RNA–Protein interactions for RNA: ENST00000590683.2

AP3D1-208, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-208ENST00000590683 RTP1P59025 263 aa11.16□□□□□ -0.62
AP3D1-208ENST00000590683 FASTKD5Q7L8L6 764 aaKnown RBP11.16□□□□□ -0.62
AP3D1-208ENST00000590683 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
AP3D1-208ENST00000590683 HOOK2Q96ED9 719 aa11.16□□□□□ -0.62
AP3D1-208ENST00000590683 PRDM5Q9NQX1 630 aaPredicted RBP11.16□□□□□ -0.62
AP3D1-208ENST00000590683 DOCK1Q14185 1865 aa11.15□□□□□ -0.62
AP3D1-208ENST00000590683 DOCK2Q92608 1830 aa11.15□□□□□ -0.62
AP3D1-208ENST00000590683 CACNB2Q08289 660 aaPredicted RBP11.15□□□□□ -0.62
AP3D1-208ENST00000590683 FAM110CQ1W6H9 321 aa11.15□□□□□ -0.62
AP3D1-208ENST00000590683 NOL9Q5SY16 702 aaKnown RBP11.15□□□□□ -0.62
AP3D1-208ENST00000590683 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
AP3D1-208ENST00000590683 RNPC3Q96LT9 517 aaKnown RBP11.15□□□□□ -0.62
AP3D1-208ENST00000590683 ATP11BQ9Y2G3 1177 aa11.15□□□□□ -0.62
AP3D1-208ENST00000590683 SLC45A1Q9Y2W3 748 aa11.15□□□□□ -0.62
AP3D1-208ENST00000590683 ZHX2Q9Y6X8 837 aa11.15□□□□□ -0.62
AP3D1-208ENST00000590683 RPAP1Q9BWH6 1393 aaPredicted RBP11.15□□□□□ -0.63
AP3D1-208ENST00000590683 MAPK8IP3Q9UPT6 1336 aa11.14□□□□□ -0.63
AP3D1-208ENST00000590683 RIPK4P57078 832 aa11.14□□□□□ -0.63
AP3D1-208ENST00000590683 TFF2Q03403 129 aa11.14□□□□□ -0.63
AP3D1-208ENST00000590683 KHSRPQ92945 711 aaKnown RBP eCLIP11.14□□□□□ -0.63
AP3D1-208ENST00000590683 GAS2L1Q99501 681 aaPredicted RBP11.14□□□□□ -0.63
AP3D1-208ENST00000590683 METTL22Q9BUU2 404 aaPredicted RBP11.14□□□□□ -0.63
AP3D1-208ENST00000590683 PRDM12Q9H4Q4 367 aa11.14□□□□□ -0.63
AP3D1-208ENST00000590683 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
AP3D1-208ENST00000590683 WDFY4Q6ZS81 3184 aa11.14□□□□□ -0.63
AP3D1-208ENST00000590683 GBF1Q92538 1859 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 CHL1O00533 1208 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 KCNQ1P51787 676 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 EPHB4P54760 987 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 ADGRE1Q14246 886 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 TREML2Q5T2D2 321 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 SH3RF1Q7Z6J0 888 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 TDRD7Q8NHU6 1098 aaKnown RBP11.13□□□□□ -0.63
AP3D1-208ENST00000590683 TMOD2Q9NZR1 351 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 AFG3L2Q9Y4W6 797 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 LOC285556D6RIA3 1793 aa11.13□□□□□ -0.63
AP3D1-208ENST00000590683 LRRC37A2A6NM11 1700 aa11.12□□□□□ -0.63
AP3D1-208ENST00000590683 GPR37L1O60883 481 aa11.12□□□□□ -0.63
AP3D1-208ENST00000590683 IGKV5-2P06315 115 aa11.12□□□□□ -0.63
AP3D1-208ENST00000590683 HOXB7P09629 217 aa11.12□□□□□ -0.63
AP3D1-208ENST00000590683 TIFAQ96CG3 184 aa11.12□□□□□ -0.63
AP3D1-208ENST00000590683 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
AP3D1-208ENST00000590683 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.12□□□□□ -0.63
AP3D1-208ENST00000590683 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
AP3D1-208ENST00000590683 CHD9Q3L8U1 2897 aa11.12□□□□□ -0.63
AP3D1-208ENST00000590683 TRIM43BA6NCK2 446 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 ATXN8OSP0DMR3 200 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 PTPRAP18433 802 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 GYG1P46976 350 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 TCP10Q12799 353 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 CCL14Q16627 93 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 CWF19L2Q2TBE0 894 aaKnown RBP11.11□□□□□ -0.63
AP3D1-208ENST00000590683 FKBP1CQ5VVH2 108 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 DUSP27Q5VZP5 1158 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
AP3D1-208ENST00000590683 UBE3BQ7Z3V4 1068 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 TEKT1Q969V4 418 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 TRIM43Q96BQ3 446 aaPredicted RBP11.11□□□□□ -0.63
AP3D1-208ENST00000590683 CXXC1Q9P0U4 656 aaPredicted RBP11.11□□□□□ -0.63
AP3D1-208ENST00000590683 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
AP3D1-208ENST00000590683 TRIM75PA6NK02 468 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 PLIN1O60240 522 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 PEX10O60683 326 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 ZKSCAN1P17029 563 aaPredicted RBP11.1□□□□□ -0.63
AP3D1-208ENST00000590683 IGFBP4P22692 258 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 ITGB8P26012 769 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 PBX2P40425 430 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 NHLH1Q02575 133 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
AP3D1-208ENST00000590683 CCDC84Q86UT8 332 aaPredicted RBP11.1□□□□□ -0.63
AP3D1-208ENST00000590683 SCYL3Q8IZE3 742 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 FAM151AQ8WW52 585 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 ZDHHC15Q96MV8 337 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 PDLIM7Q9NR12 457 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 MAP3K2Q9Y2U5 619 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 DAGLAQ9Y4D2 1042 aa11.1□□□□□ -0.63
AP3D1-208ENST00000590683 USP34Q70CQ2 3546 aa11.09□□□□□ -0.63
AP3D1-208ENST00000590683 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.09□□□□□ -0.63
AP3D1-208ENST00000590683 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.09□□□□□ -0.63
AP3D1-208ENST00000590683 PHF20L1A8MW92 1017 aa11.09□□□□□ -0.63
AP3D1-208ENST00000590683 SMIM22K7EJ46 135 aa11.09□□□□□ -0.63
AP3D1-208ENST00000590683 HDLBPQ00341 1268 aaKnown RBP11.09□□□□□ -0.63
AP3D1-208ENST00000590683 TRIM60Q495X7 471 aa11.09□□□□□ -0.63
AP3D1-208ENST00000590683 PICK1Q9NRD5 415 aa11.09□□□□□ -0.63
AP3D1-208ENST00000590683 IQSEC3Q9UPP2 1182 aaPredicted RBP11.09□□□□□ -0.63
AP3D1-208ENST00000590683 ATAD5Q96QE3 1844 aa11.09□□□□□ -0.63
AP3D1-208ENST00000590683 CHD7Q9P2D1 2997 aa11.09□□□□□ -0.63
AP3D1-208ENST00000590683 GRXCR1A8MXD5 290 aa11.08□□□□□ -0.64
AP3D1-208ENST00000590683 H7C1W4 665 aa11.08□□□□□ -0.64
AP3D1-208ENST00000590683 CSF1RP07333 972 aa11.08□□□□□ -0.64
AP3D1-208ENST00000590683 SLURP2P0DP57 97 aa11.08□□□□□ -0.64
AP3D1-208ENST00000590683 XRCC5P13010 732 aaKnown RBP11.08□□□□□ -0.64
AP3D1-208ENST00000590683 CHAF1AQ13111 956 aaPredicted RBP11.08□□□□□ -0.64
AP3D1-208ENST00000590683 SLC39A5Q6ZMH5 540 aa11.08□□□□□ -0.64
AP3D1-208ENST00000590683 NUDT12Q9BQG2 462 aa11.08□□□□□ -0.64
AP3D1-208ENST00000590683 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
AP3D1-208ENST00000590683 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
AP3D1-208ENST00000590683 ATRNL1Q5VV63 1379 aa11.07□□□□□ -0.64
AP3D1-208ENST00000590683 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
AP3D1-208ENST00000590683 DNM1LO00429 736 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms