34B2RNG4 842 aa31■■■□□ 2.55
TRIM28-204ENST00000594806 PDE4AP27815 886 aa31■■■□□ 2.55
TRIM28-204ENST00000594806 SLFNL1Q499Z3 407 aa31■■■□□ 2.55
TRIM28-204ENST00000594806 ZBTB48P10074 688 aaPredicted RBP30.99■■■□□ 2.55
TRIM28-204ENST00000594806 MAP2K1Q02750 393 aaPredicted RBP30.99■■■□□ 2.55
TRIM28-204ENST00000594806 VGLL4Q14135 290 aa30.99■■■□□ 2.55
TRIM28-204ENST00000594806 TTC6Q86TZ1 520 aa30.99■■■□□ 2.55
TRIM28-204ENST00000594806 METTL16Q86W50 562 aaKnown RBP30.99■■■□□ 2.55
TRIM28-204ENST00000594806 OSBP2Q969R2 916 aa30.99■■■□□ 2.55
TRIM28-204ENST00000594806 CLMNQ96JQ2 1002 aa30.99■■■□□ 2.55
TRIM28-204ENST00000594806 CHGBP05060 677 aa30.98■■■□□ 2.55
TRIM28-204ENST00000594806 DDRGK1Q96HY6 314 aa30.98■■■□□ 2.55
TRIM28-204ENST00000594806 PALD1Q9ULE6 856 aa30.98■■■□□ 2.55
TRIM28-204ENST00000594806 AOC2O75106 756 aa30.97■■■□□ 2.55
TRIM28-204ENST00000594806 GNAT2P19087 354 aa30.97■■■□□ 2.55
TRIM28-204ENST00000594806 ZMYM1Q5SVZ6 1142 aa30.97■■■□□ 2.55
TRIM28-204ENST00000594806 NOL9Q5SY16 702 aaKnown RBP30.97■■■□□ 2.55
TRIM28-204ENST00000594806 SPRYD7Q5W111 196 aa30.97■■■□□ 2.55
TRIM28-204ENST00000594806 STRBPQ96SI9 672 aaKnown RBP30.97■■■□□ 2.55
TRIM28-204ENST00000594806 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.97■■■□□ 2.55
TRIM28-204ENST00000594806 DCP1AQ9NPI6 582 aaPredicted RBP30.97■■■□□ 2.55
TRIM28-204ENST00000594806 TAOK2Q9UL54 1235 aa30.97■■■□□ 2.55
TRIM28-204ENST00000594806 NAV1Q8NEY1 1877 aa30.96■■■□□ 2.55
TRIM28-204ENST00000594806 PHF20L1A8MW92 1017 aa30.96■■■□□ 2.55
TRIM28-204ENST00000594806 WNK4Q96J92 1243 aa30.96■■■□□ 2.55
TRIM28-204ENST00000594806 EHD4Q9H223 541 aa30.96■■■□□ 2.55
TRIM28-204ENST00000594806 CTNND1O60716 968 aaKnown RBP30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms